BLASTX nr result

ID: Bupleurum21_contig00013160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013160
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tu...   112   4e-23
ref|XP_003602366.1| RNA-binding protein [Medicago truncatula] gi...   110   1e-22
ref|XP_003602365.1| RNA-binding protein [Medicago truncatula] gi...   110   1e-22
ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi...   110   1e-22
ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   109   3e-22

>gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
          Length = 269

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/56 (89%), Positives = 55/56 (98%)
 Frame = -1

Query: 307 KAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIKKLDDTEFKNPWTKTYIRVDKYE 140
           KAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAI+KLDDTEF+NPWT+TYIRV +Y+
Sbjct: 139 KAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRVREYK 194


>ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
           gi|355491414|gb|AES72617.1| RNA-binding protein
           [Medicago truncatula]
          Length = 273

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/56 (87%), Positives = 54/56 (96%)
 Frame = -1

Query: 307 KAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIKKLDDTEFKNPWTKTYIRVDKYE 140
           KAGDVCFAEVSRDSEGTFGLVDYTNY+DMKYAI+KLDDTEF+NPW ++YIRV KYE
Sbjct: 145 KAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 200


>ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
           gi|355491413|gb|AES72616.1| RNA-binding protein
           [Medicago truncatula]
          Length = 272

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/56 (87%), Positives = 54/56 (96%)
 Frame = -1

Query: 307 KAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIKKLDDTEFKNPWTKTYIRVDKYE 140
           KAGDVCFAEVSRDSEGTFGLVDYTNY+DMKYAI+KLDDTEF+NPW ++YIRV KYE
Sbjct: 145 KAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 200


>ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
           gi|355491412|gb|AES72615.1| RNA-binding protein
           [Medicago truncatula]
          Length = 380

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/56 (87%), Positives = 54/56 (96%)
 Frame = -1

Query: 307 KAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIKKLDDTEFKNPWTKTYIRVDKYE 140
           KAGDVCFAEVSRDSEGTFGLVDYTNY+DMKYAI+KLDDTEF+NPW ++YIRV KYE
Sbjct: 252 KAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 307


>ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
          Length = 263

 Score =  109 bits (272), Expect = 3e-22
 Identities = 48/56 (85%), Positives = 53/56 (94%)
 Frame = -1

Query: 307 KAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIKKLDDTEFKNPWTKTYIRVDKYE 140
           KAGDVCFAEVSRDSEGTFG+VDYTNY+DMKYAI+KLDDTEF+NPW + YIRV KYE
Sbjct: 144 KAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVRKYE 199


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