BLASTX nr result

ID: Bupleurum21_contig00013062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013062
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17184.3| unnamed protein product [Vitis vinifera]              199   8e-49
ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containin...   199   8e-49
emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera]   199   8e-49
ref|XP_002513525.1| nucleic acid binding protein, putative [Rici...   190   5e-46
ref|XP_002313352.1| predicted protein [Populus trichocarpa] gi|2...   180   5e-43

>emb|CBI17184.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  199 bits (507), Expect = 8e-49
 Identities = 121/250 (48%), Positives = 143/250 (57%), Gaps = 17/250 (6%)
 Frame = -3

Query: 1138 IPYQQKRMFGFVTFVYPETVKQILAKGNPHFVCDSRVLVKPYKEKGKLPDKKHHH----- 974
            IPYQQKRMFGFVTFVYPETVK ILAKGNPHFVCDSRVLVKPYKEKGK+P+KK  H     
Sbjct: 305  IPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQQHQQQQQ 364

Query: 973  -----MEMDEFPECFSPTGLDPREPYDLPFGRRMVFNSQDMXXXXXXXXXXXXXXXXXXQ 809
                 +E  E+  C SP+G+DPREPYDL  G RM +N+Q+M                  Q
Sbjct: 365  QQQQQLERGEYSTCSSPSGIDPREPYDLHLGARMFYNTQEMLLRRKLEEQADLQQAIELQ 424

Query: 808  GRRLMNLQLPEMLNHSPGHQLHRHPLA-VIPMPFPPQAYPQIHPSLAHSTDGVPPEVLEG 632
            GRRLMNLQL ++ NH   HQ H H L+   P+  P Q+    + SL   +DG   EV E 
Sbjct: 425  GRRLMNLQLLDLKNHQHQHQHHLHNLSGGAPVASPSQSSIHNNQSLGLPSDGNNQEVPEE 484

Query: 631  DSGNDEG-VAPTVAAD-PQXXXXXXXXXXXXXXGKQNVPDLADSDPTG----SNLEHILP 470
            +S +     +PT AAD P                  N      S+P       +LEHILP
Sbjct: 485  NSSSPAATTSPTAAADKPLRQEVNISCNSNSGNDSGNNSTEESSNPADFDLHESLEHILP 544

Query: 469  DNLFASPKKS 440
            D+LFASP KS
Sbjct: 545  DSLFASPTKS 554


>ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like [Vitis
            vinifera]
          Length = 695

 Score =  199 bits (507), Expect = 8e-49
 Identities = 121/250 (48%), Positives = 143/250 (57%), Gaps = 17/250 (6%)
 Frame = -3

Query: 1138 IPYQQKRMFGFVTFVYPETVKQILAKGNPHFVCDSRVLVKPYKEKGKLPDKKHHH----- 974
            IPYQQKRMFGFVTFVYPETVK ILAKGNPHFVCDSRVLVKPYKEKGK+P+KK  H     
Sbjct: 385  IPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQQHQQQQQ 444

Query: 973  -----MEMDEFPECFSPTGLDPREPYDLPFGRRMVFNSQDMXXXXXXXXXXXXXXXXXXQ 809
                 +E  E+  C SP+G+DPREPYDL  G RM +N+Q+M                  Q
Sbjct: 445  QQQQQLERGEYSTCSSPSGIDPREPYDLHLGARMFYNTQEMLLRRKLEEQADLQQAIELQ 504

Query: 808  GRRLMNLQLPEMLNHSPGHQLHRHPLA-VIPMPFPPQAYPQIHPSLAHSTDGVPPEVLEG 632
            GRRLMNLQL ++ NH   HQ H H L+   P+  P Q+    + SL   +DG   EV E 
Sbjct: 505  GRRLMNLQLLDLKNHQHQHQHHLHNLSGGAPVASPSQSSIHNNQSLGLPSDGNNQEVPEE 564

Query: 631  DSGNDEG-VAPTVAAD-PQXXXXXXXXXXXXXXGKQNVPDLADSDPTG----SNLEHILP 470
            +S +     +PT AAD P                  N      S+P       +LEHILP
Sbjct: 565  NSSSPAATTSPTAAADKPLRQEVNISCNSNSGNDSGNNSTEESSNPADFDLHESLEHILP 624

Query: 469  DNLFASPKKS 440
            D+LFASP KS
Sbjct: 625  DSLFASPTKS 634


>emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera]
          Length = 697

 Score =  199 bits (507), Expect = 8e-49
 Identities = 121/252 (48%), Positives = 143/252 (56%), Gaps = 19/252 (7%)
 Frame = -3

Query: 1138 IPYQQKRMFGFVTFVYPETVKQILAKGNPHFVCDSRVLVKPYKEKGKLPDKKHHH----- 974
            IPYQQKRMFGFVTFVYPETVK ILAKGNPHFVCDSRVLVKPYKEKGK+P+KK  H     
Sbjct: 385  IPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQQHQQQQQ 444

Query: 973  -------MEMDEFPECFSPTGLDPREPYDLPFGRRMVFNSQDMXXXXXXXXXXXXXXXXX 815
                   +E  E+  C SP+G+DPREPYDL  G RM +N+Q+M                 
Sbjct: 445  QQQQQQQLERGEYSTCSSPSGIDPREPYDLHLGARMFYNTQEMLLRRKLEEQADLQQAIE 504

