BLASTX nr result

ID: Bupleurum21_contig00011975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011975
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reduc...   354   2e-95
ref|XP_002513357.1| 2,4-dienoyl-CoA reductase, putative [Ricinus...   350   2e-94
ref|XP_002884927.1| short-chain dehydrogenase/reductase family p...   338   9e-91
dbj|BAD44394.1| unknown protein [Arabidopsis thaliana]                338   2e-90
ref|NP_187886.2| peroxisomal 2,4-dienoyl-CoA reductase [Arabidop...   338   2e-90

>ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera]
           gi|297736138|emb|CBI24176.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  354 bits (909), Expect = 2e-95
 Identities = 189/269 (70%), Positives = 202/269 (75%)
 Frame = -3

Query: 984 SVAIMGXXXXXXXXXXXXXXSLGISAVGFAGDVRKQEDAKRVVESTVKHFGKLDILVNAA 805
           S+AIMG              S GI AVGF GDVRKQEDAKRVVESTVKHFG+LDILVNAA
Sbjct: 38  SIAIMGRRKQVLDSAVSGLCSQGIPAVGFVGDVRKQEDAKRVVESTVKHFGRLDILVNAA 97

Query: 804 AGNFLVSAEDLSPNGFRTVMDIDSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 625
           AGNFLVS+EDLSPNGFRTVMDIDSVG                                  
Sbjct: 98  AGNFLVSSEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSFSSGGSILNI---- 153

Query: 624 XXXXXSATLHYTASFYQIHVSAAKAAVDALTRNLALEWGTDYDIRVNGIAPGPIGDTTGM 445
                SATLHYTA++YQIHVSAAKAAVDA TRNLALEWGTDYDIRVNGIAPGPIGDT GM
Sbjct: 154 -----SATLHYTAAWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPIGDTAGM 208

Query: 444 SKLGPDEIESNSRNEMPLYKLGEKWDIAVAALYLSSEAGKYVNGTTLVVDGGLWLSKPRH 265
           SKL P+EI + +R  MPLYKLGEKWDIA+AALYL+S+AGKY+NGTTLVVDGGLWLS+PRH
Sbjct: 209 SKLAPEEISNKAREIMPLYKLGEKWDIAMAALYLASDAGKYINGTTLVVDGGLWLSRPRH 268

Query: 264 LPKEAVKQLSRTVEKRSRTAPVGVPSSKL 178
           LPKEAVKQLSR VEKRSR  PVGVP SKL
Sbjct: 269 LPKEAVKQLSRAVEKRSRGVPVGVPKSKL 297


>ref|XP_002513357.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis]
           gi|223547265|gb|EEF48760.1| 2,4-dienoyl-CoA reductase,
           putative [Ricinus communis]
          Length = 297

 Score =  350 bits (899), Expect = 2e-94
 Identities = 186/269 (69%), Positives = 204/269 (75%)
 Frame = -3

Query: 984 SVAIMGXXXXXXXXXXXXXXSLGISAVGFAGDVRKQEDAKRVVESTVKHFGKLDILVNAA 805
           SVAIMG              SL I +VGF GDVRKQEDAKRV+EST KHFG++DILVNAA
Sbjct: 38  SVAIMGRRKQVLDSAVSHLNSLQIPSVGFVGDVRKQEDAKRVLESTFKHFGRIDILVNAA 97

Query: 804 AGNFLVSAEDLSPNGFRTVMDIDSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 625
           AGNFLVS EDLSPNGFRTVMDID+VG                                  
Sbjct: 98  AGNFLVSPEDLSPNGFRTVMDIDAVGTFTMCHESLKYLKIGGLGRSSSGGGTILNI---- 153

Query: 624 XXXXXSATLHYTASFYQIHVSAAKAAVDALTRNLALEWGTDYDIRVNGIAPGPIGDTTGM 445
                SATLHYTA++YQIHVSAAKAAVDA+ RNLALEWGTDYDIRVNGIAPGPIGDT GM
Sbjct: 154 -----SATLHYTAAWYQIHVSAAKAAVDAIARNLALEWGTDYDIRVNGIAPGPIGDTPGM 208

