BLASTX nr result

ID: Bupleurum21_contig00013083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013083
         (1347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312577.1| predicted protein [Populus trichocarpa] gi|2...   317   4e-84
ref|XP_002284428.1| PREDICTED: MATH domain-containing protein At...   315   2e-83
emb|CAN81604.1| hypothetical protein VITISV_030318 [Vitis vinifera]   312   1e-82
ref|XP_003536854.1| PREDICTED: MATH domain-containing protein At...   305   2e-80
ref|XP_003590107.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   300   6e-79

>ref|XP_002312577.1| predicted protein [Populus trichocarpa] gi|222852397|gb|EEE89944.1|
            predicted protein [Populus trichocarpa]
          Length = 1111

 Score =  317 bits (812), Expect = 4e-84
 Identities = 175/377 (46%), Positives = 240/377 (63%), Gaps = 5/377 (1%)
 Frame = -2

Query: 1343 PGISRPLSAPLIPGNEKCTPVVPMVQTVQSLSRSVSAAGRLGPDPSAATASHVPQSYRNA 1164
            P +SRP SAPL+PG       V +VQT   L+RSVSAAG LGPDPS+AT S+VPQSYRNA
Sbjct: 776  PAMSRPSSAPLVPGPRPTAAPVSLVQTTPLLARSVSAAGWLGPDPSSATRSYVPQSYRNA 835

Query: 1163 MMGNPATTSSAGYNTLSLLPNSSVDSSHSYSQPFAVISSPMCMPQI-SERMDTKSIGSNL 987
            ++GN   +SS+                 ++ QP  ++S+PM +P + S+R+D  ++ S  
Sbjct: 836  IIGNAVGSSSS-----------------AHVQPSTLVSAPMFLPPLNSDRVDPNALQSGF 878

Query: 986  SFGMVSHDVLQNGPQWMDSPRKDINRDNCNPSIQNGPQWMHYQRNTSQSINGD-HSLRSD 810
             FGMV+ DVLQNG QWM+S                       QR+ S+S++ D  SL + 
Sbjct: 879  PFGMVTQDVLQNGRQWMESS----------------------QRDASRSMSSDPSSLVNG 916

Query: 809  MKNFDMDMSVPSRSQDQSTIGFPAGTSGRQNPGVLVDDFPHLDIINDLLDEEHGVIMAAX 630
            ++  D+   + SRSQ+  +  FPA TSG Q PG + D+FPHLDIINDLL++EH V  A+ 
Sbjct: 917  IQKIDLYNPICSRSQEHYSSEFPACTSGCQTPGGVTDEFPHLDIINDLLNDEHAVGKASE 976

Query: 629  XXXXXXXXSNGLRHLNQRFTFPGDVGVSGDLGPTTSSNM-FERTQSYHDGEYHHSYNSNN 453
                     NG   LN++F+FP D+G+S DLG +TSS+  FERT+SYHDG +  SY+S+ 
Sbjct: 977  ASRVFHS--NGPHLLNRQFSFPSDMGISSDLGSSTSSSCRFERTRSYHDGGFQRSYSSSG 1034

Query: 452  GQFDS--NFMHQANLQPYQNGHVDGFIPNQWRMSNSDLSYLSMRSSDNDGFSYHIPEYSN 279
              FD+   F+ QA+  PY NGH+DG IPNQW++S SD+S ++MR++D D + Y  PEYSN
Sbjct: 1035 SHFDTPREFIPQASPLPYANGHIDGLIPNQWQISGSDISLMNMRNADGDSYPYFNPEYSN 1094

Query: 278  LVSSVDGYTVFRPSSGH 228
            + S V+GYTVFRPS+GH
Sbjct: 1095 MASGVNGYTVFRPSNGH 1111


>ref|XP_002284428.1| PREDICTED: MATH domain-containing protein At5g43560-like [Vitis
            vinifera]
          Length = 1146

 Score =  315 bits (807), Expect = 2e-83
 Identities = 179/386 (46%), Positives = 246/386 (63%), Gaps = 14/386 (3%)
 Frame = -2

