BLASTX nr result

ID: Bupleurum21_contig00009981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009981
         (1142 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   576   e-162
emb|CBI38283.3| unnamed protein product [Vitis vinifera]              576   e-162
ref|XP_002530276.1| Ubiquitin carboxyl-terminal hydrolase, putat...   514   e-143
ref|XP_002308863.1| predicted protein [Populus trichocarpa] gi|2...   514   e-143
ref|XP_003554101.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   511   e-142

>ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Vitis
            vinifera]
          Length = 1056

 Score =  576 bits (1484), Expect = e-162
 Identities = 285/381 (74%), Positives = 317/381 (83%), Gaps = 1/381 (0%)
 Frame = -3

Query: 1140 DDYHQEINWHNPFGMVGELAVAFGNLLGKLWTPGRNSIAPRPFKAKLSRFAPQFSGSNQH 961
            +DYH+EINW NP GMVGELA+AFG+LL KLW PGR  +APRPFK KL+RFAPQFSG NQH
Sbjct: 356  EDYHKEINWQNPLGMVGELALAFGDLLRKLWAPGRTPVAPRPFKTKLARFAPQFSGYNQH 415

Query: 960  DSQELLAFLLDGLHEDLNRVKEKPYIQSRDADGRPDEEVADEYWSNHIARNNSIIVDVCQ 781
            DSQELLAFLLDGLHEDLNRVK KPYI+SRDADGRPDEEVADEYW+NHIARN+SIIVDVCQ
Sbjct: 416  DSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQ 475

Query: 780  GQYKSTLICPACDKISVTFDPFMYLSLPLQSXXXXXXXXXXXTCDSSALPAAFTVNVPKQ 601
            GQYKSTL+CP C+KISVTFDPFMYLSLPLQS           TCD SALP+A TV VPKQ
Sbjct: 476  GQYKSTLVCPVCNKISVTFDPFMYLSLPLQSTITRTMTVTVFTCDGSALPSACTVTVPKQ 535

Query: 600  GRCRDLIQALSNACSLKHNEKLLLAEIQNHLIHRFLEDPLVSLSSIKDDDHLAAYKIPKL 421
            GRCRDLIQALS ACS+KHNEKLLLAEI+NHLI RFLEDPL+ LS+IKDDDHLAAYKIPKL
Sbjct: 536  GRCRDLIQALSGACSVKHNEKLLLAEIRNHLIDRFLEDPLILLSTIKDDDHLAAYKIPKL 595

Query: 420  VKNLKFLQLIHRREEQDAGSSQSKTEWRPYGTPLVSPISCDDVITRGDLQSVVRKMLSPM 241
             K+  FLQLIHRREEQ+ G++Q    W+PYGTPLVSPISCDDVITRGD+QS+V  MLSPM
Sbjct: 596  SKSTIFLQLIHRREEQEIGNAQKSFGWKPYGTPLVSPISCDDVITRGDIQSIVYTMLSPM 655

Query: 240  LRTENLGHQDISDTSMSTTALDPPGAVNCTGDTGNAILADSKQESGNSMVTTT-KKLPLQ 64
            LRTE  GH DIS+TS+S  A DP   +  +    ++I +D K   GNS  T T  KLPLQ
Sbjct: 656  LRTERQGHTDISETSISVAASDPSCDITTSEAFTDSIESDLKDMDGNSYKTVTLSKLPLQ 715

Query: 63   LVDENNVCIDLSVGEEKAVKI 1
            LVDENN CIDLSVGEEK +K+
Sbjct: 716  LVDENNACIDLSVGEEKPIKL 736


>emb|CBI38283.3| unnamed protein product [Vitis vinifera]
          Length = 955

 Score =  576 bits (1484), Expect = e-162
 Identities = 285/381 (74%), Positives = 317/381 (83%), Gaps = 1/381 (0%)
 Frame = -3

Query: 1140 DDYHQEINWHNPFGMVGELAVAFGNLLGKLWTPGRNSIAPRPFKAKLSRFAPQFSGSNQH 961
            +DYH+EINW NP GMVGELA+AFG+LL KLW PGR  +APRPFK KL+RFAPQFSG NQH
Sbjct: 356  EDYHKEINWQNPLGMVGELALAFGDLLRKLWAPGRTPVAPRPFKTKLARFAPQFSGYNQH 415

Query: 960  DSQELLAFLLDGLHEDLNRVKEKPYIQSRDADGRPDEEVADEYWSNHIARNNSIIVDVCQ 781
            DSQELLAFLLDGLHEDLNRVK KPYI+SRDADGRPDEEVADEYW+NHIARN+SIIVDVCQ
Sbjct: 416  DSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQ 475

