BLASTX nr result

ID: Bupleurum21_contig00013195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013195
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA03413.1| EDGP precursor [Daucus carota]                        142   4e-32
pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp gi|384482420|p...   136   2e-30
pdb|3VLA|A Chain A, Crystal Structure Of Edgp                         134   6e-30
ref|XP_003518926.1| PREDICTED: basic 7S globulin-like [Glycine max]   124   1e-26
ref|XP_002302122.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24

>dbj|BAA03413.1| EDGP precursor [Daucus carota]
          Length = 433

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/73 (93%), Positives = 69/73 (94%)
 Frame = +3

Query: 54  TQAQPSFRPKALVVPVKKDASTLQYVTKINQRTPLVSTNLVVDLGGRFLWVDCDNNYVSS 233
           TQAQPSFRP ALVVPVKKDASTLQYVT INQRTPLVS NLVVDLGGRFLWVDCD NYVSS
Sbjct: 18  TQAQPSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSS 77

Query: 234 TYRPVQCRTSQCS 272
           TYRPV+CRTSQCS
Sbjct: 78  TYRPVRCRTSQCS 90


>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp gi|384482420|pdb|3VLB|C
           Chain C, Crystal Structure Of Xeg-Edgp
          Length = 413

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/70 (92%), Positives = 66/70 (94%)
 Frame = +3

Query: 63  QPSFRPKALVVPVKKDASTLQYVTKINQRTPLVSTNLVVDLGGRFLWVDCDNNYVSSTYR 242
           QPSFRP ALVVPVKKDASTLQYVT INQRTPLVS NLVVDLGGRFLWVDCD NYVSSTYR
Sbjct: 1   QPSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYR 60

Query: 243 PVQCRTSQCS 272
           PV+CRTSQCS
Sbjct: 61  PVRCRTSQCS 70


>pdb|3VLA|A Chain A, Crystal Structure Of Edgp
          Length = 413

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/69 (92%), Positives = 65/69 (94%)
 Frame = +3

Query: 66  PSFRPKALVVPVKKDASTLQYVTKINQRTPLVSTNLVVDLGGRFLWVDCDNNYVSSTYRP 245
           PSFRP ALVVPVKKDASTLQYVT INQRTPLVS NLVVDLGGRFLWVDCD NYVSSTYRP
Sbjct: 2   PSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRP 61

Query: 246 VQCRTSQCS 272
           V+CRTSQCS
Sbjct: 62  VRCRTSQCS 70


>ref|XP_003518926.1| PREDICTED: basic 7S globulin-like [Glycine max]
          Length = 435

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/71 (78%), Positives = 65/71 (91%)
 Frame = +3

Query: 60  AQPSFRPKALVVPVKKDASTLQYVTKINQRTPLVSTNLVVDLGGRFLWVDCDNNYVSSTY 239
           AQ SFRP+ALVVPVKKDASTLQY+T+I QRTPLV  NLV+D+GG+FLWVDCDNNYVSSTY
Sbjct: 23  AQQSFRPRALVVPVKKDASTLQYITQIKQRTPLVPENLVLDIGGQFLWVDCDNNYVSSTY 82

Query: 240 RPVQCRTSQCS 272
           RP +C ++QCS
Sbjct: 83  RPARCGSAQCS 93


>ref|XP_002302122.1| predicted protein [Populus trichocarpa] gi|222843848|gb|EEE81395.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/71 (76%), Positives = 61/71 (85%)
 Frame = +3

Query: 60  AQPSFRPKALVVPVKKDASTLQYVTKINQRTPLVSTNLVVDLGGRFLWVDCDNNYVSSTY 239
           AQ SFRPKALVVPV KD++TLQYVT+I QRTP V  NLVVDLGG+FLWVDCD NYVSSTY
Sbjct: 23  AQQSFRPKALVVPVTKDSATLQYVTQIKQRTPQVPINLVVDLGGQFLWVDCDKNYVSSTY 82

Query: 240 RPVQCRTSQCS 272
           RP +C ++ CS
Sbjct: 83  RPARCGSALCS 93


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