Query: 444 SKLGPDEIESNSRNEMPLYKLGEKWDIAVAALYLSSEAGKYVNGTTLVVDGGLWLSKPRH 265
           SKL PD+I S +R+ MPLYKLGEKWDIA+AALYL+S+AGK+VNGTT+VVDGGLWLS+PRH
Sbjct: 209 SKLAPDDINSKARDYMPLYKLGEKWDIAMAALYLASDAGKFVNGTTIVVDGGLWLSRPRH 268

Query: 264 LPKEAVKQLSRTVEKRSRTAPVGVPSSKL 178
           LPK+AVKQLSRTVEKRSR APVGVPSSKL
Sbjct: 269 LPKDAVKQLSRTVEKRSRDAPVGVPSSKL 297


>ref|XP_002884927.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297330767|gb|EFH61186.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 298

 Score =  338 bits (868), Expect = 9e-91
 Identities = 179/269 (66%), Positives = 199/269 (73%)
 Frame = -3

Query: 984 SVAIMGXXXXXXXXXXXXXXSLGISAVGFAGDVRKQEDAKRVVESTVKHFGKLDILVNAA 805
           S+AIMG              SLGI A+G  GDVRKQEDA+RVVE+T +HFG++DILVNAA
Sbjct: 38  SIAIMGRRKQVLDDAVSALRSLGIQAIGLEGDVRKQEDARRVVEATYQHFGRIDILVNAA 97

Query: 804 AGNFLVSAEDLSPNGFRTVMDIDSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 625
           AGNFL +AEDLSPNGFRTV+DID+VG                                  
Sbjct: 98  AGNFLAAAEDLSPNGFRTVLDIDAVGTFNMCHAALKYLKKGGPGRDSSTGGGSIINI--- 154

Query: 624 XXXXXSATLHYTASFYQIHVSAAKAAVDALTRNLALEWGTDYDIRVNGIAPGPIGDTTGM 445
                SATLHYTAS+YQIHVSAAKAAVDA TRNLALEWGTDYDIRVNGIAPGPIG T GM
Sbjct: 155 -----SATLHYTASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPIGGTPGM 209

Query: 444 SKLGPDEIESNSRNEMPLYKLGEKWDIAVAALYLSSEAGKYVNGTTLVVDGGLWLSKPRH 265
           SKL P+EIE+ +R  MPLYKLGEKWDIA+AALYLS ++GKYVNG T+VVDGGLWLSKPRH
Sbjct: 210 SKLVPEEIENKTREYMPLYKLGEKWDIAMAALYLSCDSGKYVNGLTVVVDGGLWLSKPRH 269

Query: 264 LPKEAVKQLSRTVEKRSRTAPVGVPSSKL 178
           LPKEAVKQLSR VEKRSR  PVG+P+SKL
Sbjct: 270 LPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298


>dbj|BAD44394.1| unknown protein [Arabidopsis thaliana]
          Length = 298

 Score =  338 bits (866), Expect = 2e-90
 Identities = 179/269 (66%), Positives = 199/269 (73%)
 Frame = -3

Query: 984 SVAIMGXXXXXXXXXXXXXXSLGISAVGFAGDVRKQEDAKRVVESTVKHFGKLDILVNAA 805
           S+AIMG              SLGI A+G  GDVRKQEDA+RVVE+T +HFGKLDILVNAA
Sbjct: 38  SIAIMGRRKQVLDDAVSALRSLGIQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAA 97

Query: 804 AGNFLVSAEDLSPNGFRTVMDIDSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 625
           AGNFL +AEDLSPNGFRTV+DID+VG                                  
Sbjct: 98  AGNFLAAAEDLSPNGFRTVLDIDAVGTFNLCHAALKYLKKGAPGRDSSSGGGSIINI--- 154

Query: 624 XXXXXSATLHYTASFYQIHVSAAKAAVDALTRNLALEWGTDYDIRVNGIAPGPIGDTTGM 445
                SATLHYTAS+YQIHVSAAKAAVDA TRNLALEWGTDYDIRVNGIAPGPIG T GM
Sbjct: 155 -----SATLHYTASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPIGGTPGM 209

