BLASTX nr result

ID: Bupleurum21_contig00010825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010825
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]   127   4e-27
ref|XP_002280625.1| PREDICTED: uncharacterized protein LOC100258...   122   1e-25
ref|XP_003537129.1| PREDICTED: uncharacterized protein LOC100800...   108   2e-21
ref|XP_003519102.1| PREDICTED: uncharacterized protein LOC100804...   108   3e-21
gb|ABR17753.1| unknown [Picea sitchensis]                             107   5e-21

>emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]
          Length = 659

 Score =  127 bits (320), Expect = 4e-27
 Identities = 61/85 (71%), Positives = 71/85 (83%)
 Frame = -2

Query: 553 LLATFSFIDPIPPFRLKQWQVIVVLFIDALSVSRIPSIAPYMTSRRRLLQKVLDEANISA 374
           LL T SF+D +P FR+KQWQVIV+LFIDALSV RIP++ P+MTSRR L  KV D A +SA
Sbjct: 575 LLDTMSFVDALPSFRMKQWQVIVLLFIDALSVCRIPALTPHMTSRRMLFPKVFDAAQVSA 634

Query: 373 EHYEIMKDLLIPLGRVPYFSAQSGG 299
           E YE+MKDL+IPLGRVP FSAQSGG
Sbjct: 635 EEYEVMKDLIIPLGRVPQFSAQSGG 659


>ref|XP_002280625.1| PREDICTED: uncharacterized protein LOC100258021 [Vitis vinifera]
           gi|296089830|emb|CBI39649.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  122 bits (307), Expect = 1e-25
 Identities = 58/85 (68%), Positives = 70/85 (82%)
 Frame = -2

Query: 553 LLATFSFIDPIPPFRLKQWQVIVVLFIDALSVSRIPSIAPYMTSRRRLLQKVLDEANISA 374
           LL T SF+D +P FR+KQWQVIV+LFIDALSV +IP++ P+M S+R L  KV D A +SA
Sbjct: 575 LLDTMSFVDALPSFRMKQWQVIVLLFIDALSVCQIPALTPHMISKRMLFPKVFDAAQVSA 634

Query: 373 EHYEIMKDLLIPLGRVPYFSAQSGG 299
           E YE+MKDL+IPLGRVP FSAQSGG
Sbjct: 635 EEYEVMKDLIIPLGRVPQFSAQSGG 659


>ref|XP_003537129.1| PREDICTED: uncharacterized protein LOC100800951 [Glycine max]
          Length = 706

 Score =  108 bits (271), Expect = 2e-21
 Identities = 49/86 (56%), Positives = 63/86 (73%)
 Frame = -2

Query: 559 SCLLATFSFIDPIPPFRLKQWQVIVVLFIDALSVSRIPSIAPYMTSRRRLLQKVLDEANI 380
           +CLL T SF+D +P FR KQWQV+ +LFIDALSV R+P++  YMT RR    +VL  + I
Sbjct: 620 ACLLETMSFVDALPAFRTKQWQVVALLFIDALSVCRLPALISYMTDRRASFHRVLSGSQI 679

Query: 379 SAEHYEIMKDLLIPLGRVPYFSAQSG 302
             E YE++KDL +PLGR P+ SAQSG
Sbjct: 680 GMEEYEVLKDLAVPLGRAPHISAQSG 705


>ref|XP_003519102.1| PREDICTED: uncharacterized protein LOC100804112 [Glycine max]
          Length = 706

 Score =  108 bits (269), Expect = 3e-21
 Identities = 48/86 (55%), Positives = 64/86 (74%)
 Frame = -2

Query: 559 SCLLATFSFIDPIPPFRLKQWQVIVVLFIDALSVSRIPSIAPYMTSRRRLLQKVLDEANI 380
           +CLL T SF+D +P FR KQWQV+ +LFIDALSV R+P++  YMT RR    +VL  + I
Sbjct: 620 ACLLETMSFVDALPAFRTKQWQVVALLFIDALSVCRLPALISYMTDRRASFHRVLSGSQI 679

Query: 379 SAEHYEIMKDLLIPLGRVPYFSAQSG 302
             E YE++KDL++PLGR P+ S+QSG
Sbjct: 680 RMEEYEVLKDLVVPLGRAPHISSQSG 705


>gb|ABR17753.1| unknown [Picea sitchensis]
          Length = 668

 Score =  107 bits (267), Expect = 5e-21
 Identities = 51/84 (60%), Positives = 66/84 (78%)
 Frame = -2

Query: 550 LATFSFIDPIPPFRLKQWQVIVVLFIDALSVSRIPSIAPYMTSRRRLLQKVLDEANISAE 371
           L T +FID IPPFR+ QW+VIVVLF+DALSV  IPS+ P + ++R L+ KVL+ A ++ E
Sbjct: 585 LNTMTFIDAIPPFRMNQWRVIVVLFLDALSVHHIPSLGPQIMNKRPLIHKVLEAAEMTYE 644

Query: 370 HYEIMKDLLIPLGRVPYFSAQSGG 299
            Y+ MK+LLIPLGR P FS+QSGG
Sbjct: 645 EYKTMKELLIPLGRCPRFSSQSGG 668


Top