BLASTX nr result

ID: Bupleurum21_contig00013167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013167
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]      132   7e-29
emb|CBI17535.3| unnamed protein product [Vitis vinifera]              132   7e-29
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei...   132   7e-29
ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotei...   132   1e-28
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p...   130   4e-28

>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
          Length = 532

 Score =  132 bits (333), Expect = 7e-29
 Identities = 64/89 (71%), Positives = 69/89 (77%)
 Frame = +2

Query: 2   VRLIADKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWXXXX 181
           VRL+ DK TNKPRGYAFIEY+HTRDMKAAYKQADG+K+DNRRVLVDVERGRTVPNW    
Sbjct: 184 VRLVTDKSTNKPRGYAFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRR 243

Query: 182 XXXXXXXXXXXXEEVNQRYSGREQHQSGG 268
                       EE+NQRYSGREQ Q GG
Sbjct: 244 LGGGLGTTRVGGEELNQRYSGREQVQPGG 272



 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 38/84 (45%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
 Frame = +2

Query: 554 YEV--AEDDRGRSRDKGYDRDHIDSRRDGDRHGARDKSYDRHLEAEDDPRWYKQNEHGHR 727
           YEV  A++DRG S D+ YD D ++++ D +RHG R+++YD H E EDD  WY+Q++ G +
Sbjct: 390 YEVGDADNDRGGSHDREYDYDKVEAKHDRERHGERERNYD-HAEQEDDRGWYEQSDRGRK 448

Query: 728 HPDFEQENAPYDYYEHRHSRGKYD 799
            P+ E ++  YDYY+H   +G+YD
Sbjct: 449 RPEGEHDHGHYDYYDHYQGQGQYD 472


>emb|CBI17535.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  132 bits (333), Expect = 7e-29
 Identities = 66/89 (74%), Positives = 68/89 (76%)
 Frame = +2

Query: 2   VRLIADKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWXXXX 181
           VRLI DKET+KPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNW    
Sbjct: 167 VRLITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRR 226

Query: 182 XXXXXXXXXXXXEEVNQRYSGREQHQSGG 268
                       EEVN +YSGREQ   GG
Sbjct: 227 LGGGLGTTRVGGEEVNPKYSGREQQPVGG 255


>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
           vinifera]
          Length = 514

 Score =  132 bits (333), Expect = 7e-29
 Identities = 66/89 (74%), Positives = 68/89 (76%)
 Frame = +2

Query: 2   VRLIADKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWXXXX 181
           VRLI DKET+KPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNW    
Sbjct: 167 VRLITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRR 226

Query: 182 XXXXXXXXXXXXEEVNQRYSGREQHQSGG 268
                       EEVN +YSGREQ   GG
Sbjct: 227 LGGGLGTTRVGGEEVNPKYSGREQQPVGG 255



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 38/76 (50%), Positives = 54/76 (71%)
 Frame = +2

Query: 572 DRGRSRDKGYDRDHIDSRRDGDRHGARDKSYDRHLEAEDDPRWYKQNEHGHRHPDFEQEN 751
           DRGRSRDK Y  DH++S+ + +RHG RD+  + H   EDD  WY+Q EHGHR P+ E ++
Sbjct: 377 DRGRSRDKEY-YDHMESKHERERHGERDRDLE-HAGPEDDHGWYEQPEHGHRRPEAEHDD 434

Query: 752 APYDYYEHRHSRGKYD 799
             Y +Y+H+ +RG+YD
Sbjct: 435 EHYKHYDHQ-ARGQYD 449


>ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
           max]
          Length = 481

 Score =  132 bits (331), Expect = 1e-28
 Identities = 64/87 (73%), Positives = 69/87 (79%)
 Frame = +2

Query: 2   VRLIADKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWXXXX 181
           VRL+ADK+TNKPRGYAFIEY+HTRDMKAAYKQADGRK+D RRVLVDVERGRTVPNW    
Sbjct: 170 VRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRR 229

Query: 182 XXXXXXXXXXXXEEVNQRYSGREQHQS 262
                       EEVNQR+SGREQ QS
Sbjct: 230 LGGGLGTTRVGGEEVNQRHSGREQQQS 256



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +2

Query: 554 YEVAEDDRGRSRDKGYDRDHIDSRRDGDRHGARDKSYDRHLEAEDDPRWYKQNEHGHRHP 733
           YEV E DRGRSRD+    + ++S     +HG R+  Y    E EDD     Q EHGHRH 
Sbjct: 360 YEVGETDRGRSRDRESHYNRVES-----KHGERNHDY----EPEDDRGRQNQYEHGHRHA 410

Query: 734 DFEQENAP-YDYYEHRHSRGKY 796
           D + +    YD Y H   RG +
Sbjct: 411 DPDHDTTEHYDPYNHGDDRGDH 432


>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
           communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
           ribonucleoprotein 70 kDa, putative [Ricinus communis]
          Length = 506

 Score =  130 bits (326), Expect = 4e-28
 Identities = 66/89 (74%), Positives = 66/89 (74%)
 Frame = +2

Query: 2   VRLIADKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWXXXX 181
           VRLI DK  NKPRGYAFIEYMHTRDMKAAYKQADGRKLD RRVLVDVERGRTVPNW    
Sbjct: 167 VRLITDKAANKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRR 226

Query: 182 XXXXXXXXXXXXEEVNQRYSGREQHQSGG 268
                       EEVNQR SGRE  QSGG
Sbjct: 227 LGGGLGTTRVGGEEVNQRNSGRELQQSGG 255



 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 40/82 (48%), Positives = 51/82 (62%)
 Frame = +2

Query: 554 YEVAEDDRGRSRDKGYDRDHIDSRRDGDRHGARDKSYDRHLEAEDDPRWYKQNEHGHRHP 733
           YEV + DRGRS D+  D D ++S+ + DR   RD     H E EDD  WY+Q E GHR  
Sbjct: 371 YEVGDHDRGRSHDRESDYDRVESKHERDRRAERDY---EHAEPEDDSGWYEQPEQGHRRQ 427

Query: 734 DFEQENAPYDYYEHRHSRGKYD 799
           D E +   YD+YEHR SRG++D
Sbjct: 428 DAEHDQR-YDHYEHR-SRGQFD 447


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