BLASTX nr result

ID: Bupleurum21_contig00010814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010814
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19889.3| unnamed protein product [Vitis vinifera]               69   6e-10
ref|XP_002273443.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    69   6e-10
ref|XP_002306942.1| predicted protein [Populus trichocarpa] gi|2...    69   6e-10
ref|XP_002510554.1| dead box ATP-dependent RNA helicase, putativ...    66   4e-09
ref|XP_002301963.1| predicted protein [Populus trichocarpa] gi|2...    62   7e-08

>emb|CBI19889.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 41/75 (54%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = -3

Query: 288  KKEK-GVSLVDVGYRRXXXXXXXXXXXXXXKILKKPGNKPKRPSRP-QSRTSEMQELFQS 115
            KKEK G+SLV +GYRR              KI +K   K +RPS+  QSRT EMQELFQS
Sbjct: 784  KKEKAGISLVGIGYRRAKAVKAVKKAQDAGKIGRKANKKSERPSQTNQSRTEEMQELFQS 843

Query: 114  DMSEKKQKRVLQGGG 70
            DMSE+KQKR ++G G
Sbjct: 844  DMSERKQKRSIRGAG 858


>ref|XP_002273443.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Vitis
           vinifera]
          Length = 732

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 41/75 (54%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = -3

Query: 288 KKEK-GVSLVDVGYRRXXXXXXXXXXXXXXKILKKPGNKPKRPSRP-QSRTSEMQELFQS 115
           KKEK G+SLV +GYRR              KI +K   K +RPS+  QSRT EMQELFQS
Sbjct: 641 KKEKAGISLVGIGYRRAKAVKAVKKAQDAGKIGRKANKKSERPSQTNQSRTEEMQELFQS 700

Query: 114 DMSEKKQKRVLQGGG 70
           DMSE+KQKR ++G G
Sbjct: 701 DMSERKQKRSIRGAG 715


>ref|XP_002306942.1| predicted protein [Populus trichocarpa] gi|222856391|gb|EEE93938.1|
           predicted protein [Populus trichocarpa]
          Length = 744

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
 Frame = -3

Query: 288 KKEK-GVSLVDVGYRRXXXXXXXXXXXXXXKILKKPGNKPKR--PSRPQSRTSEMQELFQ 118
           KKEK G+SLVD+GYRR              K ++K G+K  +  P R QSRT EMQELFQ
Sbjct: 652 KKEKTGLSLVDLGYRRAKAAKAVKKAMDAGKFVQKKGSKKSKQPPERTQSRTEEMQELFQ 711

Query: 117 SDMSEKKQKRVLQGGG 70
           SDMSEKKQKR   G G
Sbjct: 712 SDMSEKKQKRRSSGTG 727


>ref|XP_002510554.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223551255|gb|EEF52741.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 783

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 39/69 (56%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
 Frame = -3

Query: 288 KKEK-GVSLVDVGYRRXXXXXXXXXXXXXXKILKKPGNKPKRPS-RPQSRTSEMQELFQS 115
           KKEK G+SLVD+GYRR              KI++K   K KRPS R Q RT EM+ELFQS
Sbjct: 679 KKEKTGISLVDLGYRRAKAAKAVKRAVDAGKIIQKAAKKSKRPSQRTQPRTEEMRELFQS 738

Query: 114 DMSEKKQKR 88
           DMSE+KQK+
Sbjct: 739 DMSERKQKK 747


>ref|XP_002301963.1| predicted protein [Populus trichocarpa] gi|222843689|gb|EEE81236.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
 Frame = -3

Query: 288 KKEKGVSLVDVGYRRXXXXXXXXXXXXXXKILKKPGNKPKRP--SRPQSRTSEMQELFQS 115
           K+  G+SLVD+GYRR              KI++K   K  +P   R QSRT EM+ELFQ 
Sbjct: 136 KENTGLSLVDLGYRRVKAAEAVKKALDAGKIVQKKAGKKSKPPPERTQSRTEEMRELFQR 195

Query: 114 DMSEKKQKRVLQGGG 70
           DMSE+KQKR+ Q  G
Sbjct: 196 DMSERKQKRMEQETG 210


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