BLASTX nr result

ID: Bupleurum21_contig00013178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013178
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635516.1| PREDICTED: uncharacterized protein LOC100853...   174   4e-41
ref|XP_002310575.1| predicted protein [Populus trichocarpa] gi|2...   164   3e-38
emb|CBI25902.3| unnamed protein product [Vitis vinifera]              141   3e-31
ref|XP_004143561.1| PREDICTED: uncharacterized protein LOC101211...   130   5e-28
ref|XP_002864940.1| hypothetical protein ARALYDRAFT_358710 [Arab...   126   1e-26

>ref|XP_003635516.1| PREDICTED: uncharacterized protein LOC100853094 [Vitis vinifera]
          Length = 347

 Score =  174 bits (440), Expect = 4e-41
 Identities = 130/348 (37%), Positives = 176/348 (50%), Gaps = 34/348 (9%)
 Frame = -3

Query: 945  MMSEEKSCDGVFKKRNVLGDVTNLVGKRGFSAISG------GDGENR----KKG--KYVK 802
            MMS + S DG+ K R VL D+TN  GKRGF  ISG      GDG       K+G  ++ K
Sbjct: 1    MMSSDSSADGLRKNRLVLADLTNQTGKRGFQFISGNRGVKSGDGYGNIVDYKQGDLEFAK 60

Query: 801  QVCKDVEIIEINEYSTE------------KSGKERVKEVLNISRPFREI-NDFKDPVSDM 661
            +VC+ VE +   + +T               GK+      N+S     I  + K+P +  
Sbjct: 61   RVCQGVENLMKGKCNTNCGLNGDDEDLSLLKGKKVCGLRENVSSLISNIPKEIKEPSN-- 118

Query: 660  LKDNQKTSPMKNFQSSSIDDVQPSVGDCRVSNIAKPTN--PIVMDGLDVGGNQEKDVDVV 487
            L DN     +      S  +V  +  D   S  + PT   P   +G + G   + D  ++
Sbjct: 119  LLDNSTGIALGGVVIPSDKEVGNASRDSCPSTGSMPTGSEPSESEGYNFGEKCQDDDQII 178

Query: 486  SLAEQNTTVCEQSDVGVGENSENEVGDDNLDS------SKSESVDYFRFPESQESRSSAP 325
            +           SDV     S    G+D   +      ++  SVD+ RF ESQ S+S   
Sbjct: 179  A-----------SDVTQKGPSLGSCGNDGKGAPVVDMPNRYGSVDFSRFAESQGSKSFEL 227

Query: 324  VGCLGLSTDGLSDSPVGIDSIKSCSCSFCTKAAYIWSDLHYQDIKGRLAAIKKSQKEANT 145
              C GL  D  S+  V  + +K+CSC FC KAAYIWSDLHYQDIKGR+AA+KKSQKEA+ 
Sbjct: 228  GRCTGLKNDACSNLNVDANMLKACSCPFCLKAAYIWSDLHYQDIKGRIAALKKSQKEASI 287

Query: 144  LVESSMKKKTVDIYSQENPD-VLKLQSSLMGQWRSLFLHMEGIYSHES 4
            LV+ S + K  D +   NP+   KL+S LMGQWRSLFL M  I +HE+
Sbjct: 288  LVQRSCRAKETDAHGHVNPNKASKLESELMGQWRSLFLSMGDILAHEN 335


>ref|XP_002310575.1| predicted protein [Populus trichocarpa] gi|222853478|gb|EEE91025.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score =  164 bits (416), Expect = 3e-38
 Identities = 128/322 (39%), Positives = 167/322 (51%), Gaps = 19/322 (5%)
 Frame = -3

Query: 909 KKRNVLGDVTNLVGKRGFSAIS--------GGDGENRKKGKYVKQVCKDVEIIEINEYST 754
           K R  LGDVTNL  KRGFS+IS        GG  EN     + KQVC  VE +   +  T
Sbjct: 9   KPRAALGDVTNLPEKRGFSSISDDLGLKSRGGYSENGDS-VFAKQVCLGVENLVKKKCET 67

Query: 753 ---EKSGKERVKEVLNISRPFREIND---FKDPVSDMLKDNQKTSPMKNFQSSSIDDVQP 592
              + SG E+V + L  S   R   D       V+D   D ++TS   N    S+D V+ 
Sbjct: 68  KTGDASGNEKVCDSLTTSSKTRASKDNVAVVSVVADRPSDIKETS---NLIDGSVDLVKS 124

Query: 591 S-VGDCRVSNI--AKPTNPIVMDGLDVGGNQEKDVDVVSLAEQNTTVCEQSDVGVGENSE 421
           S  G   V  +  A   +     GL V  + ++     ++   N  V  Q  VG    S+
Sbjct: 125 SGTGTQSVGEVSCASSGSMYTSSGLCVKDSDDEGKVTSNVMLINPVV--QGLVGGASTSD 182

Query: 420 NEV-GDDNLDSSKSESVDYFRFPESQESRSSAPVGCLGLSTDGLSDSPVGIDSIKSCSCS 244
           + V G   L S K  SV++ R P SQ  +S     C  L  D  ++   G D +K+CSCS
Sbjct: 183 DIVSGVGRLASDKCGSVEWSRLPNSQGLKSFELEKCTTLKGDVCANLNAGADMLKACSCS 242

Query: 243 FCTKAAYIWSDLHYQDIKGRLAAIKKSQKEANTLVESSMKKKTVDIYSQENPD-VLKLQS 67
           FC KAAYIWSDL+YQDIKGR +A+KKSQKEA  LV    + K  DI+SQ N +  L L+S
Sbjct: 243 FCLKAAYIWSDLYYQDIKGRQSALKKSQKEAGILVNKYSRGKQTDIHSQVNSNKSLNLES 302

