BLASTX nr result

ID: Bupleurum21_contig00013169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013169
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530188.1| conserved hypothetical protein [Ricinus comm...   154   2e-35
ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g2942...   122   8e-26
ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...   115   1e-23
dbj|BAC42265.1| unknown protein [Arabidopsis thaliana]                114   2e-23
ref|NP_001042281.1| Os01g0193500 [Oryza sativa Japonica Group] g...   107   3e-21

>ref|XP_002530188.1| conserved hypothetical protein [Ricinus communis]
           gi|223530307|gb|EEF32202.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 460

 Score =  154 bits (388), Expect = 2e-35
 Identities = 98/249 (39%), Positives = 148/249 (59%), Gaps = 2/249 (0%)
 Frame = +3

Query: 3   HSLVELTLKNACLSVDDMHVMPLLTRLMLKNVTILDKHLSKLMECLPCLQVLNLIDSGGD 182
           H L+EL +KN+ LSVD +  MP+LT L L+++ + D++LSK+  C PCL+VLNL+  GG 
Sbjct: 160 HGLLELEVKNSWLSVDGLIPMPVLTSLTLESIRLDDENLSKVNHCFPCLKVLNLVGVGGL 219

Query: 183 TDPKIHHLNLKELKWTLYANFESPDLSSVTIFAPNLTKLELQFVFRIRLSIHAPLLSYCN 362
            +PKIH  +L+  +WT+     S   +S++IFAPNL KLEL  +    L +  PLLS   
Sbjct: 220 REPKIHLYHLRTCRWTV-----SNAPNSLSIFAPNLLKLELNCIEPRSLILETPLLSDFY 274

Query: 363 LALWGADLFNVEKFKTLKTLHLVSWDLHNILSTFPSSITVQNLTLNSSEPGYDLYPQDK- 539
           L++  A+ F V++   LK L L S D+ +++  FPS+ +V+ LT++S  P Y +   +  
Sbjct: 275 LSIRKANKFKVKQLHDLKILQLESTDILSLIRLFPSNSSVERLTVDS--PKYAIQTDEMI 332

Query: 540 KIEFSDVFTIFPNVTSLTLGSEVWSQL-MLYPSEPLAHVAKGLRPRLKEFTAYLELVDID 716
           ++    +F +F NV+SLTL S  WS +   + +  L H  +     LKE    L + DID
Sbjct: 333 RLNLEMLFDVFMNVSSLTLLSAAWSDMEKCFLTNGLRHDME--MKELKEVIVQLVIQDID 390

Query: 717 KTFSFILYI 743
            T SFI  I
Sbjct: 391 VTLSFIFTI 399


>ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus] gi|449503313|ref|XP_004161940.1| PREDICTED:
           F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus]
          Length = 449

 Score =  122 bits (306), Expect = 8e-26
 Identities = 91/246 (36%), Positives = 135/246 (54%)
 Frame = +3

Query: 6   SLVELTLKNACLSVDDMHVMPLLTRLMLKNVTILDKHLSKLMECLPCLQVLNLIDSGGDT 185
           +L+EL LKNA LSVD +H M  L  L L+ + + D+ LS+L    P L+VLNLI  GG  
Sbjct: 156 NLLELELKNAWLSVDGLHRMNSLKYLTLEFIRLDDEDLSELNNNFPHLEVLNLIGVGGLN 215

Query: 186 DPKIHHLNLKELKWTLYANFESPDLSSVTIFAPNLTKLELQFVFRIRLSIHAPLLSYCNL 365
           +PKI  L+LK  KWT+     S    S+ I+AP+L+KLEL+ V    L I  P+LS  + 
Sbjct: 216 EPKIRLLHLKTCKWTV-----SNAPVSLCIYAPSLSKLELKCVKPKFLIIETPMLSDFHF 270

Query: 366 ALWGADLFNVEKFKTLKTLHLVSWDLHNILSTFPSSITVQNLTLNSSEPGYDLYPQDKKI 545
            L  A    V++F  L+ LHL    LH++++TF S+ T++ LTL++ +    +  +  K 
Sbjct: 271 CLEDASGLQVDEFPCLRKLHLHFPRLHSLITTFSSARTLKELTLDTMQRAESI--ESVKF 328

Query: 546 EFSDVFTIFPNVTSLTLGSEVWSQLMLYPSEPLAHVAKGLRPRLKEFTAYLELVDIDKTF 725
               VF IFPN++ L LG  V  +   +          G+R  LK+  + L+   I+   
Sbjct: 329 CLDTVFEIFPNLSFLKLGPGVLLEAETFYQAEGLEGRMGMRD-LKKNLSNLKTNKIELKL 387

Query: 726 SFILYI 743
            FI+ I
Sbjct: 388 PFIISI 393


>ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264516|sp|Q9M0E1.1|FBL77_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g29420
           gi|7269841|emb|CAB79700.1| hypothetical protein
           [Arabidopsis thaliana] gi|109946621|gb|ABG48489.1|
           At4g29420 [Arabidopsis thaliana]
           gi|332660229|gb|AEE85629.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 446

 Score =  115 bits (287), Expect = 1e-23
 Identities = 84/248 (33%), Positives = 135/248 (54%), Gaps = 6/248 (2%)
 Frame = +3

