BLASTX nr result

ID: Bupleurum21_contig00011257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011257
         (1299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273550.1| PREDICTED: short-chain dehydrogenase TIC 32,...   458   e-126
ref|XP_002309049.1| predicted protein [Populus trichocarpa] gi|2...   434   e-119
ref|XP_002531343.1| short-chain dehydrogenase, putative [Ricinus...   429   e-118
ref|XP_002457359.1| hypothetical protein SORBIDRAFT_03g005980 [S...   425   e-116
ref|NP_001241121.1| uncharacterized protein LOC100795299 [Glycin...   425   e-116

>ref|XP_002273550.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
            vinifera] gi|297741471|emb|CBI32603.3| unnamed protein
            product [Vitis vinifera]
          Length = 324

 Score =  458 bits (1179), Expect = e-126
 Identities = 231/318 (72%), Positives = 266/318 (83%)
 Frame = -2

Query: 1241 MGLLSLXXXXXXXXXXXXXXXAEQVTDGIDATNLTAIVTGGASGIGFETARVLALRKAHV 1062
            MG+ SL               AEQVT+G+DA+NLTAIVTGGASGIGFETARVLALRKAHV
Sbjct: 1    MGIFSLITGRPGPSGFGSASTAEQVTEGVDASNLTAIVTGGASGIGFETARVLALRKAHV 60

Query: 1061 IIAARNVEAANEAKQQILKDQEMARVDVLKLDLSSIKSVRDFADSFKAXXXXXXXXXXNA 882
            +IAARN++AANEAKQ ILKD E A VDVLKLDL S+KS+R F D+F A          NA
Sbjct: 61   VIAARNMDAANEAKQLILKDNEAAHVDVLKLDLCSMKSIRAFVDNFNALNLPLNLLINNA 120

Query: 881  GIMFCPYKLSENGIEIQFATNYLGHFLLTNLLLDKMKETAKSSGVEGRIVNLSSIAHLHT 702
            GIMFCP++LS++GIE QFATN++GHFLLTNLLLDKMK TA+++G+EGRIVNLSSIAHLHT
Sbjct: 121  GIMFCPFQLSQDGIESQFATNHIGHFLLTNLLLDKMKSTARTTGIEGRIVNLSSIAHLHT 180

Query: 701  YPEGILFDKLNDEKSYSDKKAYGQSKLANILHANELSRRLQAEGANITVNSVHPGLIMTN 522
            Y  GI FD +NDEKSYSDK+AYGQSKLANILHA ELSRRLQ EGANI+VN+VHPGLIMTN
Sbjct: 181  YENGIKFDGINDEKSYSDKRAYGQSKLANILHAKELSRRLQEEGANISVNAVHPGLIMTN 240

Query: 521  LFKYSNVLFKVLKLVTPLIWKNVPQGAATTCYVALHPKMKGVSGKYFLDCNEWPPSKLAT 342
            LF++S VL K+L+L++ ++WKNVPQGAATTCYVALHP MKGVSGKY+LDCNE  PS  A+
Sbjct: 241  LFRHSAVLMKILQLLSYILWKNVPQGAATTCYVALHPSMKGVSGKYYLDCNEMAPSAYAS 300

Query: 341  DEKLAKRLWDFSNKLANS 288
            DE LAK+LWDFSNKL NS
Sbjct: 301  DETLAKKLWDFSNKLVNS 318


>ref|XP_002309049.1| predicted protein [Populus trichocarpa] gi|222855025|gb|EEE92572.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  434 bits (1115), Expect = e-119
 Identities = 214/296 (72%), Positives = 249/296 (84%)
 Frame = -2

Query: 1175 EQVTDGIDATNLTAIVTGGASGIGFETARVLALRKAHVIIAARNVEAANEAKQQILKDQE 996
            EQVT GIDA+NLT ++TGGASGIG ET RVLAL KAHVIIAARN+ AANEAKQ ILK+ E
Sbjct: 23   EQVTQGIDASNLTVLITGGASGIGLETTRVLALHKAHVIIAARNMVAANEAKQLILKEDE 82

Query: 995  MARVDVLKLDLSSIKSVRDFADSFKAXXXXXXXXXXNAGIMFCPYKLSENGIEIQFATNY 816
             ARVDVLKLDLSSIKS+R+FAD+  +          NAGIMFCPY+LSE+GIE+QFATN+
Sbjct: 83   DARVDVLKLDLSSIKSIREFADNLNSLDLPLNILINNAGIMFCPYQLSEDGIEMQFATNH 142

