BLASTX nr result

ID: Bupleurum21_contig00013077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013077
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33568.3| unnamed protein product [Vitis vinifera]              345   1e-92
ref|XP_002271492.1| PREDICTED: ell-associated factor Eaf isoform...   345   1e-92
ref|XP_002271519.1| PREDICTED: ell-associated factor Eaf isoform...   339   7e-91
gb|ABK95382.1| unknown [Populus trichocarpa]                          276   4e-72
ref|XP_002532640.1| conserved hypothetical protein [Ricinus comm...   276   6e-72

>emb|CBI33568.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  345 bits (885), Expect = 1e-92
 Identities = 184/291 (63%), Positives = 208/291 (71%), Gaps = 5/291 (1%)
 Frame = +2

Query: 92  MAN--INNKPEPNTAPEPDRWYNLNLGSSFKEHRPSSKFCTLRYEFKPASIDKNKTGRLS 265
           MAN  INNK EP+TAPE DRWY+L LGSSFK+   S+KFCTLRYEFKPASIDKN+ G L 
Sbjct: 1   MANKSINNKDEPSTAPESDRWYDLTLGSSFKDPHSSTKFCTLRYEFKPASIDKNQPGSLH 60

Query: 266 KNKDNRVTVEFQNNQQGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVR 445
           KNK+NRVTVEF NNQ GKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVR
Sbjct: 61  KNKENRVTVEFHNNQPGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVR 120

Query: 446 TRG---XXXXXXXXXXXXXXXXXXXXPPVGKTNKFQSANKGTSLPVPVEVERIEIGDFKS 616
             G                       PP+GK  K QS NK  + PVPVEVERI+IG+ +S
Sbjct: 121 LPGESAAAAATTAATTSVVPPVESYSPPIGKGAKLQSFNKSIAHPVPVEVERIDIGNSES 180

Query: 617 LDARPKNEKTVGSPSSHPNQQNTSPEPKIDDLDEQLDILXXXXXXXXXXXXTRTVSEKEF 796
           L  + KN K V  P S PN   TSP  K  +L+E LDI+               V+E+EF
Sbjct: 181 LGTKAKNGKVVDYPPSRPNPSVTSPNSKNYELEEHLDII-NDDNDNFQTAKKENVAEREF 239

Query: 797 HTGIDINIPQQNDTDDEIAEIDVSDDDVNKGPNAAEALREQVNAEGRVTQT 949
           HTGIDIN+PQQND DDEIA++DVSDD+ +KGPNAAEALR QV+AEGR  +T
Sbjct: 240 HTGIDINLPQQNDIDDEIADVDVSDDEADKGPNAAEALRAQVDAEGREEKT 290


>ref|XP_002271492.1| PREDICTED: ell-associated factor Eaf isoform 1 [Vitis vinifera]
           gi|147820042|emb|CAN62810.1| hypothetical protein
           VITISV_025292 [Vitis vinifera]
          Length = 344

 Score =  345 bits (885), Expect = 1e-92
 Identities = 184/291 (63%), Positives = 208/291 (71%), Gaps = 5/291 (1%)
 Frame = +2

Query: 92  MAN--INNKPEPNTAPEPDRWYNLNLGSSFKEHRPSSKFCTLRYEFKPASIDKNKTGRLS 265
           MAN  INNK EP+TAPE DRWY+L LGSSFK+   S+KFCTLRYEFKPASIDKN+ G L 
Sbjct: 1   MANKSINNKDEPSTAPESDRWYDLTLGSSFKDPHSSTKFCTLRYEFKPASIDKNQPGSLH 60

Query: 266 KNKDNRVTVEFQNNQQGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVR 445
           KNK+NRVTVEF NNQ GKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVR
Sbjct: 61  KNKENRVTVEFHNNQPGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVR 120