Query: 1343 PGISRPLSAPLIPGNEKCTPVVPMVQTVQSLSRSVSAAGRLGPDPSAATASHVPQSYRNA 1164
            P +SRP +APLIPG     PVV MVQT   L+RSVSAAGRLGPDPS AT S+VPQSYRNA
Sbjct: 789  PMVSRPSTAPLIPGPRPTAPVVSMVQTTPLLARSVSAAGRLGPDPSPATHSYVPQSYRNA 848

Query: 1163 MMGNPATTSSAGYNTLSLLPNSSV--DSSHSYSQPFAVISSPMCMPQISERMDTKSIGSN 990
            ++GN  ++SS+G++     P+SS   +SS +YSQ   ++SSPM +PQ S+R+D  S+ S 
Sbjct: 849  IIGNSVSSSSSGFSH----PHSSSTGNSSPAYSQLPTLVSSPMFLPQNSDRLDVNSVKSG 904

Query: 989  LSFGMVSHDVLQNGPQWMDSPRKDINRD-NCNPSIQNGPQWMHYQRNTSQSINGDHSLRS 813
             SFGM + D+LQNG QW +  ++D +R  NC PS+ N                       
Sbjct: 905  FSFGMGTQDILQNGAQWTERSQRDASRSTNCGPSMLN----------------------- 941

Query: 812  DMKNFDMDMSVPSRSQDQSTIGFPAGTSGRQNPGVLVDD--FPHLDIINDLLDEEHGVIM 639
            D++N D    V S S++  +  FPAGTSG Q  GV++D+  FPHLDIINDLL++E  V  
Sbjct: 942  DIQNIDFYNPVHSGSREHFSTEFPAGTSGYQTHGVMIDEFPFPHLDIINDLLNDEQ-VGK 1000

Query: 638  AAXXXXXXXXXSNGLRHLNQRFTFPGDVGVSGDLGPTTSSNMFERTQSYHDGEYH----- 474
            AA         SNG   L+++ +FPGD+G++GDLG +TS+  FERT+SYH G  H     
Sbjct: 1001 AARASTSSQSLSNGPHLLSRQRSFPGDMGIAGDLGSSTSACRFERTRSYHVGANHDEVFQ 1060

Query: 473  HSYNSNNGQFD---SNFMHQANLQPYQNGHVDGFIPNQWRMSNSDLSYLSMRSS-DNDGF 306
             +Y S+   FD    +F+ QAN   Y NG +DG IPNQW+++ SD+   + R++ ++DG+
Sbjct: 1061 RNYGSSGSHFDHPLRDFIPQANPPHYANGPIDGLIPNQWQVAGSDIPMFNARNAVESDGY 1120

Query: 305  SYHIPEYSNLVSSVDGYTVFRPSSGH 228
             Y+IP+Y N    +DGYT+FRPS+GH
Sbjct: 1121 PYYIPDYQNPACGIDGYTMFRPSNGH 1146


>emb|CAN81604.1| hypothetical protein VITISV_030318 [Vitis vinifera]
          Length = 837

 Score =  312 bits (800), Expect = 1e-82
 Identities = 176/384 (45%), Positives = 243/384 (63%), Gaps = 12/384 (3%)
 Frame = -2

Query: 1343 PGISRPLSAPLIPGNEKCTPVVPMVQTVQSLSRSVSAAGRLGPDPSAATASHVPQSYRNA 1164
            P +SRP +APLIPG     PVV MVQT   L+RSVSAAGRLGPDPS AT S+VPQSYRNA
Sbjct: 480  PMVSRPSTAPLIPGPRPTAPVVSMVQTTPLLARSVSAAGRLGPDPSPATHSYVPQSYRNA 539

Query: 1163 MMGNPATTSSAGYNTLSLLPNSSVDSSHSYSQPFAVISSPMCMPQISERMDTKSIGSNLS 984
            ++GN  ++SS+G++      +S+  SS +YSQ   ++SSPM +PQ S+R+D  S+ S  S
Sbjct: 540  IIGNSVSSSSSGFSHPH--SSSTASSSPAYSQLPTLVSSPMFLPQNSDRLDVNSVKSGFS 597