Query: 815  LGHFLLTNLLLDKMKETAKSSGVEGRIVNLSSIAHLHTYPEGILFDKLNDEKSYSDKKAY 636
            LGHFLLTNLLLDKMKETA+++GVEGRIVNLSS+AH+HTY +GI F+ +ND+K YSDK+AY
Sbjct: 143  LGHFLLTNLLLDKMKETARTTGVEGRIVNLSSVAHIHTYKDGIRFNNINDKKRYSDKRAY 202

Query: 635  GQSKLANILHANELSRRLQAEGANITVNSVHPGLIMTNLFKYSNVLFKVLKLVTPLIWKN 456
            GQSKLANILHA ELSRR Q EG NIT N+VHPGLIMTNLFK+S +L + LK  +  +WKN
Sbjct: 203  GQSKLANILHAKELSRRFQEEGVNITANAVHPGLIMTNLFKHSAILMRTLKFFSFFLWKN 262

Query: 455  VPQGAATTCYVALHPKMKGVSGKYFLDCNEWPPSKLATDEKLAKRLWDFSNKLANS 288
            VPQGAATTCYVALHP +KGV+GKY++DCN   PS  A DE LA++LWDFSNKL  S
Sbjct: 263  VPQGAATTCYVALHPSLKGVTGKYYVDCNSLGPSAFARDEALARKLWDFSNKLITS 318


>ref|XP_002531343.1| short-chain dehydrogenase, putative [Ricinus communis]
            gi|223529065|gb|EEF31050.1| short-chain dehydrogenase,
            putative [Ricinus communis]
          Length = 322

 Score =  429 bits (1104), Expect = e-118
 Identities = 212/297 (71%), Positives = 253/297 (85%)
 Frame = -2

Query: 1175 EQVTDGIDATNLTAIVTGGASGIGFETARVLALRKAHVIIAARNVEAANEAKQQILKDQE 996
            EQVT+GIDA+N T I+TGGASGIG ETARVLALRKAHVIIA+RN++AANEAK+ ILKD E
Sbjct: 23   EQVTEGIDASNCTTIITGGASGIGLETARVLALRKAHVIIASRNLDAANEAKKLILKDHE 82

Query: 995  MARVDVLKLDLSSIKSVRDFADSFKAXXXXXXXXXXNAGIMFCPYKLSENGIEIQFATNY 816
             ARVDVLKLDL+SIKSVR+FAD+F A          NAGIMFCPY+LSE+GIEIQFATN+
Sbjct: 83   NARVDVLKLDLASIKSVREFADNFIALDLPLNLLINNAGIMFCPYQLSEDGIEIQFATNH 142

Query: 815  LGHFLLTNLLLDKMKETAKSSGVEGRIVNLSSIAHLHTYPEGILFDKLNDEKSYSDKKAY 636
            +GHFLLTNLLL+KMKETA+++G+EGRIVNLSSIAH+HTY  GILFD LN+++SYSDK+AY
Sbjct: 143  IGHFLLTNLLLEKMKETARTTGIEGRIVNLSSIAHIHTYKGGILFDDLNNKRSYSDKRAY 202

Query: 635  GQSKLANILHANELSRRLQAEGANITVNSVHPGLIMTNLFKYSNVLFKVLKLVTPLIWKN 456
            GQSKLANILHA EL+RR Q EG NIT N+VHPGLIMT L ++S ++ ++L + +  +WKN
Sbjct: 203  GQSKLANILHAKELNRRFQEEGVNITANAVHPGLIMTPLMRHSALIMRILHIFSLPLWKN 262

Query: 455  VPQGAATTCYVALHPKMKGVSGKYFLDCNEWPPSKLATDEKLAKRLWDFSNKLANSA 285
            VPQGAATTCY ALHP +KG SGKYF+DCNE  PS  A D+ LA++LWD+SNKL  SA
Sbjct: 263  VPQGAATTCYAALHPSLKGASGKYFVDCNEIKPSAFARDDLLARKLWDYSNKLITSA 319


>ref|XP_002457359.1| hypothetical protein SORBIDRAFT_03g005980 [Sorghum bicolor]
            gi|241929334|gb|EES02479.1| hypothetical protein
            SORBIDRAFT_03g005980 [Sorghum bicolor]
          Length = 320

 Score =  425 bits (1093), Expect = e-116
 Identities = 214/319 (67%), Positives = 257/319 (80%)
 Frame = -2

Query: 1241 MGLLSLXXXXXXXXXXXXXXXAEQVTDGIDATNLTAIVTGGASGIGFETARVLALRKAHV 1062
            MG+LSL               AEQVTDG+DA+ LT ++TGGASGIG ET+RV ALR AHV
Sbjct: 1    MGILSLITGKAGASGFGSASTAEQVTDGVDASRLTVVITGGASGIGLETSRVFALRGAHV 60

