BLASTX nr result

ID: Bupleurum21_contig00013030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013030
         (1503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28269.3| unnamed protein product [Vitis vinifera]              532   e-148
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...   532   e-148
emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]       530   e-148
ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   504   e-140
ref|XP_004140164.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   504   e-140

>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  532 bits (1370), Expect = e-148
 Identities = 273/359 (76%), Positives = 299/359 (83%), Gaps = 2/359 (0%)
 Frame = +1

Query: 10   PGFTEAVSSPFQTPVSGKSGKAQKVPKNAKFNRT-TYTPSSNVGSPPANNLTPAGPCRYD 186
            PGFTE V+SP QTPVSGK GKAQK  +  K +R+   TP SN GSP  NNLTP GPCRYD
Sbjct: 68   PGFTEVVNSPVQTPVSGKGGKAQKTSRITKCSRSGPQTPVSNAGSP-GNNLTPVGPCRYD 126

Query: 187  SSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQ 366
            SSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQ
Sbjct: 127  SSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQ 186

Query: 367  WKGLDTARPSDVEESVGSLQADVEHLSMEERSLDEQIRETQDKLRDLSEDKNNQRWLFVT 546
            WKGLD +RP +V+E+V SLQ +VE+LS++ER LD QIR+ Q++LRDLSED+NNQ+WLFVT
Sbjct: 187  WKGLDVSRPGEVDENVTSLQEEVENLSIQERRLDAQIRDMQERLRDLSEDENNQKWLFVT 246

Query: 547  EEDIKMLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQ 726
            EEDIK LPCFQ ETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRS+MGPIDVYLVSQ
Sbjct: 247  EEDIKGLPCFQKETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSSMGPIDVYLVSQ 306

Query: 727  FEEKLEESNGVEEPPSLLPTESAVAECQAAPAATVESREVETEPQVEEGHAMCSDANASQ 906
            FEEK EE NG+E PPS  P+ S   E   A   T ESR  E E Q ++ H M SD NASQ
Sbjct: 307  FEEKFEEINGLEAPPS-FPSSSGYNEDPTAAMVTEESRGKEIEIQGQDAHRMSSDLNASQ 365

Query: 907  DVASGIMKIVP-DVDSDADYWLISEGDVSITDMWRAESGVEWNELEPLNSDYMMANIGT 1080
            D  SGIMKIVP DVDSDADYWL+S+ DVSITDMWR E GVEWNEL+ LN DY MAN+ T
Sbjct: 366  DFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPGVEWNELDALNDDYAMANVST 424


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score =  532 bits (1370), Expect = e-148
 Identities = 273/359 (76%), Positives = 299/359 (83%), Gaps = 2/359 (0%)
 Frame = +1

Query: 10   PGFTEAVSSPFQTPVSGKSGKAQKVPKNAKFNRT-TYTPSSNVGSPPANNLTPAGPCRYD 186
            PGFTE V+SP QTPVSGK GKAQK  +  K +R+   TP SN GSP  NNLTP GPCRYD
Sbjct: 79   PGFTEVVNSPVQTPVSGKGGKAQKTSRITKCSRSGPQTPVSNAGSP-GNNLTPVGPCRYD 137

Query: 187  SSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQ 366
            SSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQ
Sbjct: 138  SSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQ 197

Query: 367  WKGLDTARPSDVEESVGSLQADVEHLSMEERSLDEQIRETQDKLRDLSEDKNNQRWLFVT 546
            WKGLD +RP +V+E+V SLQ +VE+LS++ER LD QIR+ Q++LRDLSED+NNQ+WLFVT
Sbjct: 198  WKGLDVSRPGEVDENVTSLQEEVENLSIQERRLDAQIRDMQERLRDLSEDENNQKWLFVT 257

Query: 547  EEDIKMLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQ 726
            EEDIK LPCFQ ETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRS+MGPIDVYLVSQ
Sbjct: 258  EEDIKGLPCFQKETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSSMGPIDVYLVSQ 317

Query: 727  FEEKLEESNGVEEPPSLLPTESAVAECQAAPAATVESREVETEPQVEEGHAMCSDANASQ 906
            FEEK EE NG+E PPS  P+ S   E   A   T ESR  E E Q ++ H M SD NASQ
Sbjct: 318  FEEKFEEINGLEAPPS-FPSSSGYNEDPTAAMVTEESRGKEIEIQGQDAHRMSSDLNASQ 376

Query: 907  DVASGIMKIVP-DVDSDADYWLISEGDVSITDMWRAESGVEWNELEPLNSDYMMANIGT 1080
            D  SGIMKIVP DVDSDADYWL+S+ DVSITDMWR E GVEWNEL+ LN DY MAN+ T
Sbjct: 377  DFVSGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPGVEWNELDALNDDYAMANVST 435


>emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]
          Length = 454

 Score =  530 bits (1364), Expect = e-148
 Identities = 271/358 (75%), Positives = 305/358 (85%), Gaps = 1/358 (0%)
 Frame = +1

Query: 10   PGFTEAVSSPFQTPVSGKSGKAQKVPKNAKFNRT-TYTPSSNVGSPPANNLTPAGPCRYD 186
            PG+TE VSSP QTPVSGK+GK +   + +K NR    TP SNVGSP  NNLTP GPCRYD
Sbjct: 80   PGYTEVVSSPHQTPVSGKAGKGRG-SRISKCNRPGPQTPMSNVGSP-GNNLTPVGPCRYD 137

Query: 187  SSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQ 366
            SSLGL TKKFINLIKHAE+GILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQ
Sbjct: 138  SSLGLGTKKFINLIKHAEEGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQ 197

Query: 367  WKGLDTARPSDVEESVGSLQADVEHLSMEERSLDEQIRETQDKLRDLSEDKNNQRWLFVT 546
            WKGLD +RP +V++SV SLQADVE+LS+EER LDEQIRE Q++LR++SED+NNQ+WLFVT
Sbjct: 198  WKGLDVSRPGEVDDSVTSLQADVENLSIEERRLDEQIREMQERLREMSEDENNQKWLFVT 257

Query: 547  EEDIKMLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQ 726
            EEDIK LPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQ
Sbjct: 258  EEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQ 317

Query: 727  FEEKLEESNGVEEPPSLLPTESAVAECQAAPAATVESREVETEPQVEEGHAMCSDANASQ 906
            FEEK EE +G E PPS +P+ S   E     AA  E+R+ ET+ Q +E H +CSDANA Q
Sbjct: 318  FEEKFEEISGAEPPPS-IPSTSGYNE-DTTTAAKEENRDDETKMQGQETHRICSDANAQQ 375

Query: 907  DVASGIMKIVPDVDSDADYWLISEGDVSITDMWRAESGVEWNELEPLNSDYMMANIGT 1080
            D  SGIMKIVP+VDSDADYWL+S+ DVSITDMWR +SGVEWNEL  ++ DY +AN+GT
Sbjct: 376  DFVSGIMKIVPEVDSDADYWLLSDADVSITDMWRTDSGVEWNELGTIHEDYTVANVGT 433


>ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor E2FB-like
            [Cucumis sativus]
          Length = 462

 Score =  504 bits (1297), Expect = e-140
 Identities = 259/359 (72%), Positives = 287/359 (79%), Gaps = 2/359 (0%)
 Frame = +1

Query: 10   PGFTEAVSSPFQTPVSGKSGKAQKVPKNAKFNRT-TYTPSSNVGSPPANNLTPAGPCRYD 186
            P F E V+ P QTPVS K GK  K  +  K++R+   TP SNVGSP  NNLTPAGPCRYD
Sbjct: 84   PRFXEVVNRPHQTPVSVKGGKGGK-SRLTKYSRSGPQTPISNVGSPSTNNLTPAGPCRYD 142

