BLASTX nr result

ID: Bupleurum21_contig00013056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013056
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274343.1| PREDICTED: tubulin-specific chaperone B isof...   314   2e-83
ref|XP_002274425.1| PREDICTED: tubulin-specific chaperone B isof...   310   4e-82
ref|XP_004142648.1| PREDICTED: tubulin-specific chaperone B-like...   306   4e-81
ref|XP_002882657.1| tubulin folding cofactor B [Arabidopsis lyra...   293   6e-77
ref|XP_002529160.1| tubulin-specific chaperone B, putative [Rici...   290   4e-76

>ref|XP_002274343.1| PREDICTED: tubulin-specific chaperone B isoform 1 [Vitis vinifera]
           gi|359482231|ref|XP_003632738.1| PREDICTED:
           tubulin-specific chaperone B [Vitis vinifera]
           gi|297739921|emb|CBI30103.3| unnamed protein product
           [Vitis vinifera]
          Length = 242

 Score =  314 bits (805), Expect = 2e-83
 Identities = 144/186 (77%), Positives = 174/186 (93%)
 Frame = -1

Query: 560 LQVQGDESVLLLISHSNMKSFAAEVRFSLQMTVEAVKEKLWKKCGTSVNSMCLELYDESG 381
           LQ+Q DESV L ++H N+KSF+A+VRFSLQMTVE+VK+KLW+KCGTSVNSMCLELYD++G
Sbjct: 5   LQIQEDESVSLRVTHGNIKSFSADVRFSLQMTVESVKDKLWRKCGTSVNSMCLELYDDTG 64

Query: 380 TKVSILSDNMRPLGFYSPQDGYRLHIIDLDPSSVTSGGWLDDTSLVEKYTISEEAYDKLD 201
            K+S+LSDN+RPLGFYSPQDGYRLH+IDLDPSSVTSGGWL+DTSLVEKY+ISEEAY+KLD
Sbjct: 65  AKISVLSDNLRPLGFYSPQDGYRLHVIDLDPSSVTSGGWLEDTSLVEKYSISEEAYEKLD 124

Query: 200 GTYRKFKEKIAHQIPTNQVSKMSENYMEELCANIKIGDRCQVEPGEKRGVIKFVGRAEAL 21
           GT+RKFKEK+A Q P+   SK+S++YM +LCANIK+GDRC+VEPGEKRGV+KFVGRA++L
Sbjct: 125 GTFRKFKEKLAFQNPSILESKISDHYMGDLCANIKVGDRCEVEPGEKRGVVKFVGRAQSL 184

Query: 20  GPGFWV 3
            PGFWV
Sbjct: 185 APGFWV 190


>ref|XP_002274425.1| PREDICTED: tubulin-specific chaperone B isoform 2 [Vitis vinifera]
          Length = 243

 Score =  310 bits (793), Expect = 4e-82
 Identities = 142/187 (75%), Positives = 175/187 (93%), Gaps = 1/187 (0%)
 Frame = -1

Query: 560 LQVQGDESVLLLISHSNMKSFAAEVRFSLQMTVEAVKEKLWKKCGTSVNSMCLELYDESG 381
           LQ+Q DESV L ++H N+KSF+A+VRFSLQMTVE+VK+KLW+KCGTSVNSMCLELYD++G
Sbjct: 5   LQIQEDESVSLRVTHGNIKSFSADVRFSLQMTVESVKDKLWRKCGTSVNSMCLELYDDTG 64

Query: 380 TKVSILSDNMRPLGFYSPQDGYRLHIIDLDPSSVTSGGWLDDTSLVEKYTISEEAYDKLD 201
            K+S+LSDN+RPLGFYSPQDGYRLH+IDLDPSSVTSGGWL+DTSLVEKY+ISEEAY+KLD
Sbjct: 65  AKISVLSDNLRPLGFYSPQDGYRLHVIDLDPSSVTSGGWLEDTSLVEKYSISEEAYEKLD 124

Query: 200 GTYRKFKEKIAHQIPTNQVS-KMSENYMEELCANIKIGDRCQVEPGEKRGVIKFVGRAEA 24
           GT+RKFKEK+A Q P++ +  ++S++YM +LCANIK+GDRC+VEPGEKRGV+KFVGRA++
Sbjct: 125 GTFRKFKEKLAFQNPSSDLCLQISDHYMGDLCANIKVGDRCEVEPGEKRGVVKFVGRAQS 184

Query: 23  LGPGFWV 3
           L PGFWV
Sbjct: 185 LAPGFWV 191


>ref|XP_004142648.1| PREDICTED: tubulin-specific chaperone B-like [Cucumis sativus]
          Length = 245

 Score =  306 bits (785), Expect = 4e-81
 Identities = 144/185 (77%), Positives = 169/185 (91%)
 Frame = -1

