BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00011031
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-l...   405   e-110
gb|ABC01886.1| 3'-5'-exoribonuclease/RNA binding protein-like pr...   400   e-109
emb|CBI29839.3| unnamed protein product [Vitis vinifera]              396   e-108
ref|XP_002532079.1| exosome complex exonuclease rrp43, putative ...   394   e-107
ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-l...   392   e-106

>ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
          Length = 303

 Score =  405 bits (1041), Expect = e-110
 Identities = 223/321 (69%), Positives = 244/321 (76%), Gaps = 1/321 (0%)
 Frame = +3

Query: 132  MSAVNGFGDLSSEMEVDAFRRLFPLRFHERHLLESIRPDARPLGKARDTTLALXXXXXXX 311
            M + N  GDLSSEMEVDAFRRLFPLR+HER LL+SIRPDARPLG+ARDT+LAL       
Sbjct: 1    MVSANVSGDLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASAD 60

Query: 312  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESPDEGCLAIEFHMPPI 491
                                                       ESPDEG +AIEF+MPPI
Sbjct: 61   GSALAKIGCTTMLAAVKMEVMTPPK------------------ESPDEGSIAIEFYMPPI 102

Query: 492  CSPIVRPGRPAELAPVVSKQLSDTILSSGMINLKDLCLVSGKAAWMAYLDIYCLDADGAL 671
            CSP+VRPGRPAE APVVSKQLSDTILSSGMINLK+L LVSGKAAWMAYLDIYCLDADG+L
Sbjct: 103  CSPLVRPGRPAEEAPVVSKQLSDTILSSGMINLKELSLVSGKAAWMAYLDIYCLDADGSL 162

Query: 672  FDTALLSAVAAFSHLNIPVVSLNDDGR-VVVSEEIEGEKLGNEPVNKDKRKLNLRSIPFS 848
            FD ALL+AVAAFSHL IPVVSLN++GR VVVSEE E  K   EPVNK KRKL L S+PFS
Sbjct: 163  FDAALLAAVAAFSHLRIPVVSLNEEGRVVVVSEENEEGKSEKEPVNKGKRKLTLSSLPFS 222

Query: 849  LTCILHKQYLLADPTAEEESIMDTLLTVVLDSSCQLVSLYKPGGSFLADNSAVQDCISLT 1028
            LTCILHK Y+LADPTAEEESIM+TL+TVVLDSS QLVSLYKPGG  LA  SAVQDCI+LT
Sbjct: 223  LTCILHKNYILADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGPVLAYASAVQDCIALT 282

Query: 1029 RQRVKELQTILTEAITDMEVD 1091
            RQRVKEL++IL EAI+DMEVD
Sbjct: 283  RQRVKELKSILNEAISDMEVD 303


>gb|ABC01886.1| 3'-5'-exoribonuclease/RNA binding protein-like protein [Solanum
            tuberosum]
          Length = 314

 Score =  400 bits (1029), Expect = e-109
 Identities = 216/327 (66%), Positives = 240/327 (73%), Gaps = 1/327 (0%)
 Frame = +3

Query: 132  MSAVNGFGDLSSEMEVDAFRRLFPLRFHERHLLESIRPDARPLGKARDTTLALXXXXXXX 311
            M+A NG  DLSSEMEVDAFRRLFPLR+HE HLL+S+RPDAR LG ARDTTLAL       
Sbjct: 1    MAAANGSSDLSSEMEVDAFRRLFPLRYHEHHLLKSVRPDARKLGSARDTTLALGAVASAD 60

Query: 312  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESPDEGCLAIEFHMPPI 491
                                                       E PDEG +AIEFHMPPI
Sbjct: 61   GSALAKIGSTTMLAAIKMEVMTPTV------------------ECPDEGSIAIEFHMPPI 102

Query: 492  CSPIVRPGRPAELAPVVSKQLSDTILSSGMINLKDLCLVSGKAAWMAYLDIYCLDADGAL 671
            CSP+VRPGRPAE A V+SKQLSDTILSSGMI+LK+LCLV GKAAWMAYLDIYCLDADGAL
Sbjct: 103  CSPLVRPGRPAEAASVISKQLSDTILSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGAL 162

