BLASTX nr result
ID: Bupleurum21_contig00013150
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00013150 (1028 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing fac... 161 3e-37 ref|XP_003544651.1| PREDICTED: serine/arginine-rich splicing fac... 160 5e-37 ref|NP_001241113.1| uncharacterized protein LOC100790689 [Glycin... 160 5e-37 ref|XP_003588649.1| RNA-binding protein Rsf1 [Medicago truncatul... 157 5e-36 ref|XP_002330789.1| predicted protein [Populus trichocarpa] gi|2... 157 5e-36 >ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1 [Vitis vinifera] gi|296083786|emb|CBI24003.3| unnamed protein product [Vitis vinifera] Length = 181 Score = 161 bits (407), Expect = 3e-37 Identities = 79/103 (76%), Positives = 82/103 (79%) Frame = +1 Query: 1 SLDQRVTERELEDEFRVYGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVE 180 +LD RVTERELEDEFRV+GVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVE Sbjct: 8 NLDPRVTERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVE 67 Query: 181 LSHNSKXXXXXXXXXXXXXXXXXXXSDSKCYECGEPGHFAREC 309 LSHNS+ SD KCYECGEPGHFAREC Sbjct: 68 LSHNSR---GGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 107 >ref|XP_003544651.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine max] Length = 178 Score = 160 bits (405), Expect = 5e-37 Identities = 78/103 (75%), Positives = 82/103 (79%) Frame = +1 Query: 1 SLDQRVTERELEDEFRVYGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVE 180 +LD RVTER+LEDEFRV+GVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVE Sbjct: 8 NLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVE 67 Query: 181 LSHNSKXXXXXXXXXXXXXXXXXXXSDSKCYECGEPGHFAREC 309 LSHNS+ SD KCYECGEPGHFAREC Sbjct: 68 LSHNSR-------GGGGGRGGRSGGSDLKCYECGEPGHFAREC 103 >ref|NP_001241113.1| uncharacterized protein LOC100790689 [Glycine max] gi|255625755|gb|ACU13222.1| unknown [Glycine max] gi|255635722|gb|ACU18210.1| unknown [Glycine max] Length = 178 Score = 160 bits (405), Expect = 5e-37 Identities = 78/103 (75%), Positives = 82/103 (79%) Frame = +1 Query: 1 SLDQRVTERELEDEFRVYGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVE 180 +LD RVTER+LEDEFRV+GVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVE Sbjct: 8 NLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVE 67 Query: 181 LSHNSKXXXXXXXXXXXXXXXXXXXSDSKCYECGEPGHFAREC 309 LSHNS+ SD KCYECGEPGHFAREC Sbjct: 68 LSHNSR-------GGGGGRGGRSGGSDLKCYECGEPGHFAREC 103 >ref|XP_003588649.1| RNA-binding protein Rsf1 [Medicago truncatula] gi|355477697|gb|AES58900.1| RNA-binding protein Rsf1 [Medicago truncatula] Length = 190 Score = 157 bits (396), Expect = 5e-36 Identities = 76/105 (72%), Positives = 82/105 (78%), Gaps = 2/105 (1%) Frame = +1 Query: 1 SLDQRVTERELEDEFRVYGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVE 180 +LD RV+ER+LEDEFRV+GVIRSVWVARRPPGYAFIDFDDRRDAQDAIR+LDGKNGWRVE Sbjct: 8 NLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRDLDGKNGWRVE 67 Query: 181 LSHNSK--XXXXXXXXXXXXXXXXXXXSDSKCYECGEPGHFAREC 309 LSHNS+ SD KCYECGEPGHFAREC Sbjct: 68 LSHNSRSGGGGGGGGGGRGRGGGGGGGSDLKCYECGEPGHFAREC 112 >ref|XP_002330789.1| predicted protein [Populus trichocarpa] gi|222872591|gb|EEF09722.1| predicted protein [Populus trichocarpa] Length = 187 Score = 157 bits (396), Expect = 5e-36 Identities = 74/103 (71%), Positives = 80/103 (77%) Frame = +1 Query: 1 SLDQRVTERELEDEFRVYGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVE 180 +LD RV+ER+LEDEFR +GVIRSVWVARRPPGYAFIDFDD+RDAQDAI ELDGKNGWRVE Sbjct: 8 NLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDGKNGWRVE 67 Query: 181 LSHNSKXXXXXXXXXXXXXXXXXXXSDSKCYECGEPGHFAREC 309 LSHNS+ SD KCYECGEPGHFAREC Sbjct: 68 LSHNSRGGGGGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 110