Query: 557 QVQGDESVLLLISHSNMKSFAAEVRFSLQMTVEAVKEKLWKKCGTSVNSMCLELYDESGT 378
           Q++ DESVLL ++H+N+KSF ++VRFSLQM+VE+VKEKLW+KCGTSVNSMCLELYD+SG+
Sbjct: 7   QIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLELYDDSGS 66

Query: 377 KVSILSDNMRPLGFYSPQDGYRLHIIDLDPSSVTSGGWLDDTSLVEKYTISEEAYDKLDG 198
           K+S L+DN  PLGFYSP DGYRLHIIDLDPSSVTSGGWL+DTSLVEK+ ISEEAYDK D 
Sbjct: 67  KISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEAYDKRDD 126

Query: 197 TYRKFKEKIAHQIPTNQVSKMSENYMEELCANIKIGDRCQVEPGEKRGVIKFVGRAEALG 18
           T+RKFKEK+A Q P+   SK+S+NYMEELCANIK+GDRCQVEPGEKRGV+KFVGRAE+L 
Sbjct: 127 TFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVGRAESLA 186

Query: 17  PGFWV 3
           PGFWV
Sbjct: 187 PGFWV 191


>ref|XP_002882657.1| tubulin folding cofactor B [Arabidopsis lyrata subsp. lyrata]
           gi|297328497|gb|EFH58916.1| tubulin folding cofactor B
           [Arabidopsis lyrata subsp. lyrata]
          Length = 243

 Score =  293 bits (749), Expect = 6e-77
 Identities = 138/186 (74%), Positives = 165/186 (88%)
 Frame = -1

Query: 560 LQVQGDESVLLLISHSNMKSFAAEVRFSLQMTVEAVKEKLWKKCGTSVNSMCLELYDESG 381
           LQ++GD+SV L I+H+N+KSF+A+VRFS QM+VEAVKEKLWKKCGTSVNSM LELYD+SG
Sbjct: 6   LQLEGDDSVHLHITHANLKSFSADVRFSPQMSVEAVKEKLWKKCGTSVNSMALELYDDSG 65

Query: 380 TKVSILSDNMRPLGFYSPQDGYRLHIIDLDPSSVTSGGWLDDTSLVEKYTISEEAYDKLD 201
           +KV++LSDN RPLGF+SP DG+RLHIIDLDPSSVT+GGWL+DTSLVEKY ISEE Y K  
Sbjct: 66  SKVAVLSDNSRPLGFFSPFDGFRLHIIDLDPSSVTTGGWLEDTSLVEKYNISEEDYAKRT 125

Query: 200 GTYRKFKEKIAHQIPTNQVSKMSENYMEELCANIKIGDRCQVEPGEKRGVIKFVGRAEAL 21
            ++RKFKEK   QIP    +K  ENYME+LCANIK+GDRCQVEPGEKRG++K+VGRAE+L
Sbjct: 126 DSFRKFKEKRVSQIPAAAEAKTKENYMEDLCANIKVGDRCQVEPGEKRGMVKYVGRAESL 185

Query: 20  GPGFWV 3
           GPG+WV
Sbjct: 186 GPGYWV 191


>ref|XP_002529160.1| tubulin-specific chaperone B, putative [Ricinus communis]
           gi|223531384|gb|EEF33219.1| tubulin-specific chaperone
           B, putative [Ricinus communis]
          Length = 243

 Score =  290 bits (742), Expect = 4e-76
 Identities = 132/185 (71%), Positives = 166/185 (89%)
 Frame = -1

Query: 557 QVQGDESVLLLISHSNMKSFAAEVRFSLQMTVEAVKEKLWKKCGTSVNSMCLELYDESGT 378
           +++GDESV+L I+HSN+K+F+A+VRFSL+ TVE+VKEKLW+KCGTSVNSM L+LYD++ +
Sbjct: 7   KIEGDESVVLRITHSNLKTFSADVRFSLESTVESVKEKLWRKCGTSVNSMTLQLYDDTNS 66

Query: 377 KVSILSDNMRPLGFYSPQDGYRLHIIDLDPSSVTSGGWLDDTSLVEKYTISEEAYDKLDG 198
           K+  LSD+ RPLGFYSP DGYR+H+ID+DPSSVTSGGWL+DTSLVEKYTISEEAY+K  G
Sbjct: 67  KICDLSDDSRPLGFYSPLDGYRIHVIDVDPSSVTSGGWLEDTSLVEKYTISEEAYEKRGG 126

Query: 197 TYRKFKEKIAHQIPTNQVSKMSENYMEELCANIKIGDRCQVEPGEKRGVIKFVGRAEALG 18
           T+RKFKEK+  Q P+    K++ENYME+LCANIK+GDRC+VEPG KRG++KFVGRAE+L 
Sbjct: 127 TFRKFKEKLVSQNPSAFEPKITENYMEDLCANIKLGDRCEVEPGAKRGIVKFVGRAESLA 186

Query: 17  PGFWV 3
           PGFWV
Sbjct: 187 PGFWV 191


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