BLASTX nr result

ID: Bupleurum21_contig00013010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013010
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265088.1| PREDICTED: UDP-glucuronate 4-epimerase 6 [Vi...   154   6e-36
emb|CAN83418.1| hypothetical protein VITISV_041351 [Vitis vinifera]   154   6e-36
dbj|BAE71216.1| putative NAD dependent epimerase [Trifolium prat...   149   2e-34
gb|AFK49564.1| unknown [Medicago truncatula]                          144   1e-32
ref|XP_003601662.1| UDP-D-glucuronic acid 4-epimerase [Medicago ...   144   1e-32

>ref|XP_002265088.1| PREDICTED: UDP-glucuronate 4-epimerase 6 [Vitis vinifera]
          Length = 451

 Score =  154 bits (390), Expect = 6e-36
 Identities = 86/144 (59%), Positives = 95/144 (65%), Gaps = 7/144 (4%)
 Frame = -2

Query: 413 LNTTKLLAASSKXXXXXXXXXXXXXXXXXXLNYYPLSXXXXXXXXXTPHRHL-------S 255
           +N+TKL+AASSK                  LNY PLS          PH  L       S
Sbjct: 23  VNSTKLMAASSKLLFRATLLVALVLIFFFTLNYPPLSDN--------PHHVLTHQNFLSS 74

Query: 254 AFYDTGVEWEKQVRRSATPRRPNGFSILVTGAAGFVGTHNSLALKKRGDGVVGLDNFNKY 75
           AFY +G  WEKQVR S+TPRRPNGFS+LVTGA GFVGTH SLALKKRGDGV+GLDNFN Y
Sbjct: 75  AFYGSGASWEKQVRHSSTPRRPNGFSVLVTGAGGFVGTHCSLALKKRGDGVLGLDNFNDY 134

Query: 74  YDPSLKRARQKLLSNQEIFIVEAD 3
           YDPSLKRARQ +LS  +IFIVE D
Sbjct: 135 YDPSLKRARQAMLSKHQIFIVEGD 158


>emb|CAN83418.1| hypothetical protein VITISV_041351 [Vitis vinifera]
          Length = 459

 Score =  154 bits (390), Expect = 6e-36
 Identities = 86/144 (59%), Positives = 95/144 (65%), Gaps = 7/144 (4%)
 Frame = -2

Query: 413 LNTTKLLAASSKXXXXXXXXXXXXXXXXXXLNYYPLSXXXXXXXXXTPHRHL-------S 255
           +N+TKL+AASSK                  LNY PLS          PH  L       S
Sbjct: 23  VNSTKLMAASSKLLFRATLLVALVLIFFFTLNYPPLSDN--------PHHVLTHQNFLSS 74

Query: 254 AFYDTGVEWEKQVRRSATPRRPNGFSILVTGAAGFVGTHNSLALKKRGDGVVGLDNFNKY 75
           AFY +G  WEKQVR S+TPRRPNGFS+LVTGA GFVGTH SLALKKRGDGV+GLDNFN Y
Sbjct: 75  AFYGSGASWEKQVRHSSTPRRPNGFSVLVTGAGGFVGTHCSLALKKRGDGVLGLDNFNDY 134

Query: 74  YDPSLKRARQKLLSNQEIFIVEAD 3
           YDPSLKRARQ +LS  +IFIVE D
Sbjct: 135 YDPSLKRARQAMLSKHQIFIVEGD 158


>dbj|BAE71216.1| putative NAD dependent epimerase [Trifolium pratense]
          Length = 451

 Score =  149 bits (376), Expect = 2e-34
 Identities = 82/137 (59%), Positives = 90/137 (65%)
 Frame = -2

Query: 413 LNTTKLLAASSKXXXXXXXXXXXXXXXXXXLNYYPLSXXXXXXXXXTPHRHLSAFYDTGV 234
           +N+TKLL ASSK                   NY PLS           H   SAF   G 
Sbjct: 23  VNSTKLLNASSKLLFRATLLIALVLVFFFTFNYPPLSDTTSHHFHTHSHFLTSAFGGGGA 82

Query: 233 EWEKQVRRSATPRRPNGFSILVTGAAGFVGTHNSLALKKRGDGVVGLDNFNKYYDPSLKR 54
            WE+QVR SATPRRPNGF++LVTGAAGFVG+H SLALKKRGDGV+GLDNFN YYDPSLKR
Sbjct: 83  -WERQVRHSATPRRPNGFTVLVTGAAGFVGSHCSLALKKRGDGVIGLDNFNNYYDPSLKR 141

Query: 53  ARQKLLSNQEIFIVEAD 3
           ARQ LLS  +IFIVE D
Sbjct: 142 ARQDLLSQHQIFIVEGD 158


>gb|AFK49564.1| unknown [Medicago truncatula]
          Length = 447

 Score =  144 bits (362), Expect = 1e-32
 Identities = 79/137 (57%), Positives = 88/137 (64%)
 Frame = -2

Query: 413 LNTTKLLAASSKXXXXXXXXXXXXXXXXXXLNYYPLSXXXXXXXXXTPHRHLSAFYDTGV 234
           +N+TKLL ASSK                   NY PLS           H   SAF   G 
Sbjct: 23  VNSTKLLNASSKLLFRATLLIALVLVFFFTFNYPPLSDSTNHHFHTHSHFLTSAFGGGGA 82

Query: 233 EWEKQVRRSATPRRPNGFSILVTGAAGFVGTHNSLALKKRGDGVVGLDNFNKYYDPSLKR 54
            WE+ VR SA PRRPNGF++LVTGAAGFVG+H SLALKKRGDGV+GLDNFN YYDPSLKR
Sbjct: 83  -WERHVRHSAIPRRPNGFTVLVTGAAGFVGSHCSLALKKRGDGVIGLDNFNSYYDPSLKR 141

Query: 53  ARQKLLSNQEIFIVEAD 3
           ARQ LL+  +IFIVE D
Sbjct: 142 ARQALLTQHQIFIVEGD 158


>ref|XP_003601662.1| UDP-D-glucuronic acid 4-epimerase [Medicago truncatula]
           gi|355490710|gb|AES71913.1| UDP-D-glucuronic acid
           4-epimerase [Medicago truncatula]
          Length = 447

 Score =  144 bits (362), Expect = 1e-32
 Identities = 79/137 (57%), Positives = 88/137 (64%)
 Frame = -2

Query: 413 LNTTKLLAASSKXXXXXXXXXXXXXXXXXXLNYYPLSXXXXXXXXXTPHRHLSAFYDTGV 234
           +N+TKLL ASSK                   NY PLS           H   SAF   G 
Sbjct: 23  VNSTKLLNASSKLLFRATLLIALVLVFFFTFNYPPLSDSTNHHFHTHSHFLTSAFGGGGA 82

Query: 233 EWEKQVRRSATPRRPNGFSILVTGAAGFVGTHNSLALKKRGDGVVGLDNFNKYYDPSLKR 54
            WE+ VR SA PRRPNGF++LVTGAAGFVG+H SLALKKRGDGV+GLDNFN YYDPSLKR
Sbjct: 83  -WERHVRHSAIPRRPNGFTVLVTGAAGFVGSHCSLALKKRGDGVIGLDNFNSYYDPSLKR 141

Query: 53  ARQKLLSNQEIFIVEAD 3
           ARQ LL+  +IFIVE D
Sbjct: 142 ARQALLTQHQIFIVEGD 158


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