BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013065
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001119113.1| RING/U-box domain-containing protein [Arabid...   149   2e-34
ref|NP_195136.3| RING/U-box domain-containing protein [Arabidops...   149   2e-34
emb|CAA17562.1| putative protein [Arabidopsis thaliana] gi|72703...   149   2e-34
ref|XP_002869176.1| protein binding protein [Arabidopsis lyrata ...   147   9e-34
ref|XP_002518729.1| ssm4 protein, putative [Ricinus communis] gi...   146   2e-33

>ref|NP_001119113.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|332660924|gb|AEE86324.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 1107

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/131 (56%), Positives = 89/131 (67%), Gaps = 16/131 (12%)
 Frame = +3

Query: 57  MEITPAE---LDGVAFTSGDAVKSFDDHAASSSEKKSNDN-------------GKKYYHX 188
           MEI+PA+   + G A +   +  S    ++SSS  +++ N             G +Y   
Sbjct: 1   MEISPADSLSISGAAASEVVSEPSVSSSSSSSSPNQASPNPFSNMDPAVSTATGSRYVDD 60

Query: 189 XXXXXXVCRICRNAGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARKCEVCKHPFSF 368
                 VCRICRN GDA+NPLRYPCACSGSIKFVHQDCLLQWLNHSNAR+CEVCKHPFSF
Sbjct: 61  DEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSF 120

Query: 369 SPVYAENAPTR 401
           SPVYA+NAP+R
Sbjct: 121 SPVYADNAPSR 131


>ref|NP_195136.3| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|332660923|gb|AEE86323.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 1108

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/131 (56%), Positives = 89/131 (67%), Gaps = 16/131 (12%)
 Frame = +3

Query: 57  MEITPAE---LDGVAFTSGDAVKSFDDHAASSSEKKSNDN-------------GKKYYHX 188
           MEI+PA+   + G A +   +  S    ++SSS  +++ N             G +Y   
Sbjct: 1   MEISPADSLSISGAAASEVVSEPSVSSSSSSSSPNQASPNPFSNMDPAVSTATGSRYVDD 60

Query: 189 XXXXXXVCRICRNAGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARKCEVCKHPFSF 368
                 VCRICRN GDA+NPLRYPCACSGSIKFVHQDCLLQWLNHSNAR+CEVCKHPFSF
Sbjct: 61  DEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSF 120

Query: 369 SPVYAENAPTR 401
           SPVYA+NAP+R
Sbjct: 121 SPVYADNAPSR 131


>emb|CAA17562.1| putative protein [Arabidopsis thaliana] gi|7270359|emb|CAB80127.1|
           putative protein [Arabidopsis thaliana]
          Length = 1051

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/131 (56%), Positives = 89/131 (67%), Gaps = 16/131 (12%)
 Frame = +3

Query: 57  MEITPAE---LDGVAFTSGDAVKSFDDHAASSSEKKSNDN-------------GKKYYHX 188
           MEI+PA+   + G A +   +  S    ++SSS  +++ N             G +Y   
Sbjct: 1   MEISPADSLSISGAAASEVVSEPSVSSSSSSSSPNQASPNPFSNMDPAVSTATGSRYVDD 60

Query: 189 XXXXXXVCRICRNAGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARKCEVCKHPFSF 368
                 VCRICRN GDA+NPLRYPCACSGSIKFVHQDCLLQWLNHSNAR+CEVCKHPFSF
Sbjct: 61  DEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSF 120

Query: 369 SPVYAENAPTR 401
           SPVYA+NAP+R
Sbjct: 121 SPVYADNAPSR 131


>ref|XP_002869176.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315012|gb|EFH45435.1| protein binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1108

 Score =  147 bits (371), Expect = 9e-34
 Identities = 74/131 (56%), Positives = 88/131 (67%), Gaps = 16/131 (12%)
 Frame = +3

Query: 57  MEITPAE---LDGVAFTSGDAVKSFDDHAASSSEKKSNDN-------------GKKYYHX 188
           MEI+ AE   + G A +   +  S    ++SSS  +++ N             G +Y   
Sbjct: 1   MEISSAESLSISGAAASEVVSEPSVSSSSSSSSPNQASPNPFSTMDPAVATATGSRYVDD 60

Query: 189 XXXXXXVCRICRNAGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARKCEVCKHPFSF 368
                 VCRICRN GDA+NPLRYPCACSGSIKFVHQDCLLQWLNHSNAR+CEVCKHPFSF
Sbjct: 61  DEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSF 120

Query: 369 SPVYAENAPTR 401
           SPVYA+NAP+R
Sbjct: 121 SPVYADNAPSR 131


>ref|XP_002518729.1| ssm4 protein, putative [Ricinus communis]
           gi|223542110|gb|EEF43654.1| ssm4 protein, putative
           [Ricinus communis]
          Length = 806

 Score =  146 bits (369), Expect = 2e-33
 Identities = 76/128 (59%), Positives = 85/128 (66%), Gaps = 13/128 (10%)
 Frame = +3

Query: 57  MEITPAELDGVAFTSGDAVKSFDDHAASSS-----EKKSNDNG--------KKYYHXXXX 197
           MEI  A       +S DA++      +SSS      ++SN +G         +Y      
Sbjct: 1   MEIAAAPSPNDDTSSNDAIRPSSSSLSSSSISSKNREESNCSGGATAATSAARYEDDDEE 60

Query: 198 XXXVCRICRNAGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARKCEVCKHPFSFSPV 377
              VCRICRN GDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNAR+CEVCKH FSFSPV
Sbjct: 61  EEDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPV 120

Query: 378 YAENAPTR 401
           YAENAPTR
Sbjct: 121 YAENAPTR 128