BLASTX nr result

ID: Bupleurum21_contig00013003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013003
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514206.1| arginyl-tRNA synthetase, putative [Ricinus c...   364   8e-99
ref|XP_004135677.1| PREDICTED: arginine--tRNA ligase, cytoplasmi...   361   9e-98
ref|XP_002301499.1| predicted protein [Populus trichocarpa] gi|2...   352   4e-95
ref|NP_194360.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis ...   343   2e-92
emb|CAB11469.1| arginyl-tRNA synthetase [Arabidopsis thaliana]        339   4e-91

>ref|XP_002514206.1| arginyl-tRNA synthetase, putative [Ricinus communis]
           gi|223546662|gb|EEF48160.1| arginyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 592

 Score =  364 bits (935), Expect = 8e-99
 Identities = 178/228 (78%), Positives = 201/228 (88%), Gaps = 2/228 (0%)
 Frame = +1

Query: 19  MAT--EEDEYVASLKQQLAKLFESSLRTIVPDETAVEPLVAVCDPKFGDYQCNNAMSLWT 192
           MAT  E ++ V +LK+Q+AKLFE+SLR  VP E  VEPLVA C  KFGDYQCNNAMSLW+
Sbjct: 1   MATNAENEDNVGNLKKQIAKLFEASLRETVPSEPDVEPLVAACTAKFGDYQCNNAMSLWS 60

Query: 193 KIKGKGTEFKGPQPLGQAIRSNLPKSEMIESCSVAGPGFVNVILSKKWIAKSIHKMLLDG 372
           KIKGK TEFKGP  +GQAI  NLP SE+IESCSVAGPGFVNV+LSKKW++K I KML+DG
Sbjct: 61  KIKGKNTEFKGPPAVGQAIMKNLPPSEVIESCSVAGPGFVNVVLSKKWMSKKIQKMLIDG 120

Query: 373 IEIWAPKLSVKRAVIDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVEVLRRNHVGDW 552
           I+ WAPKL VKRAV+DFSSPNIAKEMHVGHLRSTIIGDTLARMLEFS V+VLRRNHVGDW
Sbjct: 121 IDSWAPKLLVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSKVDVLRRNHVGDW 180

Query: 553 GTQFGMLIEFLFEKFPDWENANDQAIGDLEAFYKASKQRFDSDIAFKE 696
           GTQFGMLIEFLFEKFP++E+ N++AIGDL+AFYKASKQRFD+D  FKE
Sbjct: 181 GTQFGMLIEFLFEKFPNFEDVNERAIGDLQAFYKASKQRFDADSEFKE 228


>ref|XP_004135677.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Cucumis
           sativus] gi|449489808|ref|XP_004158422.1| PREDICTED:
           arginine--tRNA ligase, cytoplasmic-like [Cucumis
           sativus]
          Length = 590

 Score =  361 bits (926), Expect = 9e-98
 Identities = 174/226 (76%), Positives = 196/226 (86%)
 Frame = +1

Query: 19  MATEEDEYVASLKQQLAKLFESSLRTIVPDETAVEPLVAVCDPKFGDYQCNNAMSLWTKI 198
           MATEED  V ++K+QLAK+F+ SLR  VPDET VEPLVA C  KFGDYQCNNAM LW+KI
Sbjct: 1   MATEEDN-VGNIKRQLAKIFDVSLRATVPDETDVEPLVAACAGKFGDYQCNNAMGLWSKI 59

Query: 199 KGKGTEFKGPQPLGQAIRSNLPKSEMIESCSVAGPGFVNVILSKKWIAKSIHKMLLDGIE 378
           KGKGT+F+GP  +GQ I  NLP SE+IES SVAGPGFVNV++SK WIAK+I  ML+DGI+
Sbjct: 60  KGKGTQFRGPPSVGQTIMKNLPPSEIIESSSVAGPGFVNVVISKNWIAKTIQNMLIDGID 119

Query: 379 IWAPKLSVKRAVIDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVEVLRRNHVGDWGT 558
            W+P+L  KRAV+DFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNV+VLRRNHVGDWGT
Sbjct: 120 TWSPRLPFKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGDWGT 179

Query: 559 QFGMLIEFLFEKFPDWENANDQAIGDLEAFYKASKQRFDSDIAFKE 696
           QFGMLIEFLFEKFP+WE   + AIGDL+ FYKASKQRFDSD AFKE
Sbjct: 180 QFGMLIEFLFEKFPNWEEVTETAIGDLQTFYKASKQRFDSDPAFKE 225


>ref|XP_002301499.1| predicted protein [Populus trichocarpa] gi|222843225|gb|EEE80772.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score =  352 bits (903), Expect = 4e-95
 Identities = 171/223 (76%), Positives = 192/223 (86%), Gaps = 1/223 (0%)
 Frame = +1

Query: 31  EDEYVASLKQQLAKLFESSLRTIVPDETAVEPLVAVCDPKFGDYQCNNAMSLWTKIKGK- 207
           E E   +LKQ+LAKLF+ SL   VP E  +EPLVA C  KFGDYQCNNAM LW+KIKG+ 
Sbjct: 4   EQENAGNLKQKLAKLFQLSLEATVPGEPDIEPLVAACTAKFGDYQCNNAMGLWSKIKGRP 63