Query: 444 SKLGPDEIESNSRNEMPLYKLGEKWDIAVAALYLSSEAGKYVNGTTLVVDGGLWLSKPRH 265
           SKL P+EIE+ +R  MPLYK+GEKWDIA+AALYLS ++GKYV+G T+VVDGGLWLSKPRH
Sbjct: 210 SKLVPEEIENKTREYMPLYKVGEKWDIAMAALYLSCDSGKYVSGLTMVVDGGLWLSKPRH 269

Query: 264 LPKEAVKQLSRTVEKRSRTAPVGVPSSKL 178
           LPKEAVKQLSR VEKRSR  PVG+P+SKL
Sbjct: 270 LPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298


>ref|NP_187886.2| peroxisomal 2,4-dienoyl-CoA reductase [Arabidopsis thaliana]
           gi|66774119|sp|Q9LTV6.1|DECR2_ARATH RecName:
           Full=Peroxisomal 2,4-dienoyl-CoA reductase
           gi|11994422|dbj|BAB02424.1| oxidoreductase, short-chain
           dehydrogenase/reductase family-like protein [Arabidopsis
           thaliana] gi|18252923|gb|AAL62388.1| unknown protein
           [Arabidopsis thaliana] gi|21389641|gb|AAM48019.1|
           unknown protein [Arabidopsis thaliana]
           gi|51968660|dbj|BAD43022.1| unknown protein [Arabidopsis
           thaliana] gi|51970504|dbj|BAD43944.1| unknown protein
           [Arabidopsis thaliana] gi|51970752|dbj|BAD44068.1|
           unknown protein [Arabidopsis thaliana]
           gi|51971158|dbj|BAD44271.1| unknown protein [Arabidopsis
           thaliana] gi|51971749|dbj|BAD44539.1| unknown protein
           [Arabidopsis thaliana] gi|51971981|dbj|BAD44655.1|
           unknown protein [Arabidopsis thaliana]
           gi|51972015|dbj|BAD44672.1| unknown protein [Arabidopsis
           thaliana] gi|62320001|dbj|BAD94126.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|110739412|dbj|BAF01616.1| hypothetical protein
           [Arabidopsis thaliana] gi|332641726|gb|AEE75247.1|
           peroxisomal 2,4-dienoyl-CoA reductase [Arabidopsis
           thaliana]
          Length = 298

 Score =  338 bits (866), Expect = 2e-90
 Identities = 179/269 (66%), Positives = 199/269 (73%)
 Frame = -3

Query: 984 SVAIMGXXXXXXXXXXXXXXSLGISAVGFAGDVRKQEDAKRVVESTVKHFGKLDILVNAA 805
           S+AIMG              SLGI A+G  GDVRKQEDA+RVVE+T +HFGKLDILVNAA
Sbjct: 38  SIAIMGRRKQVLDDAVSALRSLGIQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAA 97

Query: 804 AGNFLVSAEDLSPNGFRTVMDIDSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 625
           AGNFL +AEDLSPNGFRTV+DID+VG                                  
Sbjct: 98  AGNFLAAAEDLSPNGFRTVLDIDAVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINI--- 154

Query: 624 XXXXXSATLHYTASFYQIHVSAAKAAVDALTRNLALEWGTDYDIRVNGIAPGPIGDTTGM 445
                SATLHYTAS+YQIHVSAAKAAVDA TRNLALEWGTDYDIRVNGIAPGPIG T GM
Sbjct: 155 -----SATLHYTASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPIGGTPGM 209

Query: 444 SKLGPDEIESNSRNEMPLYKLGEKWDIAVAALYLSSEAGKYVNGTTLVVDGGLWLSKPRH 265
           SKL P+EIE+ +R  MPLYK+GEKWDIA+AALYLS ++GKYV+G T+VVDGGLWLSKPRH
Sbjct: 210 SKLVPEEIENKTREYMPLYKVGEKWDIAMAALYLSCDSGKYVSGLTMVVDGGLWLSKPRH 269

Query: 264 LPKEAVKQLSRTVEKRSRTAPVGVPSSKL 178
           LPKEAVKQLSR VEKRSR  PVG+P+SKL
Sbjct: 270 LPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298


Top