BLASTX nr result

ID: Bupleurum21_contig00013005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013005
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera]          320   3e-85
ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis ...   320   3e-85
ref|XP_002311060.1| predicted protein [Populus trichocarpa] gi|2...   320   3e-85
ref|XP_002316399.1| predicted protein [Populus trichocarpa] gi|2...   318   7e-85
ref|XP_002534016.1| Pectate lyase precursor, putative [Ricinus c...   318   9e-85

>gb|ADU02586.1| pectate lyase-like protein 1 [Vitis vinifera]
          Length = 496

 Score =  320 bits (819), Expect = 3e-85
 Identities = 155/236 (65%), Positives = 179/236 (75%), Gaps = 5/236 (2%)
 Frame = -2

Query: 695 VNLTLSHQHPNPEAVVQQVQRRILASTSK-----VEINDQQSCGTGNPIDDCWRCDPNWG 531
           +NLTL HQHPNPE VV +VQRR+  S S+     V+ ND  SC TGNP+DDCWRCDPNW 
Sbjct: 26  LNLTLPHQHPNPEVVVDEVQRRLNVSISRRQVLSVQENDGSSCLTGNPVDDCWRCDPNWQ 85

Query: 530 SNRQRLADCAIXXXXXXXXXXXGQIYMVTDSSDNDVAEPKPGTLRFAAIQVEPLWIIFLA 351
           +NRQRLADC I           GQ Y+VTDSSD D   P PGTLR A IQ +PLWI F  
Sbjct: 86  NNRQRLADCGIGFGQDAMGGKGGQFYVVTDSSDEDPINPAPGTLRHAVIQTQPLWITFST 145

Query: 350 DMQIKLSHELIVSSFKTIDGRGANVYITGNGCITLQDVSNVIIHNIHVYNCNPSGSSDIR 171
           +M IKL +ELIV+SFKTIDGRGANV+ITG GC+TLQ VSNVIIH +HV++C PSG++DIR
Sbjct: 146 NMLIKLKYELIVNSFKTIDGRGANVHITGRGCMTLQYVSNVIIHGVHVHHCVPSGNADIR 205

Query: 170 LSPTQVEHKGKSDGDGISISASRNIWVDHCAVSHCTDGLIDVTMGSTAITISNNYF 3
            SPT V  +GKSDGDGISI  SR IW+DHC++S+C DGLID  MGST ITISNNYF
Sbjct: 206 SSPTHVGWRGKSDGDGISIFGSRKIWIDHCSLSYCRDGLIDAIMGSTGITISNNYF 261


>ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera]
           gi|296085972|emb|CBI31413.3| unnamed protein product
           [Vitis vinifera]
          Length = 496

 Score =  320 bits (819), Expect = 3e-85
 Identities = 155/236 (65%), Positives = 179/236 (75%), Gaps = 5/236 (2%)
 Frame = -2

Query: 695 VNLTLSHQHPNPEAVVQQVQRRILASTSK-----VEINDQQSCGTGNPIDDCWRCDPNWG 531
           +NLTL HQHPNPE VV +VQRR+  S S+     V+ ND  SC TGNP+DDCWRCDPNW 
Sbjct: 26  LNLTLPHQHPNPEVVVDEVQRRLNVSISRRQVLSVQENDGSSCLTGNPVDDCWRCDPNWQ 85

Query: 530 SNRQRLADCAIXXXXXXXXXXXGQIYMVTDSSDNDVAEPKPGTLRFAAIQVEPLWIIFLA 351
           +NRQRLADC I           GQ Y+VTDSSD D   P PGTLR A IQ +PLWI F  
Sbjct: 86  NNRQRLADCGIGFGLDAMGGKGGQFYVVTDSSDEDPINPAPGTLRHAVIQTQPLWITFST 145

Query: 350 DMQIKLSHELIVSSFKTIDGRGANVYITGNGCITLQDVSNVIIHNIHVYNCNPSGSSDIR 171
           +M IKL +ELIV+SFKTIDGRGANV+ITG GC+TLQ VSNVIIH +HV++C PSG++DIR
Sbjct: 146 NMLIKLKYELIVNSFKTIDGRGANVHITGRGCMTLQYVSNVIIHGVHVHHCVPSGNADIR 205

Query: 170 LSPTQVEHKGKSDGDGISISASRNIWVDHCAVSHCTDGLIDVTMGSTAITISNNYF 3
            SPT V  +GKSDGDGISI  SR IW+DHC++S+C DGLID  MGST ITISNNYF
Sbjct: 206 SSPTHVGWRGKSDGDGISIFGSRKIWIDHCSLSYCRDGLIDAIMGSTGITISNNYF 261


>ref|XP_002311060.1| predicted protein [Populus trichocarpa] gi|222850880|gb|EEE88427.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  320 bits (819), Expect = 3e-85
 Identities = 154/247 (62%), Positives = 191/247 (77%), Gaps = 9/247 (3%)
 Frame = -2

Query: 716 YVSGNTIVNLTLSHQHPNPEAVVQQVQRRIL------ASTSK---VEINDQQSCGTGNPI 564
           ++   T  NLTL HQHP+PEAV + V+R+ L      AS S+   + I ++  C TGNPI
Sbjct: 20  FIIETTAFNLTLPHQHPDPEAVAEDVKRQDLYIHLVNASLSRRNLLSIQEKDQCQTGNPI 79