Query: 208 GTEFKGPQPLGQAIRSNLPKSEMIESCSVAGPGFVNVILSKKWIAKSIHKMLLDGIEIWA 387
           G EF+GP  +GQAI  NLP+SEMIESCSVAGPGFVNV+LSK W+AK+I KML+DGIE WA
Sbjct: 64  GIEFRGPPAVGQAIMKNLPQSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWA 123

Query: 388 PKLSVKRAVIDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVEVLRRNHVGDWGTQFG 567
           PKLS+KRAV+DFSSPNIAKEMHVGHLRSTIIGDTLA MLEFSNVEVLRRNHVGDWGTQFG
Sbjct: 124 PKLSIKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLASMLEFSNVEVLRRNHVGDWGTQFG 183

Query: 568 MLIEFLFEKFPDWENANDQAIGDLEAFYKASKQRFDSDIAFKE 696
           MLIEFLFEKFP++E+ N+ AIGDL+AFYK SKQRFD D  FK+
Sbjct: 184 MLIEFLFEKFPNFEDVNETAIGDLQAFYKESKQRFDVDAEFKD 226


>ref|NP_194360.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana]
           gi|2632105|emb|CAB11468.1| arginyl-tRNA synthetase
           [Arabidopsis thaliana] gi|4539426|emb|CAB38959.1|
           arginyl-tRNA synthetase [Arabidopsis thaliana]
           gi|7269482|emb|CAB79485.1| arginyl-tRNA synthetase
           [Arabidopsis thaliana] gi|332659782|gb|AEE85182.1|
           Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana]
          Length = 642

 Score =  343 bits (879), Expect = 2e-92
 Identities = 169/233 (72%), Positives = 196/233 (84%), Gaps = 1/233 (0%)
 Frame = +1

Query: 1   AKSTSIMATEEDEYVASLKQQLAKLFESSLRTIVPDETAVEPLVAVCD-PKFGDYQCNNA 177
           AKS   MA  E E+  +LK+QLAKLF+ SL+  VPDE +VEPLVA     KFGDYQCNNA
Sbjct: 47  AKSVVAMAANE-EFTGNLKRQLAKLFDVSLKLTVPDEPSVEPLVAASALGKFGDYQCNNA 105

Query: 178 MSLWTKIKGKGTEFKGPQPLGQAIRSNLPKSEMIESCSVAGPGFVNVILSKKWIAKSIHK 357
           M LW+ IKGKGT+FKGP  +GQA+  +LP SEM+ESCSVAGPGF+NV+LS KW+AKSI  
Sbjct: 106 MGLWSIIKGKGTQFKGPPAVGQALVKSLPTSEMVESCSVAGPGFINVVLSAKWMAKSIEN 165

Query: 358 MLLDGIEIWAPKLSVKRAVIDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVEVLRRN 537
           ML+DG++ WAP LSVKRAV+DFSSPNIAKEMHVGHLRSTIIGDTLARMLE+S+VEVLRRN
Sbjct: 166 MLIDGVDTWAPTLSVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRN 225

Query: 538 HVGDWGTQFGMLIEFLFEKFPDWENANDQAIGDLEAFYKASKQRFDSDIAFKE 696
           HVGDWGTQFGMLIE+LFEKFPD ++  + AIGDL+ FYKASK +FD D AFKE
Sbjct: 226 HVGDWGTQFGMLIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKE 278


>emb|CAB11469.1| arginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 590

 Score =  339 bits (869), Expect = 4e-91
 Identities = 163/222 (73%), Positives = 191/222 (86%), Gaps = 1/222 (0%)
 Frame = +1

Query: 34  DEYVASLKQQLAKLFESSLRTIVPDETAVEPLVAVCD-PKFGDYQCNNAMSLWTKIKGKG 210
           +E+  +LK+QLAKLF+ SL+  VPDE +VEPLVA     KFGDYQCNNAM LW+ IKGKG
Sbjct: 5   EEFTGNLKRQLAKLFDVSLKLTVPDEPSVEPLVAASALGKFGDYQCNNAMGLWSIIKGKG 64

Query: 211 TEFKGPQPLGQAIRSNLPKSEMIESCSVAGPGFVNVILSKKWIAKSIHKMLLDGIEIWAP 390
           T+FKGP  +GQA+  +LP SEM+ESCSVAGPGF+NV+LS KW+AKSI  ML+DG++ WAP
Sbjct: 65  TQFKGPPAVGQALVKSLPTSEMVESCSVAGPGFINVVLSAKWMAKSIENMLIDGVDTWAP 124

Query: 391 KLSVKRAVIDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVEVLRRNHVGDWGTQFGM 570
            LSVKRAV+DFSSPNIAKEMHVGHLRSTIIGDTLARMLE+S+VEVLRRNHVGDWGTQFGM
Sbjct: 125 TLSVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVGDWGTQFGM 184

Query: 571 LIEFLFEKFPDWENANDQAIGDLEAFYKASKQRFDSDIAFKE 696
           LIE+LFEKFPD ++  + AIGDL+ FYKASK +FD D AFKE
Sbjct: 185 LIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKE 226


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