Query: 9   LVELTLKNACLSVDDMHVMPLLTRLMLKNVTILDKHLSKLMECLPCLQVLNLIDSGGDTD 188
           LV+L +KNA LSV  +  MP L  L L+ + + D++L K+ +C P LQ LNLI  GG  +
Sbjct: 153 LVKLEVKNAWLSVVGLTEMPNLRYLTLEFIRLDDENLEKVNDCFPFLQELNLIGVGGLKE 212

Query: 189 PKIHHLNLKELKWTLYANFESPDLSSVTIFAPNLTKLELQFVFRIRLSIHAPLLSYCNLA 368
           P+IH L+LK   WT+     S    S+ I APNL +L+L+      L +  P L  C+L+
Sbjct: 213 PRIHFLHLKSCHWTV-----SNAPLSLAIVAPNLLELKLKCNKPKSLLVETPKLVQCHLS 267

Query: 369 LWGADLFNVEKFKTLKTLHLVSWDLHNILSTFPSSITVQNLTLNSSEPGYDLYPQDKKIE 548
           +  A+  +  +F+ LKTL LVS D++ ++S       ++ L ++S +       Q +++E
Sbjct: 268 VEDAEGVSFGEFQDLKTLELVSPDMYRLISNISFGNKIKKLAVDSVKS----IEQSERLE 323

Query: 549 --FSDVFTIFPNVTSLTLGSEVWSQLML-YPSEPLAHVAKGLRPRLKEFTAYLELVD--- 710
              + +   FP +TSL+L    WS +   + S+      KG    LK+ TA +++ D   
Sbjct: 324 LGLATILKAFPGITSLSLSPRTWSDIETHFQSQGGLGDMKG-TDSLKQITARVQMSDHTN 382

Query: 711 IDKTFSFI 734
           + +T SFI
Sbjct: 383 VHQTVSFI 390


>dbj|BAC42265.1| unknown protein [Arabidopsis thaliana]
          Length = 446

 Score =  114 bits (286), Expect = 2e-23
 Identities = 84/248 (33%), Positives = 135/248 (54%), Gaps = 6/248 (2%)
 Frame = +3

Query: 9   LVELTLKNACLSVDDMHVMPLLTRLMLKNVTILDKHLSKLMECLPCLQVLNLIDSGGDTD 188
           LV+L +KNA LSV  +  MP L  L L+ + + D++L K+ +C P LQ LNLI  GG  +
Sbjct: 153 LVKLEVKNAWLSVVGLTEMPNLRYLTLEFIRLDDENLEKVNDCFPFLQELNLIGVGGLKE 212

Query: 189 PKIHHLNLKELKWTLYANFESPDLSSVTIFAPNLTKLELQFVFRIRLSIHAPLLSYCNLA 368
           P+IH L+LK   WT+     S    S+ I APNL +L+L+      L +  P L  C+L+
Sbjct: 213 PRIHFLHLKSCHWTV-----SNAPLSLAIVAPNLLELKLKCNKPKSLLVETPKLVQCHLS 267

Query: 369 LWGADLFNVEKFKTLKTLHLVSWDLHNILSTFPSSITVQNLTLNSSEPGYDLYPQDKKIE 548
           +  A+  +  +F+ LKTL LVS D++ ++S       ++ L ++S +       Q +++E
Sbjct: 268 VEDAEGVSFGEFQDLKTLELVSPDMYRLISNISFGNKIKKLAVDSVKS----IGQSERLE 323

Query: 549 --FSDVFTIFPNVTSLTLGSEVWSQLML-YPSEPLAHVAKGLRPRLKEFTAYLELVD--- 710
              + +   FP +TSL+L    WS +   + S+      KG    LK+ TA +++ D   
Sbjct: 324 LGLATILKAFPGITSLSLSPRTWSDIETHFQSQGGLGDMKG-TDSLKQITARVQMSDHTN 382

Query: 711 IDKTFSFI 734
           + +T SFI
Sbjct: 383 VHQTVSFI 390


>ref|NP_001042281.1| Os01g0193500 [Oryza sativa Japonica Group]
           gi|113531812|dbj|BAF04195.1| Os01g0193500 [Oryza sativa
           Japonica Group]
          Length = 453

 Score =  107 bits (266), Expect = 3e-21
 Identities = 73/179 (40%), Positives = 101/179 (56%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   HSLVELTLKNACLSVDDMHVMPLLTRLMLKNVTILDKHLSKLMECLPCLQVLNLIDSGGD 182
           HSL++L LKNA LSVD + +MP LT L L+ + + D+ L+KL EC PCLQ+LNLI  GG 
Sbjct: 173 HSLLKLRLKNAWLSVDGLKIMPNLTHLTLEFIRLDDEDLNKLNECFPCLQILNLIGVGGL 232

Query: 183 TDPKIHHLNLKELKWTLYANFESPDLSSVTIFAPNLTKLELQFVFRIRLSIHAPLLSYCN 362
            DPKIH   LK   W +     S    S+TI APNL +LEL+ V    L +  P +    
Sbjct: 233 KDPKIHLHQLKTCHWEV-----SNVPRSLTIRAPNLVRLELKCVRPDMLILDTPSMFTLK 287

Query: 363 LAL--WGADLFNVEKFKTLKTLHLVSWDLHNILSTFPSS--ITVQNLTLNSSEPGYDLY 527
           L +   G ++   +   +LK L + S DL ++L  F  +  IT   L L +S   Y+L+
Sbjct: 288 LTVDKLGPNV-QADGLVSLKNLRIESLDLKSLLQVFAENHDITTLELELPTSTNKYELF 345


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