Query: 983  FGMVSHDVLQNGPQWMDSPRKDINRD-NCNPSIQNGPQWMHYQRNTSQSINGDHSLRSDM 807
            FGM + D+LQNG QW +  ++D +R  NC PS+ N                       D+
Sbjct: 598  FGMGTQDILQNGAQWTERSQRDASRSTNCGPSMLN-----------------------DI 634

Query: 806  KNFDMDMSVPSRSQDQSTIGFPAGTSGRQNPGVLVDD--FPHLDIINDLLDEEHGVIMAA 633
            +N D    V S S++  +  FPAGTSG Q  GV++D+  FPHLDIINDLL++E  V  AA
Sbjct: 635  QNIDFYNPVHSGSREHFSTEFPAGTSGYQTHGVMIDEFPFPHLDIINDLLNDEQ-VGKAA 693

Query: 632  XXXXXXXXXSNGLRHLNQRFTFPGDVGVSGDLGPTTSSNMFERTQSYHDGEYH-----HS 468
                     SNG   L+++ +FPGD+G++GDLG +TS+  FERT+SYH G  H      +
Sbjct: 694  RTSTSSQSLSNGPHLLSRQRSFPGDMGIAGDLGSSTSACRFERTRSYHVGANHDEVFQRN 753

Query: 467  YNSNNGQFD---SNFMHQANLQPYQNGHVDGFIPNQWRMSNSDLSYLSMRSS-DNDGFSY 300
            Y S+   FD    +F+ QAN   Y NG +DG IPNQW+++ SD+   + R++ ++DG+ Y
Sbjct: 754  YGSSGSHFDHPLRDFIPQANPPHYANGPIDGLIPNQWQVAGSDIPMFNARNAVESDGYPY 813

Query: 299  HIPEYSNLVSSVDGYTVFRPSSGH 228
            +IP+  N    +DGYT+FRPS+GH
Sbjct: 814  YIPDXQNPACGIDGYTMFRPSNGH 837


>ref|XP_003536854.1| PREDICTED: MATH domain-containing protein At5g43560-like [Glycine
            max]
          Length = 1139

 Score =  305 bits (781), Expect = 2e-80
 Identities = 175/374 (46%), Positives = 241/374 (64%), Gaps = 5/374 (1%)
 Frame = -2

Query: 1337 ISRPLSAPLIPGNEKCTP-VVPMVQTVQSLSRSVSAAGRLGPDPSAATASHVPQSYRNAM 1161
            +SRP SAPL+PG  + T  VV MVQT   L+RSVSA  RLGPDPS AT S+VPQSYRNA+
Sbjct: 791  LSRPSSAPLVPGVPRPTAAVVSMVQTAPLLARSVSATARLGPDPSPATHSYVPQSYRNAI 850

Query: 1160 MGNPATTSSAGYNTLSLLPNSSVDSSHSYSQPFAVISSPMCMPQISERMDTKSIGSNLSF 981
            MGNP  +++A     S   +S V+ S  YSQP  ++SSP+ + + S++MD+ +  S++ F
Sbjct: 851  MGNPVVSTAASLPHSS--SSSGVNPSPGYSQP-PMVSSPLFISRSSDKMDSNTSLSDVPF 907

Query: 980  GMVSHDVLQNGPQWMDSPRKDINRDNCNPSIQNGPQWMHYQRNTSQSINGDHSLRSDMKN 801
            GM++ DVLQNGP W+DS +++  R             M Y+           S  +D +N
Sbjct: 908  GMITRDVLQNGPNWIDSSQREAGRS------------MPYE---------PPSRLNDAQN 946

Query: 800  FDMDMSVPSRSQDQSTIGFPAGTSGRQNPGVLVDDFPHLDIINDLLDE--EHGVIMAAXX 627
             D+   + SRS    T  FPA TS  QN G LVD+FPHLDIINDLLDE  EHG+  A+  
Sbjct: 947  LDLFRPIDSRSLGNITSEFPACTSKHQNQGGLVDEFPHLDIINDLLDEPREHGIGKASRA 1006