Query: 563 DDCWRCDPNWGSNRQRLADCAIXXXXXXXXXXXGQIYMVTDSSDNDVAEPKPGTLRFAAI 384
           DDCWRCDPNW +NRQRLADCAI           GQIY+VTDSSD++ A P PGTLR+A I
Sbjct: 80  DDCWRCDPNWANNRQRLADCAIGFGQGTLGGRGGQIYVVTDSSDHNPANPTPGTLRYAVI 139

Query: 383 QVEPLWIIFLADMQIKLSHELIVSSFKTIDGRGANVYITGNGCITLQDVSNVIIHNIHVY 204
           Q +PLWIIF +DM IKL HELI +S+KTIDGRGANV+ITGNGCITLQ V+++IIHNIHV+
Sbjct: 140 QDQPLWIIFSSDMVIKLKHELIFNSYKTIDGRGANVHITGNGCITLQHVTHIIIHNIHVH 199

Query: 203 NCNPSGSSDIRLSPTQVEHKGKSDGDGISISASRNIWVDHCAVSHCTDGLIDVTMGSTAI 24
           +C PSG+++I  SPT V  +G+SDGDGISIS S+ IW+DHC++S+CTDGLID  +GSTAI
Sbjct: 200 HCKPSGNTNIASSPTHVGQRGESDGDGISISGSQKIWIDHCSLSYCTDGLIDAILGSTAI 259

Query: 23  TISNNYF 3
           TISNN+F
Sbjct: 260 TISNNHF 266


>ref|XP_002316399.1| predicted protein [Populus trichocarpa] gi|222865439|gb|EEF02570.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  318 bits (816), Expect = 7e-85
 Identities = 151/241 (62%), Positives = 187/241 (77%), Gaps = 3/241 (1%)
 Frame = -2

Query: 716 YVSGNTIVNLTLSHQHPNPEAVVQQVQRRILASTSK---VEINDQQSCGTGNPIDDCWRC 546
           ++   T  NLTL HQHP+PEAV + V+RR+ AS S+   + I ++  C TGNPIDDCWRC
Sbjct: 20  FIVETTAFNLTLPHQHPDPEAVAEDVKRRVNASLSRRHLLSIQEKDQCQTGNPIDDCWRC 79

Query: 545 DPNWGSNRQRLADCAIXXXXXXXXXXXGQIYMVTDSSDNDVAEPKPGTLRFAAIQVEPLW 366
           + NW +NRQRLADCAI           GQIY+VTDSSD D A PKPGTLR+  IQ +PLW
Sbjct: 80  NSNWANNRQRLADCAIGFGQGSLGGRGGQIYVVTDSSDYDPANPKPGTLRYGVIQDQPLW 139

Query: 365 IIFLADMQIKLSHELIVSSFKTIDGRGANVYITGNGCITLQDVSNVIIHNIHVYNCNPSG 186
           IIF ++M IKL HELI +S+KTIDGRGANV+ITGNGCITLQ VS++IIHNIHV++C PSG
Sbjct: 140 IIFSSNMVIKLKHELIFNSYKTIDGRGANVHITGNGCITLQYVSHIIIHNIHVHHCKPSG 199

Query: 185 SSDIRLSPTQVEHKGKSDGDGISISASRNIWVDHCAVSHCTDGLIDVTMGSTAITISNNY 6
           +++I  SPT V  +G+SDGDGISI  ++ IW+DHC++S+CTDGLID  MGST ITISNN+
Sbjct: 200 NTNIAASPTHVGWRGRSDGDGISIFGAQKIWIDHCSLSYCTDGLIDAIMGSTGITISNNH 259

Query: 5   F 3
           F
Sbjct: 260 F 260


>ref|XP_002534016.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223525981|gb|EEF28369.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 503

 Score =  318 bits (815), Expect = 9e-85
 Identities = 149/236 (63%), Positives = 183/236 (77%), Gaps = 3/236 (1%)
 Frame = -2

Query: 701 TIVNLTLSHQHPNPEAVVQQVQRRILASTSKVEIND---QQSCGTGNPIDDCWRCDPNWG 531
           T  NL+L HQHP+PE++ Q VQR I AS S+ ++     +  C TGNPIDDCWRCDPNW 
Sbjct: 26  TSFNLSLPHQHPDPESIAQDVQRTINASVSRRQLLSTLPKDQCQTGNPIDDCWRCDPNWA 85

Query: 530 SNRQRLADCAIXXXXXXXXXXXGQIYMVTDSSDNDVAEPKPGTLRFAAIQVEPLWIIFLA 351
           +NRQRLADC I           GQIY+VTDSSD+D + P PGTLR+  IQ EPLWIIF +
Sbjct: 86  NNRQRLADCTIGFGQGSLGGRGGQIYVVTDSSDHDPSNPTPGTLRYGVIQNEPLWIIFAS 145

Query: 350 DMQIKLSHELIVSSFKTIDGRGANVYITGNGCITLQDVSNVIIHNIHVYNCNPSGSSDIR 171
            M IKL HELI +S+KTIDGRGANV+ITGNGC+TLQ VS++IIHNIH+++C PSG+++I 
Sbjct: 146 SMTIKLKHELIFNSYKTIDGRGANVHITGNGCLTLQYVSHIIIHNIHIHHCKPSGNTNIA 205

Query: 170 LSPTQVEHKGKSDGDGISISASRNIWVDHCAVSHCTDGLIDVTMGSTAITISNNYF 3
            SPT V ++G+SDGDGISI  S+ IW+DHC++S+CTDGLID  MGST ITISNNYF
Sbjct: 206 ASPTHVGYRGRSDGDGISIFGSQKIWIDHCSLSYCTDGLIDAIMGSTGITISNNYF 261


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