BLASTX nr result

ID: Bupleurum21_contig00012787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012787
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285659.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   282   3e-74
emb|CAN66717.1| hypothetical protein VITISV_039358 [Vitis vinifera]   282   3e-74
ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus c...   279   3e-73
ref|XP_002308357.1| predicted protein [Populus trichocarpa] gi|2...   278   5e-73
ref|XP_002876454.1| seven in absentia family protein [Arabidopsi...   275   5e-72

>ref|XP_002285659.1| PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Vitis vinifera]
           gi|297746416|emb|CBI16472.3| unnamed protein product
           [Vitis vinifera]
          Length = 308

 Score =  282 bits (722), Expect = 3e-74
 Identities = 136/187 (72%), Positives = 146/187 (78%)
 Frame = -2

Query: 645 RPYNCPYAGAECPVTGDIMFLVKHLKDDHNVDMHDGSTFNHRYVKANPHEVENATWMLTV 466
           RPY+CPYAGAEC VTGDI  LV HLKDDH VDMHDG TFNHRYVK+NP EVENATWMLTV
Sbjct: 144 RPYSCPYAGAECSVTGDIPLLVMHLKDDHKVDMHDGCTFNHRYVKSNPQEVENATWMLTV 203

Query: 465 FNCFNHQFCLHFEAFHIGMAPVYMAFLRFMGDDHDAKKFSYSLEVGGYGRKLTWQGVXXX 286
           FNCF  QFCLHFEAFH+GMAPVYMAFLRFMGD+++A+KFSYSLEVGGYGRKL WQGV   
Sbjct: 204 FNCFGRQFCLHFEAFHLGMAPVYMAFLRFMGDENEARKFSYSLEVGGYGRKLIWQGV--- 260

Query: 285 XXXXXXXXXXXXXXXXXXXXXXXXDSHKTVRDSLDGLFIQRSMALFFSGGDRQELKLKVA 106
                                   DSHK VRDS DGL IQR +ALFFSGG+RQ+LKLKVA
Sbjct: 261 -------------------PRSIRDSHKMVRDSQDGLVIQRKLALFFSGGERQQLKLKVA 301

Query: 105 GRIWKEQ 85
           GRIWKEQ
Sbjct: 302 GRIWKEQ 308


>emb|CAN66717.1| hypothetical protein VITISV_039358 [Vitis vinifera]
          Length = 308

 Score =  282 bits (722), Expect = 3e-74
 Identities = 136/187 (72%), Positives = 146/187 (78%)
 Frame = -2

Query: 645 RPYNCPYAGAECPVTGDIMFLVKHLKDDHNVDMHDGSTFNHRYVKANPHEVENATWMLTV 466
           RPY+CPYAGAEC VTGDI  LV HLKDDH VDMHDG TFNHRYVK+NP EVENATWMLTV
Sbjct: 144 RPYSCPYAGAECSVTGDIPLLVMHLKDDHKVDMHDGCTFNHRYVKSNPQEVENATWMLTV 203

Query: 465 FNCFNHQFCLHFEAFHIGMAPVYMAFLRFMGDDHDAKKFSYSLEVGGYGRKLTWQGVXXX 286
           FNCF  QFCLHFEAFH+GMAPVYMAFLRFMGD+++A+KFSYSLEVGGYGRKL WQGV   
Sbjct: 204 FNCFGRQFCLHFEAFHLGMAPVYMAFLRFMGDENEARKFSYSLEVGGYGRKLIWQGV--- 260

Query: 285 XXXXXXXXXXXXXXXXXXXXXXXXDSHKTVRDSLDGLFIQRSMALFFSGGDRQELKLKVA 106
                                   DSHK VRDS DGL IQR +ALFFSGG+RQ+LKLKVA
Sbjct: 261 -------------------PRSIRDSHKMVRDSQDGLXIQRKLALFFSGGERQQLKLKVA 301

Query: 105 GRIWKEQ 85
           GRIWKEQ
Sbjct: 302 GRIWKEQ 308


>ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus communis]
           gi|223525415|gb|EEF28013.1| Ubiquitin ligase SINAT2,
           putative [Ricinus communis]
          Length = 304

 Score =  279 bits (714), Expect = 3e-73
 Identities = 133/189 (70%), Positives = 146/189 (77%)
 Frame = -2

