BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013087
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   154   9e-36
ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|2...   151   8e-35
ref|XP_002526304.1| conserved hypothetical protein [Ricinus comm...   128   5e-28
ref|NP_565253.1| putative E3 ubiquitin-protein ligase RHA2B [Ara...   127   2e-27

>ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Vitis vinifera]
          Length = 162

 Score =  154 bits (389), Expect = 9e-36
 Identities = 78/143 (54%), Positives = 95/143 (66%)
 Frame = -3

Query: 429 MGLQNELTNVSSESLPILLVILIANCVRYLRSLTFTILHTPSLSWFHYDHVVVDDNATDP 250
           MGLQ++L +VSS+S+P+LLV +IANCV Y+RSL   +  +  LS F  D V  +D     
Sbjct: 1   MGLQSQLNDVSSDSIPLLLVAIIANCVAYIRSLLLGLFQSMGLSRFDADEV--EDGLLGA 58

Query: 249 XXXXXXXXXXXAEQLNMNRVFSYSYCTNNNADCVSGSDCIVCLNRFEKNDRVRKLACRHV 70
                      AEQLN+NRVFSY Y  +  A     SDC+VCL R    D+VR+LACRHV
Sbjct: 59  VGSGLASLIVLAEQLNLNRVFSYRYGEDGGA----ASDCVVCLCRLRDGDQVRRLACRHV 114

Query: 69  FHKECLDGWLDHLNFNCPLCRTP 1
           FHKEC DGWLDHLNFNCPLCR+P
Sbjct: 115 FHKECFDGWLDHLNFNCPLCRSP 137


>ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|222863870|gb|EEF01001.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  153 bits (386), Expect = 2e-35
 Identities = 77/145 (53%), Positives = 93/145 (64%), Gaps = 2/145 (1%)
 Frame = -3

Query: 429 MGLQNELTNVSSESLPILLVILIANCVRYLRSLTFTILHTPSLSWFHYDHVVVDDNATDP 250
           MGLQN+L +VSSES+P+LL+ LIANCV  LRS  F++ H+  L      HV+ DD     
Sbjct: 1   MGLQNQLNDVSSESIPLLLIALIANCVACLRSFLFSVFHSVGLHRLDQAHVM-DDGLLGS 59

Query: 249 XXXXXXXXXXXAEQLNMNRVFSYSYCT--NNNADCVSGSDCIVCLNRFEKNDRVRKLACR 76
                      AEQ  +NRVFSY YC   ++N +   GSDC+VCL      D+VR+L C 
Sbjct: 60  IGSGFAGLIVLAEQRKLNRVFSYKYCCGGDSNTNDKGGSDCVVCLCTLRHGDQVRRLDCC 119

Query: 75  HVFHKECLDGWLDHLNFNCPLCRTP 1
           HVFHKEC DGWLDHLNFNCPLCR P
Sbjct: 120 HVFHKECFDGWLDHLNFNCPLCRWP 144


>ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|222852239|gb|EEE89786.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  151 bits (381), Expect = 8e-35
 Identities = 75/144 (52%), Positives = 92/144 (63%), Gaps = 1/144 (0%)
 Frame = -3

Query: 429 MGLQNELTNVSSESLPILLVILIANCVRYLRSLTFTILHTPSLSWFHYDHVVVDDNATDP 250
           MGLQN+L +VSSES+P+LL+  IANCV  LRS  F++ H+  +      HV+ DD     
Sbjct: 1   MGLQNQLNDVSSESIPLLLIAFIANCVACLRSFFFSVFHSVGVHRLDQAHVM-DDRLMGS 59

Query: 249 XXXXXXXXXXXAEQLNMNRVFSYSYCTN-NNADCVSGSDCIVCLNRFEKNDRVRKLACRH 73
                      AEQ  +NRVF+Y YC   ++ +   GSDC+VCL      D+VRKL CRH
Sbjct: 60  MGSGLAGLIVLAEQRKLNRVFAYKYCCGRDDGNDKGGSDCVVCLCTLRDGDQVRKLDCRH 119