Query: 446 TRG---XXXXXXXXXXXXXXXXXXXXPPVGKTNKFQSANKGTSLPVPVEVERIEIGDFKS 616
             G                       PP+GK  K QS NK  + PVPVEVERI+IG+ +S
Sbjct: 121 LPGESAAAAATTAATTSVVPPVESYSPPIGKGAKLQSFNKSIAHPVPVEVERIDIGNSES 180

Query: 617 LDARPKNEKTVGSPSSHPNQQNTSPEPKIDDLDEQLDILXXXXXXXXXXXXTRTVSEKEF 796
           L  + KN K V  P S PN   TSP  K  +L+E LDI+               V+E+EF
Sbjct: 181 LGTKAKNGKVVDYPPSRPNPSVTSPNSKNYELEEHLDII-NDDNDNFQTAKKENVAEREF 239

Query: 797 HTGIDINIPQQNDTDDEIAEIDVSDDDVNKGPNAAEALREQVNAEGRVTQT 949
           HTGIDIN+PQQND DDEIA++DVSDD+ +KGPNAAEALR QV+AEGR  +T
Sbjct: 240 HTGIDINLPQQNDIDDEIADVDVSDDEADKGPNAAEALRAQVDAEGREEKT 290


>ref|XP_002271519.1| PREDICTED: ell-associated factor Eaf isoform 2 [Vitis vinifera]
          Length = 343

 Score =  339 bits (869), Expect = 7e-91
 Identities = 184/291 (63%), Positives = 207/291 (71%), Gaps = 5/291 (1%)
 Frame = +2

Query: 92  MAN--INNKPEPNTAPEPDRWYNLNLGSSFKEHRPSSKFCTLRYEFKPASIDKNKTGRLS 265
           MAN  INNK EP+TAPE DRWY+L LGSSFK+   S+KFCTLRYEFKPASIDKN+ G L 
Sbjct: 1   MANKSINNKDEPSTAPESDRWYDLTLGSSFKDPHSSTKFCTLRYEFKPASIDKNQPGSLH 60

Query: 266 KNKDNRVTVEFQNNQQGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVR 445
           KNK+NRVTVEF NNQ GKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVR
Sbjct: 61  KNKENRVTVEFHNNQPGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVR 120

Query: 446 TRG---XXXXXXXXXXXXXXXXXXXXPPVGKTNKFQSANKGTSLPVPVEVERIEIGDFKS 616
             G                       PP+GK  K QS NK  + PVPVEVERI+IG+ +S
Sbjct: 121 LPGESAAAAATTAATTSVVPPVESYSPPIGKGAKLQSFNKSIAHPVPVEVERIDIGNSES 180

Query: 617 LDARPKNEKTVGSPSSHPNQQNTSPEPKIDDLDEQLDILXXXXXXXXXXXXTRTVSEKEF 796
           L  R KN   V  P S PN   TSP  K  +L+E LDI+               V+E+EF
Sbjct: 181 LGIRNKN-VVVDYPPSRPNPSVTSPNSKNYELEEHLDII-NDDNDNFQTAKKENVAEREF 238

Query: 797 HTGIDINIPQQNDTDDEIAEIDVSDDDVNKGPNAAEALREQVNAEGRVTQT 949
           HTGIDIN+PQQND DDEIA++DVSDD+ +KGPNAAEALR QV+AEGR  +T
Sbjct: 239 HTGIDINLPQQNDIDDEIADVDVSDDEADKGPNAAEALRAQVDAEGREEKT 289


>gb|ABK95382.1| unknown [Populus trichocarpa]
          Length = 317

 Score =  276 bits (707), Expect = 4e-72
 Identities = 152/286 (53%), Positives = 183/286 (63%)
 Frame = +2

Query: 92  MANINNKPEPNTAPEPDRWYNLNLGSSFKEHRPSSKFCTLRYEFKPASIDKNKTGRLSKN 271
           MAN N+K EP +AP+PDRWYNL LG SFKE + S+KFCTLRYEFKPASIDK K G   KN
Sbjct: 1   MAN-NSKEEPKSAPQPDRWYNLALGPSFKE-QSSNKFCTLRYEFKPASIDKTKPGLFHKN 58

Query: 272 KDNRVTVEFQNNQQGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVRTR 451
           KDNRV+VEFQNNQ GK K TFEGSSEDYKENDAVLFFDG+TFRLERLHR+VK+LRH+R  
Sbjct: 59  KDNRVSVEFQNNQLGKSKFTFEGSSEDYKENDAVLFFDGQTFRLERLHRSVKQLRHLRLP 118

Query: 452 GXXXXXXXXXXXXXXXXXXXXPPVGKTNKFQSANKGTSLPVPVEVERIEIGDFKSLDARP 631
           G                    PPVGK  K     +     VPVEVERI++G+   L  + 
Sbjct: 119 GESAAAASAQSMLAVEAPGLSPPVGKGAKPVQIGRSAFPTVPVEVERIDVGEPHVLGTKA 178

Query: 632 KNEKTVGSPSSHPNQQNTSPEPKIDDLDEQLDILXXXXXXXXXXXXTRTVSEKEFHTGID 811
            NE     P+  PN   +SP PK D+ +E  DI                 +E++     D
Sbjct: 179 ANEGITEHPTHVPNVSTSSPSPKNDEAEEHQDI-DIEDIFGAGSPDDGNATEEKVDVDFD 237

Query: 812 INIPQQNDTDDEIAEIDVSDDDVNKGPNAAEALREQVNAEGRVTQT 949
           ++ PQQN+TDDEIA++D + D+ +KG NAAEALR Q NA+ R  QT
Sbjct: 238 MHAPQQNNTDDEIADVDDNGDEADKGLNAAEALRAQENADERDEQT 283


>ref|XP_002532640.1| conserved hypothetical protein [Ricinus communis]
           gi|223527631|gb|EEF29743.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 338

 Score =  276 bits (706), Expect = 6e-72
 Identities = 156/290 (53%), Positives = 181/290 (62%), Gaps = 10/290 (3%)
 Frame = +2

Query: 98  NINNKPEPNTAPEPDRWYNLNLGSSFKEHR---PSSKFCTLRYEFKPASIDKNKTGRLSK 268
           N N   EPNTAP+PDRWYN+ LG SFK+H    PS KFCTLRYEFKPASIDKN+ G L K
Sbjct: 6   NNNYNEEPNTAPDPDRWYNITLGPSFKDHHNHHPSPKFCTLRYEFKPASIDKNQPGTLHK 65

Query: 269 NKDNRVTVEFQNNQQGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVRT 448
            K+N+V VE+ NNQ GKPKVTF+G SEDYKENDAVLFFDGE FRLERLHRAVKRLRHVR 
Sbjct: 66  GKNNKVKVEYHNNQYGKPKVTFDGVSEDYKENDAVLFFDGENFRLERLHRAVKRLRHVRL 125

Query: 449 RG-----XXXXXXXXXXXXXXXXXXXXPPVGKTNKFQSANKGTSLPVPVEVERIEIGDFK 613
            G                          P+ K    QS NK  +  +  +VE+  IGD +
Sbjct: 126 PGESAAAAAATAAPATFVAPAVETYLSSPISKLTNQQSFNKDVTHQILAQVEQAGIGDSE 185

Query: 614 SLDARPKNEKTVGSPSSHPNQQNTSPEPKIDDLDEQLDILXXXXXXXXXXXXTRTVSEKE 793
           S  A  K  K +   SS PN     P+ K  + +  LDI+               VS K 
Sbjct: 186 SSGAELKEVKILEILSSPPNPSAIIPDVKDSESEGDLDIV---NDHDDDLNKRANVSVKG 242

Query: 794 FHTG--IDINIPQQNDTDDEIAEIDVSDDDVNKGPNAAEALREQVNAEGR 937
             TG  IDIN+P Q DTDDEIA++D+SDD+V+KGPNAAEALR QVNAEGR
Sbjct: 243 SRTGLDIDINLPHQADTDDEIADVDISDDEVDKGPNAAEALRAQVNAEGR 292


Top