BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012575
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote...   454   e-125
emb|CBI16387.3| unnamed protein product [Vitis vinifera]              446   e-123
ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote...   432   e-119
ref|XP_003597428.1| RNA-binding protein [Medicago truncatula] gi...   400   e-109
ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding prote...   399   e-109

>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 447

 Score =  454 bits (1168), Expect = e-125
 Identities = 225/302 (74%), Positives = 246/302 (81%), Gaps = 4/302 (1%)
 Frame = +3

Query: 3    IFVGDLAPDVTDILLQETFAAHYPSVRGAKVVTDPATGRSKGYGFVKFGDEMERNRSMNE 182
            IFVGDLAPDVTD LLQETF A YPSVRGAKVVTDP TGR+KGYGFVKF DEMERNR+M E
Sbjct: 136  IFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTE 195

Query: 183  MNGAYCSSRPMRISAATPKKTTGFQQQYASVKASVYPATVYPPAVQQTVPIENDINNTTI 362
            MNG YCS+RPMRISAATPKKTTGFQQQYA+   ++YPA  Y     Q +P +NDINNTTI
Sbjct: 196  MNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTI 255

Query: 363  FIGNLDPNVTEEELKQIFLQLGEIVYVRIPATRGCGFVQFVSRASAEEAIQRMQGTVIGQ 542
            F+GNLDPNVTEEELKQIF Q GE+VYV+IPA RGCGFVQF +R SAEEAIQRMQGTVIGQ
Sbjct: 256  FVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQ 315

Query: 543  QVVRISWGRSPTSKQDQPGAWGVQADPSQW-GAYYAYGQSYDPYAYGVTQDQXXXXXXXX 719
             VVRISWGRSPT+KQD PG+WG QADPSQW  AYY YGQ YD Y YG TQD         
Sbjct: 316  LVVRISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYGATQDPSLYAYGAY 375

Query: 720  XXXXXXPQQAEASQDI---AGAVPSVEQREEIYDPLATPDVDRLNAAYLAVHGRSILGHT 890
                  PQQAE  QD+   AGAVP+VEQR+E+YDPLATPDVD+LNAAYLAVHG +ILG +
Sbjct: 376  AGYLQYPQQAEGVQDLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRS 435

Query: 891  LW 896
            LW
Sbjct: 436  LW 437


>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  446 bits (1148), Expect = e-123
 Identities = 222/300 (74%), Positives = 243/300 (81%), Gaps = 2/300 (0%)
 Frame = +3

Query: 3    IFVGDLAPDVTDILLQETFAAHYPSVRGAKVVTDPATGRSKGYGFVKFGDEMERNRSMNE 182
            IFVGDLAPDVTD LLQETF A YPSVRGAKVVTDP TGR+KGYGFVKF DEMERNR+M E
Sbjct: 136  IFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTE 195

Query: 183  MNGAYCSSRPMRISAATPKKTTGFQQQYASVKASVYPATVYPPAVQQTVPIENDINNTTI 362
            MNG YCS+RPMRISAATPKKTTGFQQQYA+   ++YPA  Y     Q +P +NDINNTTI
Sbjct: 196  MNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTI 255

Query: 363  FIGNLDPNVTEEELKQIFLQLGEIVYVRIPATRGCGFVQFVSRASAEEAIQRMQGTVIGQ 542
            F+GNLDPNVTEEELKQIF Q GE+VYV+IPA RGCGFVQF +R SAEEAIQRMQGTVIGQ
Sbjct: 256  FVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQ 315

Query: 543  QVVRISWGRSPTSKQDQPGAWGVQADPSQW-GAYYAYGQSYDPYAYGVTQDQXXXXXXXX 719
             VVRISWGRSPT+KQD PG+WG QADPSQW  AYY YGQ YD Y YG TQD         
Sbjct: 316  LVVRISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYGATQDPSLYAYGAY 375

Query: 720  XXXXXXPQQAE-ASQDIAGAVPSVEQREEIYDPLATPDVDRLNAAYLAVHGRSILGHTLW 896
                  PQQA      +AGAVP+VEQR+E+YDPLATPDVD+LNAAYLAVHG +ILG +LW
Sbjct: 376  AGYLQYPQQARYYLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRSLW 435


>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 438

 Score =  432 bits (1110), Expect = e-119
 Identities = 219/302 (72%), Positives = 239/302 (79%), Gaps = 4/302 (1%)
 Frame = +3

Query: 3    IFVGDLAPDVTDILLQETFAAHYPSVRGAKVVTDPATGRSKGYGFVKFGDEMERNRSMNE 182
            IFVGDLAPDVTD LLQETF A YPSVRGAKVVTDP TGR+KGYGFVKF DEMERNR+M E
Sbjct: 136  IFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTE 195

Query: 183  MNGAYCSSRPMRISAATPKKTTGFQQQYASVKASVYPATVYPPAVQQTVPIENDINNTTI 362
            MNG YCS+RPMRISAATPKKTTGFQQQYA+   ++YPA  Y     Q +P +NDINNTTI
Sbjct: 196  MNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTI 255

Query: 363  FIGNLDPNVTEEELKQIFLQLGEIVYVRIPATRGCGFVQFVSRASAEEAIQRMQGTVIGQ 542
            F+GNLDPNVTEEELKQIF Q GE+VYV+IPA RGCGFVQF +R SAEEAIQRMQGTVIGQ
Sbjct: 256  FVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQ 315