Query: 814  XQGRRLMNLQLPEMLNHSPGHQLHRHPLA-VIPMPFPPQAYPQIHPSLAHSTDGVPPEVL 638
             QGRRLMNLQL ++ NH   HQ H H L+   P+  P Q+    + SL   +DG   EV 
Sbjct: 505  LQGRRLMNLQLLDLKNHQHQHQHHLHNLSGGAPVASPXQSSIHNNQSLGLPSDGNNQEVX 564

Query: 637  EGDSGNDEG-VAPTVAAD-PQXXXXXXXXXXXXXXGKQNVPDLADSDPTG----SNLEHI 476
            E +S +     +PT AAD P                  N      S+P       +LEHI
Sbjct: 565  EENSSSPAATTSPTAAADKPLRQEVNISCNSNSGNDSGNNSTEESSNPADFDLHESLEHI 624

Query: 475  LPDNLFASPKKS 440
            LPD+LFASP KS
Sbjct: 625  LPDSLFASPTKS 636


>ref|XP_002513525.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223547433|gb|EEF48928.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 700

 Score =  190 bits (483), Expect = 5e-46
 Identities = 114/241 (47%), Positives = 137/241 (56%), Gaps = 8/241 (3%)
 Frame = -3

Query: 1138 IPYQQKRMFGFVTFVYPETVKQILAKGNPHFVCDSRVLVKPYKEKGKLPDKKHHH----M 971
            IPYQQKRMFGFVTFVYPETVK ILAKGNPHFVCDSRVLVKPYKEKGK+PDKK  H    M
Sbjct: 400  IPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPDKKQPHQQQQM 459

Query: 970  EMDEFPECFSPTGLDPREPYDLPFGRRMVFNSQDMXXXXXXXXXXXXXXXXXXQGRRLMN 791
            E  ++  C SP+GLD REP+DL  G RM  N+Q+M                  QGRRLMN
Sbjct: 460  ERGDYSACSSPSGLDSREPFDLHLGARMFQNTQEMLLRRKLEEQAELQQAIELQGRRLMN 519

Query: 790  LQLPEMLNHSPGHQLHRHPLAV-IPMPFPPQAYPQIHPSLAHSTDGVPPEVLEGDSGNDE 614
            LQL +  NH+  H    H L+   P+P P  +      +L    DG+  EV E + G  +
Sbjct: 520  LQLLDFKNHN--HHQFLHGLSTGSPVPSPTPSRTPNSQTLIFQPDGIDQEVPEENGGIPD 577

Query: 613  GVAP-TVAADPQXXXXXXXXXXXXXXGKQNVPDLADSDPTG--SNLEHILPDNLFASPKK 443
             VA     AD +                 +  + + ++      +LEHILPDNLF SPKK
Sbjct: 578  AVASRNGVADGELEVNPVSNHSNGNSYNSSTEEKSSTEENDLRESLEHILPDNLFTSPKK 637

Query: 442  S 440
            S
Sbjct: 638  S 638


>ref|XP_002313352.1| predicted protein [Populus trichocarpa] gi|222849760|gb|EEE87307.1|
            predicted protein [Populus trichocarpa]
          Length = 685

 Score =  180 bits (457), Expect = 5e-43
 Identities = 106/240 (44%), Positives = 136/240 (56%), Gaps = 7/240 (2%)
 Frame = -3

Query: 1138 IPYQQKRMFGFVTFVYPETVKQILAKGNPHFVCDSRVLVKPYKEKGKLPDKKH---HHME 968
            IPYQQKRMFGFVTFV+ ETVK ILAKGNPHFVCDSRVLVKPYKEKGK+PDKKH     +E
Sbjct: 386  IPYQQKRMFGFVTFVFAETVKLILAKGNPHFVCDSRVLVKPYKEKGKVPDKKHQQQQQIE 445

Query: 967  MDEFPECFSPTGLDPREPYDLPFGRRMVFNSQDMXXXXXXXXXXXXXXXXXXQGRRLMNL 788
             +E+  C SP+ ++ REP+DL  G RM +N+Q+M                  + RRL+NL
Sbjct: 446  REEYSACPSPSRINCREPFDLHLGGRMFYNTQEMLRRKLEEEADLQQAIELQE-RRLLNL 504

Query: 787  QLPEMLNHSPGHQLHRHPLAVIPMPFPPQAYPQIHPSLAHSTDGVPPEVLEGDSGN--DE 614
            QL ++ NH      H       P+P P   +   + +L    DG+  EV   ++G+  D 
Sbjct: 505  QLLDLKNHRQHRYFHGLSTG-SPLPSPTILHSPNNQTLFFPIDGIDKEVQHAENGSNPDA 563

Query: 613  GVAPTVAADPQXXXXXXXXXXXXXXGKQNVPDLADSDPT--GSNLEHILPDNLFASPKKS 440
              A    AD                  ++  + ++SD +    NLEHILPDNLF SPKKS
Sbjct: 564  AAAQNAVADADQEVSPACNHNDGNGNNRDKEEKSNSDESDLNENLEHILPDNLFGSPKKS 623


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