Query: 672  FDTALLSAVAAFSHLNIPVVSLNDDGRVV-VSEEIEGEKLGNEPVNKDKRKLNLRSIPFS 848
            FDTALLSAVAAFSHLNIPVVSLNDDGR+V VSE+    KL  EPVN +KRKL L S+PFS
Sbjct: 163  FDTALLSAVAAFSHLNIPVVSLNDDGRIVLVSEDTVRLKLEKEPVNTEKRKLKLNSLPFS 222

Query: 849  LTCILHKQYLLADPTAEEESIMDTLLTVVLDSSCQLVSLYKPGGSFLADNSAVQDCISLT 1028
            LTCILHK Y+LADPTAEEE IM+T++TVVLDSS QLVSL KPGG  L+  S +QDCI L 
Sbjct: 223  LTCILHKNYILADPTAEEEPIMETIVTVVLDSSHQLVSLNKPGGPVLSHTSVIQDCIGLA 282

Query: 1029 RQRVKELQTILTEAITDMEVD*IKADD 1109
            R+R KELQ++L EAI+DMEV  +K DD
Sbjct: 283  RRRAKELQSVLNEAISDMEVG-LKCDD 308


>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  396 bits (1017), Expect = e-108
 Identities = 222/329 (67%), Positives = 243/329 (73%), Gaps = 9/329 (2%)
 Frame = +3

Query: 132  MSAVNGFGDLSSEMEVDAFRRLFPLRFHERHLLESIRPDARPLGKARDTTLALXXXXXXX 311
            M + N  GDLSSEMEVDAFRRLFPLR+HER LL+SIRPDARPLG+ARDT+LAL       
Sbjct: 1    MVSANVSGDLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASAD 60

Query: 312  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESPDEGCLAIEFHMPPI 491
                                                       ESPDEG +AIEF+MPPI
Sbjct: 61   GSALAKIGCTTMLAAVKMEVMTPPK------------------ESPDEGSIAIEFYMPPI 102

Query: 492  CSPIVRPGRPAELAPVVSKQLSDTILS--------SGMINLKDLCLVSGKAAWMAYLDIY 647
            CSP+VRPGRPAE APVVSKQLSDTIL         SGMINLK+L LVSGKAAWMAYLDIY
Sbjct: 103  CSPLVRPGRPAEEAPVVSKQLSDTILRHVNVVTSFSGMINLKELSLVSGKAAWMAYLDIY 162

Query: 648  CLDADGALFDTALLSAVAAFSHLNIPVVSLNDDGRVVV-SEEIEGEKLGNEPVNKDKRKL 824
            CLDADG+LFD ALL+AVAAFSHL IPVVSLN++GRVVV SEE E  K   EPVNK KRKL
Sbjct: 163  CLDADGSLFDAALLAAVAAFSHLRIPVVSLNEEGRVVVVSEENEEGKSEKEPVNKGKRKL 222

Query: 825  NLRSIPFSLTCILHKQYLLADPTAEEESIMDTLLTVVLDSSCQLVSLYKPGGSFLADNSA 1004
             L S+PFSLTCILHK Y+LADPTAEEESIM+TL+TVVLDSS QLVSLYKPGG  LA  SA
Sbjct: 223  TLSSLPFSLTCILHKNYILADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGPVLAYASA 282

Query: 1005 VQDCISLTRQRVKELQTILTEAITDMEVD 1091
            VQDCI+LTRQRVKEL++IL EAI+DMEVD
Sbjct: 283  VQDCIALTRQRVKELKSILNEAISDMEVD 311


>ref|XP_002532079.1| exosome complex exonuclease rrp43, putative [Ricinus communis]
            gi|223528261|gb|EEF30313.1| exosome complex exonuclease
            rrp43, putative [Ricinus communis]
          Length = 303

 Score =  394 bits (1012), Expect = e-107
 Identities = 210/321 (65%), Positives = 237/321 (73%), Gaps = 1/321 (0%)
 Frame = +3

Query: 132  MSAVNGFGDLSSEMEVDAFRRLFPLRFHERHLLESIRPDARPLGKARDTTLALXXXXXXX 311
            M   N  GDLS+EME DAFRRLFPL FHERHL ESIRPD R LG+ARDTTLAL       
Sbjct: 1    MGLPNVSGDLSTEMEADAFRRLFPLLFHERHLAESIRPDGRSLGRARDTTLALGAVVSAD 60