Query: 651 RHRPYNCPYAGAECPVTGDIMFLVKHLKDDHNVDMHDGSTFNHRYVKANPHEVENATWML 472
           R RPY+CPYAG+EC +TGDI  LV HLKDDH VDMHDG TFNHRYVK+NPHEVENATWML
Sbjct: 138 RFRPYSCPYAGSECSITGDIPTLVAHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWML 197

Query: 471 TVFNCFNHQFCLHFEAFHIGMAPVYMAFLRFMGDDHDAKKFSYSLEVGGYGRKLTWQGVX 292
           TVFNCF  QFCLHFEAF IGMAPVYMAFLRFMGDD++AKKFSYSLEVGG GRKL WQG+ 
Sbjct: 198 TVFNCFGRQFCLHFEAFQIGMAPVYMAFLRFMGDDNEAKKFSYSLEVGGNGRKLIWQGI- 256

Query: 291 XXXXXXXXXXXXXXXXXXXXXXXXXXDSHKTVRDSLDGLFIQRSMALFFSGGDRQELKLK 112
                                     DSH+ VRDS DGL IQRS+AL+FSGGDRQELKL+
Sbjct: 257 ---------------------PRSIRDSHRKVRDSQDGLIIQRSLALYFSGGDRQELKLR 295

Query: 111 VAGRIWKEQ 85
           + GRIWKE+
Sbjct: 296 ITGRIWKEE 304


>ref|XP_002308357.1| predicted protein [Populus trichocarpa] gi|222854333|gb|EEE91880.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  278 bits (712), Expect = 5e-73
 Identities = 132/189 (69%), Positives = 146/189 (77%)
 Frame = -2

Query: 651 RHRPYNCPYAGAECPVTGDIMFLVKHLKDDHNVDMHDGSTFNHRYVKANPHEVENATWML 472
           R RPY+CPYAG+EC VTGDI  LV HLKDDH VDMHDG TFNHRYVK+NPHEVENATWML
Sbjct: 141 RFRPYSCPYAGSECSVTGDIPALVSHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWML 200

Query: 471 TVFNCFNHQFCLHFEAFHIGMAPVYMAFLRFMGDDHDAKKFSYSLEVGGYGRKLTWQGVX 292
           TVFNCF  QFCLHFEAF +GMAPVYMAFLRFMGDD++AKKFSYSLEVGG GRKL WQG+ 
Sbjct: 201 TVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKKFSYSLEVGGNGRKLVWQGI- 259

Query: 291 XXXXXXXXXXXXXXXXXXXXXXXXXXDSHKTVRDSLDGLFIQRSMALFFSGGDRQELKLK 112
                                     DSH+ VRDS DGL IQR++AL+FSGGDRQELKL+
Sbjct: 260 ---------------------PRSIRDSHRKVRDSQDGLIIQRNLALYFSGGDRQELKLR 298

Query: 111 VAGRIWKEQ 85
           V GR+WKE+
Sbjct: 299 VTGRVWKEE 307


>ref|XP_002876454.1| seven in absentia family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322292|gb|EFH52713.1| seven in absentia family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score =  275 bits (703), Expect = 5e-72
 Identities = 131/189 (69%), Positives = 145/189 (76%)
 Frame = -2

Query: 651 RHRPYNCPYAGAECPVTGDIMFLVKHLKDDHNVDMHDGSTFNHRYVKANPHEVENATWML 472
           R RPY CPYAG+EC VTGDI  LV HLKDDH VDMHDG TFNHRYVK+NPHEVENATWML
Sbjct: 143 RFRPYTCPYAGSECAVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWML 202

Query: 471 TVFNCFNHQFCLHFEAFHIGMAPVYMAFLRFMGDDHDAKKFSYSLEVGGYGRKLTWQGVX 292
           TVFNCF  QFCLHFEAF +GMAPVYMAFLRFMGD+++AKKFSYSLEVG +GRKLTWQG+ 
Sbjct: 203 TVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGI- 261

Query: 291 XXXXXXXXXXXXXXXXXXXXXXXXXXDSHKTVRDSLDGLFIQRSMALFFSGGDRQELKLK 112
                                     DSH+ VRDS DGL I R++AL+FSGGDRQELKL+
Sbjct: 262 ---------------------PRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLR 300

Query: 111 VAGRIWKEQ 85
           V GRIWKE+
Sbjct: 301 VTGRIWKEE 309


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