BLASTX nr result

ID: Bupleurum21_contig00012178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00012178
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|2...   354   8e-96
ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...   351   7e-95
ref|XP_004146528.1| PREDICTED: general transcription factor IIE ...   340   1e-91
ref|XP_002509755.1| Transcription initiation factor IIE subunit ...   333   3e-89
ref|NP_001240869.1| uncharacterized protein LOC100788089 [Glycin...   331   7e-89

>ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|222846804|gb|EEE84351.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  354 bits (909), Expect = 8e-96
 Identities = 173/198 (87%), Positives = 186/198 (93%)
 Frame = +2

Query: 2   LLLETRQAFTAEQINEACYVDVNANKVVFDSLKNNIKVNYDGRRFSYKSKHDVKDKKQLL 181
           LLLETRQAFT EQIN+ CYVD+N+NK VFDSL+NN KV+YDG+RFSYKSKHD+KDK QLL
Sbjct: 86  LLLETRQAFTPEQINDHCYVDMNSNKAVFDSLRNNPKVHYDGKRFSYKSKHDLKDKSQLL 145

Query: 182 TLVRKFPEGIAVIDLKDAYPSVMDDLQALKAAGEIWLLSNFDSQEDIAYPNDPRVIIKVD 361
            L+RKFPEGIAVIDLKD+YPSVMDDLQALKA G+IWLLSNFDSQEDIAYPNDPR++IKVD
Sbjct: 146 VLIRKFPEGIAVIDLKDSYPSVMDDLQALKAVGQIWLLSNFDSQEDIAYPNDPRMVIKVD 205

Query: 362 DDLKQLFRGIELPRDMIDIEKDLQKNGMKPATNTAKRRAMAQVHGISNKPKQKKKKHEIS 541
           DDLKQLFRGIELPRDM+DIEKDLQKNGMKPATNTAKRRA AQV GIS K K KKKKHEIS
Sbjct: 206 DDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTAKRRAAAQVQGISTKQKAKKKKHEIS 265

Query: 542 KRTKLTNAHLPELFKNLG 595
           KRTKLTNAHLPELFKNLG
Sbjct: 266 KRTKLTNAHLPELFKNLG 283


>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
           vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
           product [Vitis vinifera]
          Length = 285

 Score =  351 bits (901), Expect = 7e-95
 Identities = 172/197 (87%), Positives = 186/197 (94%)
 Frame = +2

Query: 2   LLLETRQAFTAEQINEACYVDVNANKVVFDSLKNNIKVNYDGRRFSYKSKHDVKDKKQLL 181
           LLLETRQAFT EQINEACYVD NANK VFDSL+NN KV+YDG+RF+YKSKHD+KD+ QLL
Sbjct: 82  LLLETRQAFTPEQINEACYVDTNANKAVFDSLRNNPKVSYDGKRFAYKSKHDLKDRSQLL 141

Query: 182 TLVRKFPEGIAVIDLKDAYPSVMDDLQALKAAGEIWLLSNFDSQEDIAYPNDPRVIIKVD 361
            LVRKFPEGIAVIDLKD+YPSVM+DLQALKAAG++WLLSNFDSQEDIAYPNDPRV IKVD
Sbjct: 142 VLVRKFPEGIAVIDLKDSYPSVMEDLQALKAAGQVWLLSNFDSQEDIAYPNDPRVPIKVD 201

Query: 362 DDLKQLFRGIELPRDMIDIEKDLQKNGMKPATNTAKRRAMAQVHGISNKPKQKKKKHEIS 541
           DDLKQ FR IELPRDM+DIEKDLQKNGMKPATNTAKRRAMAQVHGI++K K KKKKHEIS
Sbjct: 202 DDLKQFFRTIELPRDMLDIEKDLQKNGMKPATNTAKRRAMAQVHGIASKSKPKKKKHEIS 261

Query: 542 KRTKLTNAHLPELFKNL 592
           KRTKLTNAHLPELF+NL
Sbjct: 262 KRTKLTNAHLPELFQNL 278


>ref|XP_004146528.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
           sativus] gi|449499921|ref|XP_004160955.1| PREDICTED:
           general transcription factor IIE subunit 2-like [Cucumis
           sativus]
          Length = 277

 Score =  340 bits (873), Expect = 1e-91
 Identities = 169/196 (86%), Positives = 183/196 (93%)
 Frame = +2

Query: 2   LLLETRQAFTAEQINEACYVDVNANKVVFDSLKNNIKVNYDGRRFSYKSKHDVKDKKQLL 181
           LLLETRQAFT EQINEACYVD+N+NK V+DSL+NN KV+YDGRRFSYKSKHD+KDK QLL
Sbjct: 83  LLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKVHYDGRRFSYKSKHDLKDKNQLL 142

