BLASTX nr result

ID: Bupleurum21_contig00011239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011239
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...    65   8e-09
emb|CBI19279.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002285663.1| PREDICTED: double-stranded RNA-binding prote...    64   1e-08
ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding prote...    63   2e-08
ref|XP_003523789.1| PREDICTED: double-stranded RNA-binding prote...    63   2e-08

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 26/52 (50%), Positives = 40/52 (76%)
 Frame = -1

Query: 157 SNHVPQEVLAKSLLNEYAQKAALPLPLYETLNEGSPHAPRFRSTVIVNNVKY 2
           S  +P+ ++ K+ L EY Q++A+PLP+Y+T+NEG  HAP+FRSTV+V+   Y
Sbjct: 14  STRLPEHLMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGATY 65


>emb|CBI19279.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = -1

Query: 127 KSLLNEYAQKAALPLPLYETLNEGSPHAPRFRSTVIVNNVKY 2
           KS L EYAQK  LP PLY+T+ EG PH P F+STVIVN+V+Y
Sbjct: 17  KSRLQEYAQKVGLPTPLYDTIKEGPPHVPSFKSTVIVNDVRY 58


>ref|XP_002285663.1| PREDICTED: double-stranded RNA-binding protein 1 [Vitis vinifera]
           gi|147781065|emb|CAN68128.1| hypothetical protein
           VITISV_043706 [Vitis vinifera]
          Length = 400

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = -1

Query: 127 KSLLNEYAQKAALPLPLYETLNEGSPHAPRFRSTVIVNNVKY 2
           KS L EYAQK  LP PLY+T+ EG PH P F+STVIVN+V+Y
Sbjct: 17  KSRLQEYAQKVGLPTPLYDTIKEGPPHVPSFKSTVIVNDVRY 58


>ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding protein 1-like [Glycine max]
          Length = 359

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = -1

Query: 127 KSLLNEYAQKAALPLPLYETLNEGSPHAPRFRSTVIVNNVKY 2
           KS L EYAQKA LP P+YET+ EG  H P FRSTVIVN+V+Y
Sbjct: 17  KSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRY 58


>ref|XP_003523789.1| PREDICTED: double-stranded RNA-binding protein 1-like [Glycine max]
          Length = 359

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = -1

Query: 127 KSLLNEYAQKAALPLPLYETLNEGSPHAPRFRSTVIVNNVKY 2
           KS L EYAQKA LP P+YET+ EG  H P FRSTVIVN+V+Y
Sbjct: 17  KSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRY 58


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