Query: 543  QVVRISWGRSPTSKQDQPGAWGVQADPSQW-GAYYAYGQSYDPYAYGVTQDQXXXXXXXX 719
             VVRISWGRSPT+K         QADPSQW  AYY YGQ YD Y YG TQD         
Sbjct: 316  LVVRISWGRSPTAK---------QADPSQWSSAYYGYGQGYDAYPYGATQDPSLYAYGAY 366

Query: 720  XXXXXXPQQAEASQDI---AGAVPSVEQREEIYDPLATPDVDRLNAAYLAVHGRSILGHT 890
                  PQQAE  QD+   AGAVP+VEQR+E+YDPLATPDVD+LNAAYLAVHG +ILG +
Sbjct: 367  AGYLQYPQQAEGVQDLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRS 426

Query: 891  LW 896
            LW
Sbjct: 427  LW 428


>ref|XP_003597428.1| RNA-binding protein [Medicago truncatula] gi|355486476|gb|AES67679.1|
            RNA-binding protein [Medicago truncatula]
          Length = 428

 Score =  400 bits (1029), Expect = e-109
 Identities = 201/309 (65%), Positives = 235/309 (76%), Gaps = 9/309 (2%)
 Frame = +3

Query: 3    IFVGDLAPDVTDILLQETFAAHYPSVRGAKVVTDPATGRSKGYGFVKFGDEMERNRSMNE 182
            IFVGDLAPDVTD LLQETF  HY SVRGAKVVTDP TGRSKGYGFVKF DE ERNR+M+E
Sbjct: 110  IFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSE 169

Query: 183  MNGAYCSSRPMRISAATPKKTTGFQQQ-YASVKAS------VYPATVYPPAVQQTVPIEN 341
            MNG YCS+RPMRISAATPKKTTG+QQ  YA+V A+      +YP   Y  A   TVP E 
Sbjct: 170  MNGVYCSTRPMRISAATPKKTTGYQQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVPPEY 229

Query: 342  DINNTTIFIGNLDPNVTEEELKQIFLQLGEIVYVRIPATRGCGFVQFVSRASAEEAIQRM 521
            D+NNTTI++GNLD NV+EEELKQ FLQ GEIV V++   + CGFVQF +RASAEEAIQ+M
Sbjct: 230  DVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKM 289

Query: 522  QGTVIGQQVVRISWGRSPTSKQDQPGAWGVQADPSQWGAYYAYGQ-SYDPYAYGVTQDQX 698
            QG ++GQQV+R+SWGR  T++QD PG WG Q D SQW AYY YGQ  Y+ YAYG  QD  
Sbjct: 290  QGKILGQQVIRVSWGRPQTARQDVPGGWGQQVDQSQWSAYYGYGQPGYEAYAYGAAQDPS 349

Query: 699  XXXXXXXXXXXXXPQQAEASQDI-AGAVPSVEQREEIYDPLATPDVDRLNAAYLAVHGRS 875
                         PQQ E +QD+ A +VP++EQREE+YDPLA PDVD+LNAAYL+VHG +
Sbjct: 350  MYAYAGYASYAQYPQQVEGAQDVSAMSVPTLEQREELYDPLAMPDVDKLNAAYLSVHGNA 409

Query: 876  ILGHTLWQR 902
            ILG +LW +
Sbjct: 410  ILGRSLWHK 418


>ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Glycine max]
          Length = 419

 Score =  399 bits (1026), Expect = e-109
 Identities = 201/302 (66%), Positives = 230/302 (76%), Gaps = 2/302 (0%)
 Frame = +3

Query: 3    IFVGDLAPDVTDILLQETFAAHYPSVRGAKVVTDPATGRSKGYGFVKFGDEMERNRSMNE 182
            IFVGDLAPDVTD LLQETF AHYPSVRGAKVVTDP T RSKGYGFVKF DE ERNR+M E
Sbjct: 109  IFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTE 168

Query: 183  MNGAYCSSRPMRISAATPKKTTG-FQQQYASVKASVYPATVYPPAVQQTVPIENDINNTT 359
            MNG YCS+RPMRISAATPKKTTG +    A V   VYP   Y   V Q  P + D+NNTT
Sbjct: 169  MNGVYCSTRPMRISAATPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQVQPPDYDVNNTT 228

Query: 360  IFIGNLDPNVTEEELKQIFLQLGEIVYVRIPATRGCGFVQFVSRASAEEAIQRMQGTVIG 539
            IF+GNLD NV+EEELKQ  LQ GEIV V+I   +G GFVQF +RASAEEAIQ+MQG +IG
Sbjct: 229  IFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIG 288

Query: 540  QQVVRISWGRSPTSKQDQPGAWGVQADPSQWGAYYAYGQSYDPYAYGVTQDQXXXXXXXX 719
            QQVVRISWGR+ T++QD PG WG Q DP+QW AYY YGQ Y+ YAYG   D         
Sbjct: 289  QQVVRISWGRTLTARQDLPGGWGPQMDPNQWSAYYGYGQGYEAYAYGPAHDPSLYAYGAY 348

Query: 720  XXXXXXPQQAEASQDIAG-AVPSVEQREEIYDPLATPDVDRLNAAYLAVHGRSILGHTLW 896
                  PQQ E +QD++G +VP++EQREE+YDPLA PDVD+LNAAYL+VHG +ILG +LW
Sbjct: 349  PGYAQYPQQVEGAQDLSGMSVPTMEQREELYDPLAMPDVDKLNAAYLSVHGSAILGRSLW 408

Query: 897  QR 902
            Q+
Sbjct: 409  QK 410