BLASTX nr result

ID: Bupleurum21_contig00009983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009983
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277074.1| PREDICTED: transcription factor TCP13 [Vitis...   241   3e-61
emb|CAN79810.1| hypothetical protein VITISV_014914 [Vitis vinifera]   241   3e-61
emb|CBI21213.3| unnamed protein product [Vitis vinifera]              238   3e-60
ref|XP_002527630.1| transcription factor, putative [Ricinus comm...   226   8e-57
ref|XP_002305384.1| predicted protein [Populus trichocarpa] gi|2...   224   3e-56

>ref|XP_002277074.1| PREDICTED: transcription factor TCP13 [Vitis vinifera]
          Length = 349

 Score =  241 bits (614), Expect = 3e-61
 Identities = 166/355 (46%), Positives = 214/355 (60%), Gaps = 24/355 (6%)
 Frame = -1

Query: 1011 MNSSSREADYAPKQEDKSTTSDGKISKNISSTTSWSRLKDPRIVRVSRAFGGKDRHSKVF 832
            M +SSREAD++ K E     SD +I+KN S++T W RLKDPRIVRVSRA+GGKDRHSKV 
Sbjct: 1    MTTSSREADFSAKLEGDE--SDARIAKNSSTSTPWLRLKDPRIVRVSRAYGGKDRHSKVC 58

Query: 831  TVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQLPPAGN 652
            TVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQ+PP GN
Sbjct: 59   TVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQMPP-GN 117

Query: 651  LSQFHQSMASHVSHEVNAA-ISQSVNRTEGHVNWND--HLELSNYYGNTDGNLMRDHMKS 481
              Q HQ M +  S EV A+  ++   +    ++W D   L  S+++G+     +R   KS
Sbjct: 118  FVQSHQPMIT--SLEVGASQFNKEELKISNGIDWEDPSGLPRSSFWGS--NAFLR--AKS 171

Query: 480  KELVEESEGIDREELMKRKQDHNDAYSSTSNNFLARANVQS--GMLNNAIPIQNSSFLRW 307
            KE+  E+   ++   MKR ++       +SN F  R N  S  G+L++++P     +   
Sbjct: 172  KEVPRENVN-EKVNWMKRNEEGGQV---SSNIFPPRTNQSSLPGLLSSSMPY--GPYYHL 225

Query: 306  DPSNLSLSH------TDQDHLHHNYNXXXXXXXXXXXXXSGSQFVLYQPG---------- 175
            +PSNLSLS       T Q    HN++             SGSQ ++  PG          
Sbjct: 226  EPSNLSLSTLGSHGLTSQTEDLHNFS--VVPLPSSLSLTSGSQVLVCPPGATQSYFPPHV 283

Query: 174  ---VEFDSKQMINFQMLXXXXXXXXXXXXNIPPAFTPPLYTLNQAAAMRPFHLSM 19
               +EFD +Q+ +FQ+L             +P A TPPLY++ Q   +RP HLSM
Sbjct: 284  PTSMEFDPRQINHFQLL------SSSSQNILPNALTPPLYSIGQ--PVRPLHLSM 330


>emb|CAN79810.1| hypothetical protein VITISV_014914 [Vitis vinifera]
          Length = 353

 Score =  241 bits (614), Expect = 3e-61
 Identities = 166/355 (46%), Positives = 214/355 (60%), Gaps = 24/355 (6%)
 Frame = -1

Query: 1011 MNSSSREADYAPKQEDKSTTSDGKISKNISSTTSWSRLKDPRIVRVSRAFGGKDRHSKVF 832
            M +SSREAD++ K E     SD +I+KN S++T W RLKDPRIVRVSRA+GGKDRHSKV 
Sbjct: 1    MTTSSREADFSAKLEGDE--SDARIAKNSSTSTPWLRLKDPRIVRVSRAYGGKDRHSKVC 58

Query: 831  TVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQLPPAGN 652
            TVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQ+PP GN
Sbjct: 59   TVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQMPP-GN 117

Query: 651  LSQFHQSMASHVSHEVNAA-ISQSVNRTEGHVNWND--HLELSNYYGNTDGNLMRDHMKS 481
              Q HQ M +  S EV A+  ++   +    ++W D   L  S+++G+     +R   KS
Sbjct: 118  FVQSHQPMIT--SLEVGASQFNKEELKISNGIDWEDPSGLPRSSFWGS--NAFLR--AKS 171