Query: 66  SLMGQWRSLFLHMEGIYSHESS 1
            L   WRSLF HME ++++ESS
Sbjct: 303 DLTDHWRSLFRHMEDMFANESS 324


>emb|CBI25902.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  141 bits (355), Expect = 3e-31
 Identities = 72/126 (57%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
 Frame = -3

Query: 378 SVDYFRFPESQESRSSAPVGCLGLSTDGLSDSPVGIDSIKSCSCSFCTKAAYIWSDLHYQ 199
           SVD+ RF ESQ S+S     C GL  D  S+  V  + +K+CSC FC KAAYIWSDLHYQ
Sbjct: 141 SVDFSRFAESQGSKSFELGRCTGLKNDACSNLNVDANMLKACSCPFCLKAAYIWSDLHYQ 200

Query: 198 DIKGRLAAIKKSQKEANTLVESSMKKKTVDIYSQENPD-VLKLQSSLMGQWRSLFLHMEG 22
           DIKGR+AA+KKSQKEA+ LV+ S + K  D +   NP+   KL+S LMGQWRSLFL M  
Sbjct: 201 DIKGRIAALKKSQKEASILVQRSCRAKETDAHGHVNPNKASKLESELMGQWRSLFLSMGD 260

Query: 21  IYSHES 4
           I +HE+
Sbjct: 261 ILAHEN 266


>ref|XP_004143561.1| PREDICTED: uncharacterized protein LOC101211834 [Cucumis sativus]
           gi|449504893|ref|XP_004162324.1| PREDICTED:
           uncharacterized LOC101211834 [Cucumis sativus]
          Length = 189

 Score =  130 bits (327), Expect = 5e-28
 Identities = 65/143 (45%), Positives = 92/143 (64%)
 Frame = -3

Query: 429 NSENEVGDDNLDSSKSESVDYFRFPESQESRSSAPVGCLGLSTDGLSDSPVGIDSIKSCS 250
           N E ++    + SS  +S ++ R P S+ S+S     C GL T   +++ +  D +K+CS
Sbjct: 17  NDEKDIDVGIIGSSNHDSSEWSRMPISEGSKSLGLDRCSGLKTSNCANADMYDDLLKTCS 76

Query: 249 CSFCTKAAYIWSDLHYQDIKGRLAAIKKSQKEANTLVESSMKKKTVDIYSQENPDVLKLQ 70
           CSFC KA+YIWSDLHYQDIKGR++A+KKSQK+A+ L + S K+K    + Q N    KL+
Sbjct: 77  CSFCLKASYIWSDLHYQDIKGRISALKKSQKDASILAQKSSKEKET-YHGQGNSSSSKLE 135

Query: 69  SSLMGQWRSLFLHMEGIYSHESS 1
             L GQW SLF HME  ++HE +
Sbjct: 136 LDLCGQWMSLFRHMEDTFAHEGN 158


>ref|XP_002864940.1| hypothetical protein ARALYDRAFT_358710 [Arabidopsis lyrata subsp.
           lyrata] gi|297310775|gb|EFH41199.1| hypothetical protein
           ARALYDRAFT_358710 [Arabidopsis lyrata subsp. lyrata]
          Length = 321

 Score =  126 bits (316), Expect = 1e-26
 Identities = 105/313 (33%), Positives = 154/313 (49%), Gaps = 12/313 (3%)
 Frame = -3

Query: 903 RNVLGDVTNLVGKRGFSAISGG----DGENRKKGKYVKQVCKDVEIIEINEYSTEKSGKE 736
           R  L D+TN+  KRG SAI G      G++  K    +                E SG +
Sbjct: 15  RPALCDMTNVPSKRGLSAILGDLLLKSGDDSGKSLVAR----------------EGSGVK 58

Query: 735 RVKEVLNISRPFREINDFKDPVSDMLKDNQKTSPMKNFQSSSIDDVQPSVGDCRVSNIAK 556
             K +  +             V D++K++ +TS     ++SS DD + S  DC   N   
Sbjct: 59  FSKRLCLV-------------VDDLVKESTRTSDTN--EASSSDD-KISSFDCDSENFDV 102

Query: 555 PTNPIVMDGLDVGGNQEKDVDVVSLAEQNTTVCEQ-SDVGVGENSENEVGDDNL-----D 394
             +    + +D+ G +  +VD  ++ E     CE+ SD+ V  +  + V  ++L      
Sbjct: 103 KESQGETNAVDI-GVEPSNVDGDAVKE----TCEKDSDMNVCASQTDAVTSEDLAMTLFS 157

Query: 393 SSKSESVDYFRFPESQESRSSAPVGCLGLSTDGL--SDSPVGIDSIKSCSCSFCTKAAYI 220
            + SES      P SQ  +S     C  +   G+  +        +KSCSCSFC KAAYI
Sbjct: 158 CNNSESAGLL-VPNSQTVKSFNINRCSNVDGMGIVVNHDMEADQELKSCSCSFCLKAAYI 216

Query: 219 WSDLHYQDIKGRLAAIKKSQKEANTLVESSMKKKTVDIYSQENPDVLKLQSSLMGQWRSL 40
           WSDLHYQDIKGRL+ +KKSQKEA+ L++ + + K +DIY  EN +      + M QW SL
Sbjct: 217 WSDLHYQDIKGRLSVLKKSQKEASGLIQRNDRGKPMDIYGSENSNNSTNTENPMDQWTSL 276

Query: 39  FLHMEGIYSHESS 1
           FL+MEGI + ES+
Sbjct: 277 FLNMEGILARESN 289


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