BLASTX nr result

ID: Bupleurum21_contig00012976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012976
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512988.1| conserved hypothetical protein [Ricinus comm...    60   2e-14
ref|XP_002313013.1| predicted protein [Populus trichocarpa] gi|2...    53   3e-12
ref|XP_002886229.1| hypothetical protein ARALYDRAFT_900313 [Arab...    45   3e-10
ref|NP_565388.1| uncharacterized protein [Arabidopsis thaliana] ...    45   4e-10
ref|NP_973473.1| uncharacterized protein [Arabidopsis thaliana] ...    45   4e-10

>ref|XP_002512988.1| conserved hypothetical protein [Ricinus communis]
           gi|223547999|gb|EEF49491.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 174

 Score = 59.7 bits (143), Expect(2) = 2e-14
 Identities = 33/69 (47%), Positives = 47/69 (68%)
 Frame = -3

Query: 322 MAVCKRLVHLGIDSAICLSKFESSTAPKLYGTATTTRNSGVNRFDYRRISQVVNLNGSRA 143
           MA+ KR + LG +S+   + F    +     +++++ +S  NRFDYR+ISQ+VN NG RA
Sbjct: 1   MALTKRAIQLGSNSSFYFTAFRLIHSSS---SSSSSSSSIANRFDYRQISQLVNPNGKRA 57

Query: 142 FLVDTLALV 116
           FLVDTLALV
Sbjct: 58  FLVDTLALV 66



 Score = 43.9 bits (102), Expect(2) = 2e-14
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -2

Query: 74  VRRLEAQGVPSKQAEAITAAITEV 3
           VR LEAQGVPSKQAEAIT+AITEV
Sbjct: 66  VRSLEAQGVPSKQAEAITSAITEV 89


>ref|XP_002313013.1| predicted protein [Populus trichocarpa] gi|222849421|gb|EEE86968.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 52.8 bits (125), Expect(2) = 3e-12
 Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
 Frame = -3

Query: 322 MAVCKRLVHLGIDSAICLSKFESSTAPKLYGTATTTRNSGVNRFDYRRISQVVNLNGS-R 146
           MA+C R+V  G++SAI  +K  +           ++ +S  NRFDYR ISQ+V  N + R
Sbjct: 1   MALCSRVVRSGVNSAIFFAKSRAINP--------SSSSSFGNRFDYRHISQLVRPNNNKR 52

Query: 145 AFLVDTLALV 116
           AFLVDTLALV
Sbjct: 53  AFLVDTLALV 62



 Score = 43.5 bits (101), Expect(2) = 3e-12
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -2

Query: 74  VRRLEAQGVPSKQAEAITAAITEV 3
           VR LE+QGVPSKQAEAITAAITEV
Sbjct: 62  VRGLESQGVPSKQAEAITAAITEV 85


>ref|XP_002886229.1| hypothetical protein ARALYDRAFT_900313 [Arabidopsis lyrata subsp.
           lyrata] gi|297332069|gb|EFH62488.1| hypothetical protein
           ARALYDRAFT_900313 [Arabidopsis lyrata subsp. lyrata]
          Length = 230

 Score = 45.4 bits (106), Expect(2) = 3e-10
 Identities = 30/69 (43%), Positives = 39/69 (56%)
 Frame = -3

Query: 322 MAVCKRLVHLGIDSAICLSKFESSTAPKLYGTATTTRNSGVNRFDYRRISQVVNLNGSRA 143
           M + KRL  LG  SAI L+K      P+  G  ++       +F YR+ S++   NG RA
Sbjct: 1   MTLSKRLALLGAQSAITLAK------PR--GLVSSLGLLNRRQFPYRQYSELTKANGRRA 52

Query: 142 FLVDTLALV 116
           FLVDTLALV
Sbjct: 53  FLVDTLALV 61



 Score = 43.9 bits (102), Expect(2) = 3e-10
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -2

Query: 74  VRRLEAQGVPSKQAEAITAAITEV 3
           VR LEAQGVPSKQAEAIT+AITEV
Sbjct: 61  VRSLEAQGVPSKQAEAITSAITEV 84


>ref|NP_565388.1| uncharacterized protein [Arabidopsis thaliana]
           gi|17529264|gb|AAL38859.1| unknown protein [Arabidopsis
           thaliana] gi|20198032|gb|AAD22294.2| expressed protein
           [Arabidopsis thaliana] gi|21536621|gb|AAM60953.1|
           unknown [Arabidopsis thaliana]
           gi|29824341|gb|AAP04131.1| unknown protein [Arabidopsis
           thaliana] gi|330251406|gb|AEC06500.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 230

 Score = 45.1 bits (105), Expect(2) = 4e-10
 Identities = 30/69 (43%), Positives = 39/69 (56%)
 Frame = -3

Query: 322 MAVCKRLVHLGIDSAICLSKFESSTAPKLYGTATTTRNSGVNRFDYRRISQVVNLNGSRA 143
           M + KRL  LG  SAI L+K      P+  G++    +     F YR+ S++   NG RA
Sbjct: 1   MTLSKRLALLGAQSAITLAK------PRGLGSSLGLLDR--RPFPYRQFSELTKANGRRA 52

Query: 142 FLVDTLALV 116
           FLVDTLALV
Sbjct: 53  FLVDTLALV 61



 Score = 43.9 bits (102), Expect(2) = 4e-10
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -2

Query: 74  VRRLEAQGVPSKQAEAITAAITEV 3
           VR LEAQGVPSKQAEAIT+AITEV
Sbjct: 61  VRSLEAQGVPSKQAEAITSAITEV 84


>ref|NP_973473.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330251405|gb|AEC06499.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 173

 Score = 45.1 bits (105), Expect(2) = 4e-10
 Identities = 30/69 (43%), Positives = 39/69 (56%)
 Frame = -3

Query: 322 MAVCKRLVHLGIDSAICLSKFESSTAPKLYGTATTTRNSGVNRFDYRRISQVVNLNGSRA 143
           M + KRL  LG  SAI L+K      P+  G++    +     F YR+ S++   NG RA
Sbjct: 1   MTLSKRLALLGAQSAITLAK------PRGLGSSLGLLDR--RPFPYRQFSELTKANGRRA 52

Query: 142 FLVDTLALV 116
           FLVDTLALV
Sbjct: 53  FLVDTLALV 61



 Score = 43.9 bits (102), Expect(2) = 4e-10
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -2

Query: 74  VRRLEAQGVPSKQAEAITAAITEV 3
           VR LEAQGVPSKQAEAIT+AITEV
Sbjct: 61  VRSLEAQGVPSKQAEAITSAITEV 84


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