Query: 480  KELVEESEGIDREELMKRKQDHNDAYSSTSNNFLARANVQS--GMLNNAIPIQNSSFLRW 307
            KE+  E+   ++   MKR ++       +SN F  R N  S  G+L++++P     +   
Sbjct: 172  KEVPRENVN-EKVNWMKRNEEGGQV---SSNIFPPRTNQSSLPGLLSSSMPY--GPYYHL 225

Query: 306  DPSNLSLSH------TDQDHLHHNYNXXXXXXXXXXXXXSGSQFVLYQPG---------- 175
            +PSNLSLS       T Q    HN++             SGSQ ++  PG          
Sbjct: 226  EPSNLSLSTLGSHGLTSQTEDLHNFS--VVPLPSSLSLTSGSQVLVCPPGATQSYFPPHV 283

Query: 174  ---VEFDSKQMINFQMLXXXXXXXXXXXXNIPPAFTPPLYTLNQAAAMRPFHLSM 19
               +EFD +Q+ +FQ+L             +P A TPPLY++ Q   +RP HLSM
Sbjct: 284  PTSMEFDPRQINHFQLL------SSSSQNILPNALTPPLYSIGQ--PVRPLHLSM 330


>emb|CBI21213.3| unnamed protein product [Vitis vinifera]
          Length = 465

 Score =  238 bits (606), Expect = 3e-60
 Identities = 164/353 (46%), Positives = 213/353 (60%), Gaps = 24/353 (6%)
 Frame = -1

Query: 1005 SSSREADYAPKQEDKSTTSDGKISKNISSTTSWSRLKDPRIVRVSRAFGGKDRHSKVFTV 826
            ++SREAD++ K E     SD +I+KN S++T W RLKDPRIVRVSRA+GGKDRHSKV TV
Sbjct: 91   TNSREADFSAKLEGDE--SDARIAKNSSTSTPWLRLKDPRIVRVSRAYGGKDRHSKVCTV 148

Query: 825  RGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQLPPAGNLS 646
            RGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQ+PP GN  
Sbjct: 149  RGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQMPP-GNFV 207

Query: 645  QFHQSMASHVSHEVNAA-ISQSVNRTEGHVNWND--HLELSNYYGNTDGNLMRDHMKSKE 475
            Q HQ M +  S EV A+  ++   +    ++W D   L  S+++G+     +R   KSKE
Sbjct: 208  QSHQPMIT--SLEVGASQFNKEELKISNGIDWEDPSGLPRSSFWGS--NAFLR--AKSKE 261

Query: 474  LVEESEGIDREELMKRKQDHNDAYSSTSNNFLARANVQS--GMLNNAIPIQNSSFLRWDP 301
            +  E+   ++   MKR ++       +SN F  R N  S  G+L++++P     +   +P
Sbjct: 262  VPRENVN-EKVNWMKRNEEGGQV---SSNIFPPRTNQSSLPGLLSSSMPY--GPYYHLEP 315

Query: 300  SNLSLSH------TDQDHLHHNYNXXXXXXXXXXXXXSGSQFVLYQPG------------ 175
            SNLSLS       T Q    HN++             SGSQ ++  PG            
Sbjct: 316  SNLSLSTLGSHGLTSQTEDLHNFS--VVPLPSSLSLTSGSQVLVCPPGATQSYFPPHVPT 373

Query: 174  -VEFDSKQMINFQMLXXXXXXXXXXXXNIPPAFTPPLYTLNQAAAMRPFHLSM 19
             +EFD +Q+ +FQ+L             +P A TPPLY++ Q   +RP HLSM
Sbjct: 374  SMEFDPRQINHFQLL------SSSSQNILPNALTPPLYSIGQ--PVRPLHLSM 418


>ref|XP_002527630.1| transcription factor, putative [Ricinus communis]
            gi|223533004|gb|EEF34769.1| transcription factor,
            putative [Ricinus communis]
          Length = 377

 Score =  226 bits (576), Expect = 8e-57
 Identities = 162/375 (43%), Positives = 205/375 (54%), Gaps = 42/375 (11%)
 Frame = -1

Query: 1011 MNSSSREADYAPKQEDKSTTSDGKISKNISSTTS--WSRLKDPRIVRVSRAFGGKDRHSK 838
            M ++S+E D +P +++ ST   GKI+   SS+TS  W RLKDPRIVRVSRAFGGKDRHSK
Sbjct: 1    MINNSKEED-SPTKKEGSTRDHGKITSKASSSTSTPWLRLKDPRIVRVSRAFGGKDRHSK 59