Query: 72  VFHKECLDGWLDHLNFNCPLCRTP 1
           VFHKEC DGWLDHLNFNCPLCR P
Sbjct: 120 VFHKECFDGWLDHLNFNCPLCRWP 143


>ref|XP_002526304.1| conserved hypothetical protein [Ricinus communis]
           gi|223534385|gb|EEF36093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  128 bits (322), Expect = 5e-28
 Identities = 71/158 (44%), Positives = 92/158 (58%), Gaps = 15/158 (9%)
 Frame = -3

Query: 429 MGLQNELTNVSSESLPILLVILIANCVRYLRSLTFTILHTPSLSWFHYDHVVVDDNAT-- 256
           MGLQ++L +VSS+S+P+LL+ LIA  + +LRS  F+I H+ +L  F     ++ D     
Sbjct: 1   MGLQSQLNDVSSDSIPLLLLALIAKSIDHLRSFFFSIFHSMALPRFTNSQSILFDEGLLI 60

Query: 255 DPXXXXXXXXXXXAEQLNMNRVFSYSY--CTNNN-----------ADCVSGSDCIVCLNR 115
           D            AEQLN+NR+FSY Y  C  N+           A    GSDC+VCL  
Sbjct: 61  DSMGSGLSSLIVLAEQLNVNRLFSYRYRSCGGNDDNHNRGGAGAGAGGGGGSDCVVCLCA 120

Query: 114 FEKNDRVRKLACRHVFHKECLDGWLDHLNFNCPLCRTP 1
               D+VRKL CRHVFHK+C D WL  L FNCPLCR+P
Sbjct: 121 LSDGDQVRKLDCRHVFHKDCFDDWLRQLKFNCPLCRSP 158


>ref|NP_565253.1| putative E3 ubiquitin-protein ligase RHA2B [Arabidopsis thaliana]
           gi|51316550|sp|Q9ZU51.2|RHA2B_ARATH RecName:
           Full=Probable E3 ubiquitin-protein ligase RHA2B;
           AltName: Full=RING-H2 zinc finger protein RHA2b
           gi|3790571|gb|AAC68672.1| RING-H2 finger protein RHA2b
           [Arabidopsis thaliana] gi|20197589|gb|AAD14516.2|
           RING-H2 finger protein RHA2b [Arabidopsis thaliana]
           gi|98960889|gb|ABF58928.1| At2g01150 [Arabidopsis
           thaliana] gi|330250313|gb|AEC05407.1| putative E3
           ubiquitin-protein ligase RHA2B [Arabidopsis thaliana]
          Length = 147

 Score =  127 bits (318), Expect = 2e-27
 Identities = 67/143 (46%), Positives = 90/143 (62%)
 Frame = -3

Query: 429 MGLQNELTNVSSESLPILLVILIANCVRYLRSLTFTILHTPSLSWFHYDHVVVDDNATDP 250
           MGLQ +L++VSS+S+P++L+ L+A   R++RSL       P         VVV  N +  
Sbjct: 1   MGLQGQLSDVSSDSIPLMLLALLATFFRHVRSLLLFPSSAPV--------VVVTSNLS-- 50

Query: 249 XXXXXXXXXXXAEQLNMNRVFSYSYCTNNNADCVSGSDCIVCLNRFEKNDRVRKLACRHV 70
                      A+QLN+NR+FSY Y  N      + SDCIVCL++ +  + VRKL CRHV
Sbjct: 51  ---------VLADQLNLNRLFSYRYSDN------AASDCIVCLSKLKTGEEVRKLDCRHV 95

Query: 69  FHKECLDGWLDHLNFNCPLCRTP 1
           FHK+CL+GWL HLNFNCPLCR+P
Sbjct: 96  FHKQCLEGWLQHLNFNCPLCRSP 118