Query: 1061 IIAARNVEAANEAKQQILKDQEMARVDVLKLDLSSIKSVRDFADSFKAXXXXXXXXXXNA 882
            +IAARN EAA+EA++ I++    AR+DVLKLDLSS+KSVR FAD F +          NA
Sbjct: 61   VIAARNTEAASEARKTIMEKNPTARIDVLKLDLSSLKSVRAFADQFNSMKLPLNILINNA 120

Query: 881  GIMFCPYKLSENGIEIQFATNYLGHFLLTNLLLDKMKETAKSSGVEGRIVNLSSIAHLHT 702
            G+MFCP++LS++G+E+QFATN+LGHFLLTNLLLD MK TAKS+G+EGRIVNLSS+AH HT
Sbjct: 121  GVMFCPFQLSKDGVEMQFATNHLGHFLLTNLLLDTMKATAKSTGIEGRIVNLSSVAHHHT 180

Query: 701  YPEGILFDKLNDEKSYSDKKAYGQSKLANILHANELSRRLQAEGANITVNSVHPGLIMTN 522
            YP+GI FDKLNDEK Y+DK AYGQSKLAN+LHANELSRRL+AEGANITVNSVHPGLIMTN
Sbjct: 181  YPKGIDFDKLNDEKIYNDKMAYGQSKLANLLHANELSRRLKAEGANITVNSVHPGLIMTN 240

Query: 521  LFKYSNVLFKVLKLVTPLIWKNVPQGAATTCYVALHPKMKGVSGKYFLDCNEWPPSKLAT 342
            L ++S VL KVL++ T ++WKNVPQGAATTCY  L+P++KGV+GKYF DCN    SKLA 
Sbjct: 241  LMRHSFVLMKVLQVATYILWKNVPQGAATTCYAGLNPQLKGVTGKYFADCNVEKTSKLAR 300

Query: 341  DEKLAKRLWDFSNKLANSA 285
             E+LAK+LWDFS +L  SA
Sbjct: 301  SEELAKQLWDFSEELIKSA 319


>ref|NP_001241121.1| uncharacterized protein LOC100795299 [Glycine max]
            gi|255636812|gb|ACU18739.1| unknown [Glycine max]
          Length = 323

 Score =  425 bits (1092), Expect = e-116
 Identities = 210/296 (70%), Positives = 248/296 (83%)
 Frame = -2

Query: 1175 EQVTDGIDATNLTAIVTGGASGIGFETARVLALRKAHVIIAARNVEAANEAKQQILKDQE 996
            EQVT+GIDA+NLTAI+TGGASGIG ETARVLA+RK HVIIAARN+E+A EAKQ IL++ E
Sbjct: 24   EQVTEGIDASNLTAIITGGASGIGLETARVLAIRKVHVIIAARNMESAKEAKQLILQEDE 83

Query: 995  MARVDVLKLDLSSIKSVRDFADSFKAXXXXXXXXXXNAGIMFCPYKLSENGIEIQFATNY 816
             A VD++KLDL S+KSVR F D+F A          NAG+MFCPY+ +E+GIE+QFATNY
Sbjct: 84   SACVDIMKLDLCSLKSVRTFVDNFIALGLPLNILINNAGVMFCPYQQTEDGIEMQFATNY 143

Query: 815  LGHFLLTNLLLDKMKETAKSSGVEGRIVNLSSIAHLHTYPEGILFDKLNDEKSYSDKKAY 636
            LGHFLLTNLLLDKMK+TAK +G+EGRIVNLSSIAHL+TY EGI FD +NDE  Y +KKAY
Sbjct: 144  LGHFLLTNLLLDKMKQTAKDTGIEGRIVNLSSIAHLYTYEEGIRFDTINDEDGYHEKKAY 203

Query: 635  GQSKLANILHANELSRRLQAEGANITVNSVHPGLIMTNLFKYSNVLFKVLKLVTPLIWKN 456
            GQSKLANILH NELSRRLQAEG NIT NSVHPG+IMT L ++S++L   LK+ + +IWKN
Sbjct: 204  GQSKLANILHTNELSRRLQAEGVNITANSVHPGVIMTPLMRHSSLLMNFLKMFSFMIWKN 263

Query: 455  VPQGAATTCYVALHPKMKGVSGKYFLDCNEWPPSKLATDEKLAKRLWDFSNKLANS 288
            VPQGAATTCYVALHP +KGV+GKY  DCNE PPS  A++E L ++LWDFSNK+ NS
Sbjct: 264  VPQGAATTCYVALHPSLKGVTGKYLQDCNESPPSAHASNELLGRKLWDFSNKMINS 319


Top