Query: 837  VFTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQLPPA 658
            V T+RGLRDRRVRLSVPTAIQLYDLQD+LGLNQPSKVVDWLLNAAKHEIDELPPL +PP 
Sbjct: 60   VCTIRGLRDRRVRLSVPTAIQLYDLQDKLGLNQPSKVVDWLLNAAKHEIDELPPLPMPPM 119

Query: 657  GNLSQFHQSMASHVSHEVNAAIS--QSVNRTEGHVNWNDHLELSN-YYGNTDGNLMRDHM 487
             N    HQ ++   SHE+ A+ S  +        +NW+D   L+   + N+D  L+R   
Sbjct: 120  -NFGLNHQMLS---SHELGASQSNKEGFKVNSSSINWDDQGGLTRPNFWNSDA-LLRG-- 172

Query: 486  KSKELVEESEGIDREELMKRKQDHNDAYSSTSNN------------FLARANVQS----G 355
            KSKE+  +S   ++E   KR ++     +   NN               RA   S    G
Sbjct: 173  KSKEVARDSVN-EKENWTKRNEEDEQESNEEGNNSGRTQVPLSSTSLFPRATHSSTWAAG 231

Query: 354  MLNNAIPIQNSSFLRWDPSNLSLSH-------TDQDHLHHNYNXXXXXXXXXXXXXSGSQ 196
             +NN +P    SFL+ +  N   SH          D LH   N             SGSQ
Sbjct: 232  FINNPMPY--GSFLQLEHPNFPFSHMGSHAFSNQTDDLH---NLNAVPLPSTLSLSSGSQ 286

Query: 195  FVLYQPGV--------------EFDSKQMINFQMLXXXXXXXXXXXXNIPPAFTPPLYTL 58
             ++  PGV              E D +QM +FQML              P + TP  Y++
Sbjct: 287  ILVCPPGVPQTYLPSHVNAAAAEIDPRQMNHFQML------ASSTQNLFPNSLTPSSYSM 340

Query: 57   NQAAAMRPFHLSMNP 13
            NQ+A  RPFH S+ P
Sbjct: 341  NQSA--RPFHFSLTP 353


>ref|XP_002305384.1| predicted protein [Populus trichocarpa] gi|222848348|gb|EEE85895.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  224 bits (571), Expect = 3e-56
 Identities = 159/357 (44%), Positives = 205/357 (57%), Gaps = 31/357 (8%)
 Frame = -1

Query: 1011 MNSSSREADYAPKQEDKSTTSDGKISKNISSTTSWSRLKDPRIVRVSRAFGGKDRHSKVF 832
            M +SS++ D   K+E+ S  +DGKISK  SS+  W RLKDPRIVRVSRAFGGKDRHSKV 
Sbjct: 1    MITSSKQVDSPTKKEEDS--NDGKISKASSSSAPWLRLKDPRIVRVSRAFGGKDRHSKVC 58

Query: 831  TVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQLPPAGN 652
            T+RGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPL +PP GN
Sbjct: 59   TIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPMPP-GN 117

Query: 651  LSQFHQSMASHVSHEVNAA-ISQSVNRTEGHVNWNDHLELSN-YYGNTDGNLMRDHMKSK 478
             S  HQ+M    S+EV A+  S+ V +    V+W D    +   + N D  L     KSK
Sbjct: 118  FSLNHQAMLGS-SNEVGASRSSKEVFKMNNGVDWEDTSGFTRPSFWNADAIL---RAKSK 173

Query: 477  ELVEESEGIDREELMKRKQDHNDAYS-------STSNNFLARANVQS--GMLNNAIPIQN 325
            E++ +    ++E   KR ++  +  S       + S++FL RA+  S  G++NNA+P   
Sbjct: 174  EVMTDPVN-EKENWAKRDEEDKEDGSIEGNTAQALSSSFLQRASHSSLPGLINNAMPY-- 230

Query: 324  SSFLRWDPSNLSLSH-------TDQDHLHHNYNXXXXXXXXXXXXXSGSQFVLYQPG--- 175
             SF   +P +  LSH       T    +H   N             SGSQ ++  PG   
Sbjct: 231  GSFFHLEPQSFPLSHMGNHGFATQTGDIH---NLNVVPLSSALSLSSGSQILVCPPGTTQ 287

Query: 174  ----------VEFDSKQMINFQMLXXXXXXXXXXXXNIPPAFTPPLYTLNQAAAMRP 34
                      +E D +Q+ +FQ L             +P + TP  Y ++Q  +MRP
Sbjct: 288  SYFPSHATASMEIDPRQINHFQWL------TPSTQNLLPNSLTPSPYPISQ--SMRP 336


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