Query: 182 TLVRKFPEGIAVIDLKDAYPSVMDDLQALKAAGEIWLLSNFDSQEDIAYPNDPRVIIKVD 361
            LVRKFPEGIAVIDLKDAYPSVM+DLQALKA+G++WLLSNFDSQEDIAYPNDPR+ IKVD
Sbjct: 143 YLVRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVD 202

Query: 362 DDLKQLFRGIELPRDMIDIEKDLQKNGMKPATNTAKRRAMAQVHGISNKPKQKKKKHEIS 541
           DDLKQLFR IELPRDM+D+EKDLQKNGMKPATNTAKRRA AQ H  S+KPK KKKK EIS
Sbjct: 203 DDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQ-HVASSKPKPKKKKQEIS 261

Query: 542 KRTKLTNAHLPELFKN 589
           KRTKLTNAHLPELFKN
Sbjct: 262 KRTKLTNAHLPELFKN 277


>ref|XP_002509755.1| Transcription initiation factor IIE subunit beta, putative [Ricinus
           communis] gi|223549654|gb|EEF51142.1| Transcription
           initiation factor IIE subunit beta, putative [Ricinus
           communis]
          Length = 282

 Score =  333 bits (853), Expect = 3e-89
 Identities = 165/197 (83%), Positives = 179/197 (90%)
 Frame = +2

Query: 2   LLLETRQAFTAEQINEACYVDVNANKVVFDSLKNNIKVNYDGRRFSYKSKHDVKDKKQLL 181
           LL ETRQAFT EQINEACYVDVN+NK VFDSL+NN KV+YDGR FSYKSKHD+KDKKQLL
Sbjct: 84  LLFETRQAFTPEQINEACYVDVNSNKAVFDSLRNNPKVHYDGRHFSYKSKHDLKDKKQLL 143

Query: 182 TLVRKFPEGIAVIDLKDAYPSVMDDLQALKAAGEIWLLSNFDSQEDIAYPNDPRVIIKVD 361
            L+R+F EGIAVIDLKDAYP+VM+DLQALKAAG IWLLSNFDSQEDIAYPNDP+ +IKVD
Sbjct: 144 YLIREFKEGIAVIDLKDAYPTVMEDLQALKAAGGIWLLSNFDSQEDIAYPNDPKAVIKVD 203

Query: 362 DDLKQLFRGIELPRDMIDIEKDLQKNGMKPATNTAKRRAMAQVHGISNKPKQKKKKHEIS 541
           D+LK  FR IELPRDM+DIEKDLQKNGMKPATNTAKRRA AQV GIS KPK KKK  EIS
Sbjct: 204 DELKVKFREIELPRDMLDIEKDLQKNGMKPATNTAKRRAAAQVQGISTKPKTKKKTKEIS 263

Query: 542 KRTKLTNAHLPELFKNL 592
           K+TKLTNAHLPELF+NL
Sbjct: 264 KKTKLTNAHLPELFQNL 280


>ref|NP_001240869.1| uncharacterized protein LOC100788089 [Glycine max]
           gi|255639642|gb|ACU20115.1| unknown [Glycine max]
          Length = 257

 Score =  331 bits (849), Expect = 7e-89
 Identities = 163/197 (82%), Positives = 181/197 (91%)
 Frame = +2

Query: 2   LLLETRQAFTAEQINEACYVDVNANKVVFDSLKNNIKVNYDGRRFSYKSKHDVKDKKQLL 181
           LL ETR+A T EQINEACYVD+ ANK VF+S++ N KV YDG RFSYKSKHDV+DK QLL
Sbjct: 60  LLFETRKALTIEQINEACYVDMRANKDVFESMRKNPKVKYDGERFSYKSKHDVRDKNQLL 119

Query: 182 TLVRKFPEGIAVIDLKDAYPSVMDDLQALKAAGEIWLLSNFDSQEDIAYPNDPRVIIKVD 361
            LVRKFPEGIAV+DLKD+YP+VM+DLQALKAA EIWLLSNFDSQEDIAYPNDP+V IKVD
Sbjct: 120 FLVRKFPEGIAVVDLKDSYPTVMEDLQALKAAREIWLLSNFDSQEDIAYPNDPKVPIKVD 179

Query: 362 DDLKQLFRGIELPRDMIDIEKDLQKNGMKPATNTAKRRAMAQVHGISNKPKQKKKKHEIS 541
           DDLKQLFRGIELPRDMIDIE+DLQKNGMKPATNTAKRR+ AQ+ GIS+KPK KKKK+EI+
Sbjct: 180 DDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISSKPKPKKKKNEIT 239

Query: 542 KRTKLTNAHLPELFKNL 592
           KRTKLTNAHLPELF+NL
Sbjct: 240 KRTKLTNAHLPELFQNL 256


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