BLASTX nr result

ID: Bupleurum21_contig00009988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009988
         (1097 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15634.3| unnamed protein product [Vitis vinifera]              433   e-119
ref|XP_002283518.1| PREDICTED: nucleolar protein 56-like [Vitis ...   433   e-119
ref|XP_002318715.1| predicted protein [Populus trichocarpa] gi|2...   431   e-118
ref|XP_003525694.1| PREDICTED: nucleolar protein 56-like isoform...   429   e-118
ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|2...   428   e-117

>emb|CBI15634.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score =  433 bits (1114), Expect = e-119
 Identities = 217/248 (87%), Positives = 233/248 (93%), Gaps = 3/248 (1%)
 Frame = +1

Query: 1   REWYSWHFPELVKIVNDNYLYAKVAKYVDNKSELSEDKLPGLIELVGDEDKAKEIVEAAK 180
           REWYSWHFPELVKIVNDNYLYAKVAK+V+NK ELSEDK+PGL E++GDEDKAKEIVEAAK
Sbjct: 193 REWYSWHFPELVKIVNDNYLYAKVAKFVENKLELSEDKIPGLTEILGDEDKAKEIVEAAK 252

Query: 181 ASMGQDLSPVDLINVKLFAQRVMDLAEYRKKLYDYLVAKMSDIAPNLAALIGEVVGARLI 360
           ASMGQDLSP+DLINV+ FAQRVMDL+EYRKKLY+YLV KM+DIAPNLA+LIGEVVGARLI
Sbjct: 253 ASMGQDLSPIDLINVQQFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLI 312

Query: 361 SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMA 540
           SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMA
Sbjct: 313 SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMA 372

Query: 541 RYLANKCSIASRIDCFLDKNTTAFGDKLREQVEERLDFYDKGVAPRKNIDVMKVAI---G 711
           RYLANKCSIASRIDCF + NTT FG+KLREQVEERL+FYDKG+APRKNIDVMK AI    
Sbjct: 373 RYLANKCSIASRIDCFAESNTTVFGEKLREQVEERLEFYDKGIAPRKNIDVMKAAIEITQ 432

Query: 712 NVDKEEGA 735
           N D E+ A
Sbjct: 433 NNDTEDKA 440


>ref|XP_002283518.1| PREDICTED: nucleolar protein 56-like [Vitis vinifera]
          Length = 558

 Score =  433 bits (1114), Expect = e-119
 Identities = 217/248 (87%), Positives = 233/248 (93%), Gaps = 3/248 (1%)
 Frame = +1

Query: 1   REWYSWHFPELVKIVNDNYLYAKVAKYVDNKSELSEDKLPGLIELVGDEDKAKEIVEAAK 180
           REWYSWHFPELVKIVNDNYLYAKVAK+V+NK ELSEDK+PGL E++GDEDKAKEIVEAAK
Sbjct: 193 REWYSWHFPELVKIVNDNYLYAKVAKFVENKLELSEDKIPGLTEILGDEDKAKEIVEAAK 252

Query: 181 ASMGQDLSPVDLINVKLFAQRVMDLAEYRKKLYDYLVAKMSDIAPNLAALIGEVVGARLI 360
           ASMGQDLSP+DLINV+ FAQRVMDL+EYRKKLY+YLV KM+DIAPNLA+LIGEVVGARLI
Sbjct: 253 ASMGQDLSPIDLINVQQFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLI 312

Query: 361 SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMA 540
           SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMA
Sbjct: 313 SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMA 372

Query: 541 RYLANKCSIASRIDCFLDKNTTAFGDKLREQVEERLDFYDKGVAPRKNIDVMKVAI---G 711
           RYLANKCSIASRIDCF + NTT FG+KLREQVEERL+FYDKG+APRKNIDVMK AI    
Sbjct: 373 RYLANKCSIASRIDCFAESNTTVFGEKLREQVEERLEFYDKGIAPRKNIDVMKAAIEITQ 432

Query: 712 NVDKEEGA 735
           N D E+ A
Sbjct: 433 NNDTEDKA 440


>ref|XP_002318715.1| predicted protein [Populus trichocarpa] gi|222859388|gb|EEE96935.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  431 bits (1108), Expect = e-118
 Identities = 210/247 (85%), Positives = 235/247 (95%)
 Frame = +1

Query: 1   REWYSWHFPELVKIVNDNYLYAKVAKYVDNKSELSEDKLPGLIELVGDEDKAKEIVEAAK 180
           REWYSWHFPELVKIVNDNY+YAK+AK++D+KS+LSEDKLP L +++GDEDKAKE+VEAAK
Sbjct: 193 REWYSWHFPELVKIVNDNYIYAKLAKFIDDKSKLSEDKLPALTDILGDEDKAKEVVEAAK 252