Query: 187  SSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQ 366
            SSLGLLTKKFINLIK AEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQ
Sbjct: 143  SSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQ 202

Query: 367  WKGLDTARPSDVEESVGSLQADVEHLSMEERSLDEQIRETQDKLRDLSEDKNNQRWLFVT 546
            WKGLD +R  DV+++   LQA+VE+L+MEER LDEQIRE Q++LRDLSED+NNQRWLFVT
Sbjct: 203  WKGLDVSRSGDVDDNYADLQAEVENLTMEERGLDEQIREMQERLRDLSEDENNQRWLFVT 262

Query: 547  EEDIKMLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQ 726
            EEDIK LPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQ
Sbjct: 263  EEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQ 322

Query: 727  FEEKLEESNGVEEPPSLLPTESAVAECQAAPAATVESREVETEPQVEEGHAMCSDANASQ 906
            FE K EE N  E PPS LP+ S + E       T ++R  E E + ++ H MCSD NASQ
Sbjct: 323  FEAKFEEINAAEVPPS-LPSSSGLNEAPTTTLVTEDTRGKEIETREQDVHRMCSDLNASQ 381

Query: 907  DVASGIMKIVPD-VDSDADYWLISEGDVSITDMWRAESGVEWNELEPLNSDYMMANIGT 1080
            D   GIMKIVP  VDSDADYWL+S+ DVSITDMWR E  VEWNEL   + DY +  + +
Sbjct: 382  DFVGGIMKIVPSVVDSDADYWLLSDADVSITDMWRTEPSVEWNELGTFHEDYSIGTVSS 440


>ref|XP_004140164.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor E2FB-like
            [Cucumis sativus]
          Length = 462

 Score =  504 bits (1297), Expect = e-140
 Identities = 257/358 (71%), Positives = 281/358 (78%), Gaps = 1/358 (0%)
 Frame = +1

Query: 10   PGFTEAVSSPFQTPVSGKSGKAQKVPKNAKFNRTTYTPSSNVGSPPANNLTPAGPCRYDS 189
            P F E V+SP QTP S K GK  K            TP SNVGSP  NNLTPAGPCRYDS
Sbjct: 84   PRFXEVVNSPHQTPASVKGGKGSKSRLTKCSRSGPQTPMSNVGSPSTNNLTPAGPCRYDS 143

Query: 190  SLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQW 369
            SLGLLTKKFINLIK AEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQW
Sbjct: 144  SLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQW 203

Query: 370  KGLDTARPSDVEESVGSLQADVEHLSMEERSLDEQIRETQDKLRDLSEDKNNQRWLFVTE 549
            KGLD +R  DV+++   LQA+VE+L+MEER LDEQIRE Q++LRDLSED+NNQRWLFVTE
Sbjct: 204  KGLDVSRSGDVDDNYADLQAEVENLTMEERGLDEQIREMQERLRDLSEDENNQRWLFVTE 263

Query: 550  EDIKMLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQF 729
            EDIK LPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQF
Sbjct: 264  EDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQF 323

Query: 730  EEKLEESNGVEEPPSLLPTESAVAECQAAPAATVESREVETEPQVEEGHAMCSDANASQD 909
            E K EE N  E PPS LP+ S + E       T ++R  E E + ++ H MCSD NASQD
Sbjct: 324  EAKFEEINAAEVPPS-LPSSSGLNEAPTTTLVTEDTRGKEIETREQDVHRMCSDLNASQD 382

Query: 910  VASGIMKIVPD-VDSDADYWLISEGDVSITDMWRAESGVEWNELEPLNSDYMMANIGT 1080
               GIMKIVP  VDSDADYWL+S+ DVSITDMWR E  VEWNEL   + DY +  + +
Sbjct: 383  FVGGIMKIVPSVVDSDADYWLLSDADVSITDMWRTEPSVEWNELGTFHEDYSIGTVSS 440


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