BLASTX nr result

ID: Bupleurum21_contig00013171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013171
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234305.1| GRAS1 protein [Solanum lycopersicum] gi|8947...   105   5e-21
ref|XP_002272401.1| PREDICTED: scarecrow-like protein 13 [Vitis ...   101   6e-20
ref|XP_003546192.1| PREDICTED: scarecrow-like protein 13-like [G...    83   2e-14
ref|XP_003534887.1| PREDICTED: scarecrow-like protein 13-like [G...    80   1e-13
gb|AFK42187.1| unknown [Medicago truncatula]                           79   3e-13

>ref|NP_001234305.1| GRAS1 protein [Solanum lycopersicum] gi|89474462|gb|ABD72958.1|
           GRAS1 [Solanum lycopersicum]
          Length = 542

 Score =  105 bits (261), Expect = 5e-21
 Identities = 61/109 (55%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
 Frame = -3

Query: 317 NEQFFTLDSSPA-DYVVYDXXXXXXXXXXXXP---QYSQSYRSDQHQSPDNTYGSPVSGS 150
           +EQFFTLDSSPA DYVV D            P   Q S+SY SD H S DNT GSP+SG 
Sbjct: 54  DEQFFTLDSSPATDYVVNDSPPALSVSSNRSPFSPQCSRSYMSDLHHSSDNTCGSPLSGC 113

Query: 149 SMIDDGNALKHILRELESKLLGPESETDDVCSYSFNSATPEVTSLTKYD 3
           S IDDG+ L+H+LRELE+KLLGPES+TDD CS S N    + +S+T+++
Sbjct: 114 SGIDDGD-LRHVLRELENKLLGPESDTDDSCSCSLNDMVSKPSSVTRWN 161


>ref|XP_002272401.1| PREDICTED: scarecrow-like protein 13 [Vitis vinifera]
          Length = 545

 Score =  101 bits (252), Expect = 6e-20
 Identities = 55/111 (49%), Positives = 68/111 (61%), Gaps = 6/111 (5%)
 Frame = -3

Query: 320 YNEQFFTLDSSP--ADYVVYDXXXXXXXXXXXXPQYS----QSYRSDQHQSPDNTYGSPV 159
           YNEQ+FTL+S+P  A Y V D              +S    QSY SD H SPDN  GSP+
Sbjct: 55  YNEQYFTLESAPVTAGYNVCDSSPSAGSISSNRSPFSPQGSQSYLSDPHHSPDNASGSPI 114

Query: 158 SGSSMIDDGNALKHILRELESKLLGPESETDDVCSYSFNSATPEVTSLTKY 6
           SGSS +DDGN L+H LRELE  LLGPES+T D C+ SF S   +  S+ ++
Sbjct: 115 SGSSGVDDGNELRHKLRELELSLLGPESDTTDSCNCSFRSGAHQAASIARW 165


>ref|XP_003546192.1| PREDICTED: scarecrow-like protein 13-like [Glycine max]
          Length = 552

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 56/142 (39%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
 Frame = -3

Query: 401 PYSHFQILXXXXXXXXXXXXD---TPASYHYN-EQFFTLDSSPA--DYVVYDXXXXXXXX 240
           PY+H+QIL                T  S+  + +Q+FTL+SSP   D +  D        
Sbjct: 25  PYTHYQILQSNSCHEIHDNSSSQGTTISFETSKDQYFTLESSPVINDLIGCDSPSYASVS 84

Query: 239 XXXXP---QYSQSYRSDQHQSPDNTYGSPVSGSSMIDDGNALKHILRELESKLLGPESET 69
               P   Q S SY SDQHQS DNTYGSP S  S  DD   LK+ LRELE  LLGP+S+ 
Sbjct: 85  SNRSPFSPQASHSYHSDQHQSSDNTYGSPTSSHSTADDSYELKNKLRELEISLLGPDSDI 144

Query: 68  DDVCSYSFNSATPEVTSLTKYD 3
            D C  S+       + + KY+
Sbjct: 145 VDSCHCSYKGGCHGASPMAKYN 166


>ref|XP_003534887.1| PREDICTED: scarecrow-like protein 13-like [Glycine max]
          Length = 548

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 55/123 (44%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
 Frame = -3

Query: 401 PYSHFQILXXXXXXXXXXXXDTPASYHYN-EQFFTLDSSPA--DYVVYDXXXXXXXXXXX 231
           PY+H+QIL             T  S+  + EQ+FTL+SSPA  D +  D           
Sbjct: 25  PYTHYQILQSNSCHDNSSSQGTTISFETSKEQYFTLESSPAINDLIGCDSPSYASVSSNR 84

Query: 230 XPQYSQSYRSDQHQSPDNTYGSPVSGSSMI-DDGNALKHILRELESKLLGPESETDDV-- 60
            P   Q+  SDQHQS DNTYGSP S  S   DDG  LK+ LRELE  LLGP+S+  D   
Sbjct: 85  SPFSPQASHSDQHQSSDNTYGSPTSAHSRYDDDGYELKNKLRELEISLLGPDSDIVDSWH 144

Query: 59  CSY 51
           CSY
Sbjct: 145 CSY 147


>gb|AFK42187.1| unknown [Medicago truncatula]
          Length = 520

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/58 (68%), Positives = 45/58 (77%)
 Frame = -3

Query: 224 QYSQSYRSDQHQSPDNTYGSPVSGSSMIDDGNALKHILRELESKLLGPESETDDVCSY 51
           Q SQS  SD HQSPDNTYGSP+SG S +DDGN LKH LRE+E+ LLGPE + D V SY
Sbjct: 85  QESQSCHSDHHQSPDNTYGSPISGMSSVDDGNDLKHKLREIENSLLGPE-DFDIVDSY 141


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