Query: 181 ASMGQDLSPVDLINVKLFAQRVMDLAEYRKKLYDYLVAKMSDIAPNLAALIGEVVGARLI 360
           ASMGQDLSP+DLINV+ FAQRVMDL+EYRKKL++YLV KM+DIAPNLA+LIGE+VGARLI
Sbjct: 253 ASMGQDLSPIDLINVQQFAQRVMDLSEYRKKLHEYLVTKMNDIAPNLASLIGEMVGARLI 312

Query: 361 SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMA 540
           SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMA
Sbjct: 313 SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMA 372

Query: 541 RYLANKCSIASRIDCFLDKNTTAFGDKLREQVEERLDFYDKGVAPRKNIDVMKVAIGNVD 720
           RYLANKCSIASRIDCF + +TT FG+KLREQVEERLDFYDKGVAPRKNIDVMK AIG+ +
Sbjct: 373 RYLANKCSIASRIDCFAESSTTVFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIGSAE 432

Query: 721 KEEGADE 741
            ++ A E
Sbjct: 433 NKDTAME 439


>ref|XP_003525694.1| PREDICTED: nucleolar protein 56-like isoform 1 [Glycine max]
          Length = 550

 Score =  429 bits (1104), Expect = e-118
 Identities = 222/307 (72%), Positives = 247/307 (80%), Gaps = 5/307 (1%)
 Frame = +1

Query: 1    REWYSWHFPELVKIVNDNYLYAKVAKYVDNKSELSEDKLPGLIELVGDEDKAKEIVEAAK 180
            REWYSWHFPELVKIVNDNYLYAKVAK++++K++L+ED +PGL ++VGDEDKAKEIVEAAK
Sbjct: 193  REWYSWHFPELVKIVNDNYLYAKVAKFIEDKAKLAEDTIPGLTDIVGDEDKAKEIVEAAK 252

Query: 181  ASMGQDLSPVDLINVKLFAQRVMDLAEYRKKLYDYLVAKMSDIAPNLAALIGEVVGARLI 360
            ASMGQDLSPVDLINV  FAQRVMDL+EYRK LYDYLVAKM+DIAPNLA LIGEVVGARLI
Sbjct: 253  ASMGQDLSPVDLINVHQFAQRVMDLSEYRKNLYDYLVAKMNDIAPNLATLIGEVVGARLI 312

Query: 361  SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMA 540
            SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASA+NKGRMA
Sbjct: 313  SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRMA 372

Query: 541  RYLANKCSIASRIDCFLDKNTTAFGDKLREQVEERLDFYDKGVAPRKNIDVMKVAIGNVD 720
            RYLANKCSIASRIDCF ++ TT FG+KLREQVEERLDFYDKGVAPRKNIDVM+ AI + +
Sbjct: 373  RYLANKCSIASRIDCFAERGTTVFGEKLREQVEERLDFYDKGVAPRKNIDVMQAAIESAE 432

Query: 721  K-----EEGADEDVNGEXXXXXXXXXXXXXXXEMDVDEVAEDVNGXXXXXXXXXXXXXXY 885
                  E  A  +V+G+               +M VD   + V                 
Sbjct: 433  NKDTEMETEAPAEVSGKKTKKKKQKAAAAEGDDMAVDTNGDAVEDHKSEKKKKKEKRKLE 492

Query: 886  AEMEVDE 906
             EMEVD+
Sbjct: 493  QEMEVDD 499


>ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|222869234|gb|EEF06365.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  428 bits (1100), Expect = e-117
 Identities = 212/254 (83%), Positives = 234/254 (92%), Gaps = 2/254 (0%)
 Frame = +1

Query: 1   REWYSWHFPELVKIVNDNYLYAKVAKYVDNKSELSEDKLPGLIELVGDEDKAKEIVEAAK 180
           REWYSWHFPEL KIVNDNYLYAK+AK++D+KS+LSEDKLP L +L+GDEDKAKE+VEAAK
Sbjct: 193 REWYSWHFPELAKIVNDNYLYAKLAKFIDDKSKLSEDKLPELTDLLGDEDKAKEVVEAAK 252

Query: 181 ASMGQDLSPVDLINVKLFAQRVMDLAEYRKKLYDYLVAKMSDIAPNLAALIGEVVGARLI 360
           ASMGQDLSP+DLINV+ FAQRVMDL+EYRKKL++YL+ KM+DIAPNLA+LIGE+VGARLI
Sbjct: 253 ASMGQDLSPIDLINVQQFAQRVMDLSEYRKKLHEYLITKMNDIAPNLASLIGEMVGARLI 312

Query: 361 SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMA 540
           SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMA
Sbjct: 313 SHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMA 372

Query: 541 RYLANKCSIASRIDCFLDKNTTAFGDKLREQVEERLDFYDKGVAPRKNIDVMKVAIGNVD 720
           RYLANKCSIASRIDCF +  TT FG+KLREQVEERLDFYDKGVAPRKNIDVMK AI + +
Sbjct: 373 RYLANKCSIASRIDCFSENGTTVFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTE 432

Query: 721 KE--EGADEDVNGE 756
            +   GA ED   E
Sbjct: 433 NKVNGGASEDAKSE 446


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