Query: 312  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESPDEGCLAIEFHMPPI 491
                                                       ESPDEGC+AI+FHMPPI
Sbjct: 61   GSAIAKIGSTTMMAAIKMEVMTPSS------------------ESPDEGCIAIDFHMPPI 102

Query: 492  CSPIVRPGRPAELAPVVSKQLSDTILSSGMINLKDLCLVSGKAAWMAYLDIYCLDADGAL 671
            CSP+VRPGRPAE APVVSKQLSDTI+SS MI+LK+L LVSGKAAWMAYLDIYCLDADG+L
Sbjct: 103  CSPLVRPGRPAEAAPVVSKQLSDTIMSSAMIDLKELSLVSGKAAWMAYLDIYCLDADGSL 162

Query: 672  FDTALLSAVAAFSHLNIPVVSLNDDGR-VVVSEEIEGEKLGNEPVNKDKRKLNLRSIPFS 848
            FD AL SAVAAF++L IP+VSLNDDG+ VVVS+E EG K   E VNK+KRKL LRS+PFS
Sbjct: 163  FDAALFSAVAAFTNLQIPIVSLNDDGKVVVVSDENEGGKREKEAVNKEKRKLTLRSLPFS 222

Query: 849  LTCILHKQYLLADPTAEEESIMDTLLTVVLDSSCQLVSLYKPGGSFLADNSAVQDCISLT 1028
            LTC+LHK Y+LADPTAEEESIM+TL+TVVLDSS +LVS YKPGG  LA  SAVQDC++LT
Sbjct: 223  LTCVLHKNYILADPTAEEESIMETLVTVVLDSSARLVSFYKPGGPVLAYTSAVQDCVALT 282

Query: 1029 RQRVKELQTILTEAITDMEVD 1091
            RQRVKELQ IL EA++ M++D
Sbjct: 283  RQRVKELQNILDEALSGMQID 303


>ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-like [Cucumis sativus]
            gi|449503802|ref|XP_004162184.1| PREDICTED: exosome
            complex component RRP43-like [Cucumis sativus]
          Length = 304

 Score =  392 bits (1007), Expect = e-106
 Identities = 207/314 (65%), Positives = 234/314 (74%), Gaps = 1/314 (0%)
 Frame = +3

Query: 153  GDLSSEMEVDAFRRLFPLRFHERHLLESIRPDARPLGKARDTTLALXXXXXXXXXXXXXX 332
            GDLSS+MEVDAFRRLFP++F+ERHL ESIRPD R LGKARDTT+AL              
Sbjct: 9    GDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKI 68

Query: 333  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESPDEGCLAIEFHMPPICSPIVRP 512
                                                ESPDEGC+A++FHMPP+CSPIVRP
Sbjct: 69   GSTTMLAAIKMEVMTPSV------------------ESPDEGCIALDFHMPPVCSPIVRP 110

Query: 513  GRPAELAPVVSKQLSDTILSSGMINLKDLCLVSGKAAWMAYLDIYCLDADGALFDTALLS 692
            GRPAE APV+SKQLSDTI SSGMI+L++L LV GKAAWMAYLDIYCLDADG+LFD ALLS
Sbjct: 111  GRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLS 170

Query: 693  AVAAFSHLNIPVVSLNDDGRVV-VSEEIEGEKLGNEPVNKDKRKLNLRSIPFSLTCILHK 869
            A AAFSHL IPVV+LNDDG+VV V EE  GE    EPVNK+ RKL L SIPFSLTC+LHK
Sbjct: 171  AAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNSIPFSLTCLLHK 230

Query: 870  QYLLADPTAEEESIMDTLLTVVLDSSCQLVSLYKPGGSFLADNSAVQDCISLTRQRVKEL 1049
            +Y+LADPTAEEES+M+T++TVVLDSS QLVS YKPGGS LA  SAVQDCI+LTRQR KEL
Sbjct: 231  KYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKEL 290

Query: 1050 QTILTEAITDMEVD 1091
            Q IL EAI+ ME+D
Sbjct: 291  QIILDEAISGMEID 304