Query: 626  XXXXXXXSNGLRHLNQRFTFPGDVGVSGDLGPTTSSNMFERTQSYHDGEYHHSYNSNNGQ 447
                   ++G + LN++FTFPGD+G   DLG +TSS  FER++SYHD  +   Y+++   
Sbjct: 1007 SSVFYSLNDGPQLLNRQFTFPGDLGTDDDLGSSTSSCRFERSRSYHDAGFQQGYSTSGRH 1066

Query: 446  FDS--NFMHQANLQPYQNGHVDGFIPNQWRMSNSDLSYLSMRSSDNDGFSYHIPEYSNLV 273
            +DS  +++ QA+   Y NG VDG IPNQW+++ SDLSYL MR+++N  +SY+  +YSN+ 
Sbjct: 1067 YDSLQDYVPQASTLSYGNGKVDGMIPNQWQVAGSDLSYLGMRNTEN-SYSYY-QDYSNMA 1124

Query: 272  SSVDGYTVFRPSSG 231
              V+GYTVFRPS+G
Sbjct: 1125 CGVNGYTVFRPSNG 1138


>ref|XP_003590107.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
            gi|355479155|gb|AES60358.1| Ubiquitin carboxyl-terminal
            hydrolase [Medicago truncatula]
          Length = 1136

 Score =  300 bits (768), Expect = 6e-79
 Identities = 178/380 (46%), Positives = 241/380 (63%), Gaps = 11/380 (2%)
 Frame = -2

Query: 1337 ISRPLSAPLIPGNEKCTPVVPMVQTVQSLSRSVSAAGRLGPDPSAATASHVPQSYRNAMM 1158
            +SRP SAPL+PG  + T  V +VQT   L+RS SA GRLGPDPS AT S+VPQSYRNAMM
Sbjct: 775  MSRPSSAPLVPGGPRPTTSVSVVQTAPPLARSASATGRLGPDPSPATHSNVPQSYRNAMM 834

Query: 1157 GNP--ATTSSAGYNTLSLLPNSSVDSSHSYSQPFAVISSPMCMPQISERMDTKSIGSNLS 984
            GN   +TT+S  ++T S    S V+ S  YSQ  +++SSPM + Q SE M + +  +++ 
Sbjct: 835  GNQIASTTTSFTHSTSS----SGVNPSSGYSQQ-SLVSSPMFLSQSSENMGSMAGQASVP 889

Query: 983  FGMVSHDVLQNGPQWMDSPRKDINRDNCNPSIQNGPQWMHYQRNT--SQSINGDHSLRSD 810
            FGM++ DVLQNG  WM+S +++ +R             MHY+ ++  +   N D     D
Sbjct: 890  FGMLTRDVLQNGLHWMESSQREASRS------------MHYEPSSRLNDVQNLDLFQPVD 937

Query: 809  MKNFDM----DMSVPSRSQDQSTIG--FPAGTSGRQNPGVLVDDFPHLDIINDLLDEEHG 648
             ++FD       +  SR Q+Q  +   F A TS RQN G+L D+FPHLDIINDLLD+EHG
Sbjct: 938  SRSFDQLPNEFQACTSRRQNQGLLADEFQACTSRRQNQGLLADEFPHLDIINDLLDDEHG 997

Query: 647  VIMAAXXXXXXXXXSNGLRHLNQRFTFPGDVGVSGDLGPTTSSNMFERTQSYHDGEYHHS 468
            +  AA         ++G   LN++FTFPG++  + DLG +TSS  FER++SYHD  +   
Sbjct: 998  IGNAAGTSSVFQSFNDGSHMLNRQFTFPGNLDTNDDLGSSTSSCRFERSRSYHDPGFQQG 1057

Query: 467  YNSNNGQFDS-NFMHQANLQPYQNGHVDGFIPNQWRMSNSDLSYLSMRSSDNDGFSYHIP 291
            YN + G FDS    H      Y NG VDG +PNQW+M+ SDLSYL +R+ D DG+SY+  
Sbjct: 1058 YNPSRGHFDSMRDYHPQASTLYGNGKVDGLVPNQWQMAGSDLSYLGLRNPDIDGYSYY-Q 1116

Query: 290  EYSNLVSSVDGYTVFRPSSG 231
            +YSNL + V+GYTVFRPS+G
Sbjct: 1117 DYSNL-TGVNGYTVFRPSNG 1135


Top