Query: 780  GQYKSTLICPACDKISVTFDPFMYLSLPLQSXXXXXXXXXXXTCDSSALPAAFTVNVPKQ 601
            GQYKSTL+CP C+KISVTFDPFMYLSLPLQS           TCD SALP+A TV VPKQ
Sbjct: 476  GQYKSTLVCPVCNKISVTFDPFMYLSLPLQSTITRTMTVTVFTCDGSALPSACTVTVPKQ 535

Query: 600  GRCRDLIQALSNACSLKHNEKLLLAEIQNHLIHRFLEDPLVSLSSIKDDDHLAAYKIPKL 421
            GRCRDLIQALS ACS+KHNEKLLLAEI+NHLI RFLEDPL+ LS+IKDDDHLAAYKIPKL
Sbjct: 536  GRCRDLIQALSGACSVKHNEKLLLAEIRNHLIDRFLEDPLILLSTIKDDDHLAAYKIPKL 595

Query: 420  VKNLKFLQLIHRREEQDAGSSQSKTEWRPYGTPLVSPISCDDVITRGDLQSVVRKMLSPM 241
             K+  FLQLIHRREEQ+ G++Q    W+PYGTPLVSPISCDDVITRGD+QS+V  MLSPM
Sbjct: 596  SKSTIFLQLIHRREEQEIGNAQKSFGWKPYGTPLVSPISCDDVITRGDIQSIVYTMLSPM 655

Query: 240  LRTENLGHQDISDTSMSTTALDPPGAVNCTGDTGNAILADSKQESGNSMVTTT-KKLPLQ 64
            LRTE  GH DIS+TS+S  A DP   +  +    ++I +D K   GNS  T T  KLPLQ
Sbjct: 656  LRTERQGHTDISETSISVAASDPSCDITTSEAFTDSIESDLKDMDGNSYKTVTLSKLPLQ 715

Query: 63   LVDENNVCIDLSVGEEKAVKI 1
            LVDENN CIDLSVGEEK +K+
Sbjct: 716  LVDENNACIDLSVGEEKPIKL 736


>ref|XP_002530276.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223530208|gb|EEF32116.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 942

 Score =  514 bits (1325), Expect = e-143
 Identities = 256/381 (67%), Positives = 297/381 (77%), Gaps = 1/381 (0%)
 Frame = -3

Query: 1140 DDYHQEINWHNPFGMVGELAVAFGNLLGKLWTPGRNSIAPRPFKAKLSRFAPQFSGSNQH 961
            +DYHQEINW NP GMVGELA+AFG LL KLW PGR  + PR FKAKL+RFAPQFSG NQH
Sbjct: 351  EDYHQEINWQNPLGMVGELAIAFGELLRKLWAPGRAPVPPRQFKAKLARFAPQFSGYNQH 410

Query: 960  DSQELLAFLLDGLHEDLNRVKEKPYIQSRDADGRPDEEVADEYWSNHIARNNSIIVDVCQ 781
            DSQELLAFLLDGLHEDLNRVK KPYI+S+DADGRPDEEVADEYW+NHIARN+SIIVDVCQ
Sbjct: 411  DSQELLAFLLDGLHEDLNRVKHKPYIKSKDADGRPDEEVADEYWANHIARNDSIIVDVCQ 470

Query: 780  GQYKSTLICPACDKISVTFDPFMYLSLPLQSXXXXXXXXXXXTCDSSALPAAFTVNVPKQ 601
            GQYKSTL+CP C+K+SVTFDPFMYLSLPLQS           T D S LP   TV VPKQ
Sbjct: 471  GQYKSTLVCPVCNKVSVTFDPFMYLSLPLQSTTTRSITVTIFTGDGSTLPFPCTVTVPKQ 530

Query: 600  GRCRDLIQALSNACSLKHNEKLLLAEIQNHLIHRFLEDPLVSLSSIKDDDHLAAYKIPKL 421
            GRCRDLI ALSN+CSLK+NE L LAE++NHL  RFLEDPL+SLS+IKDDDHLAAYKIPK 
Sbjct: 531  GRCRDLIHALSNSCSLKNNEDLQLAEVRNHLFQRFLEDPLISLSTIKDDDHLAAYKIPKS 590

Query: 420  VKNLKFLQLIHRREEQDAGSSQSKTEWRPYGTPLVSPISCDDVITRGDLQSVVRKMLSPM 241
             K    L+LIHR ++++   +Q+ T W+P G PL+S I CDDVITRGD+Q+VV KMLSP 
Sbjct: 591  SKKKLILRLIHRHQDRETNDTQTATRWKPCGIPLLSSIPCDDVITRGDVQTVVHKMLSPF 650

Query: 240  LRTENLGHQDISDTSMSTTALDPPGAVNCTGDTGNAILAD-SKQESGNSMVTTTKKLPLQ 64
            LR E+L H DI+D++   +A D      C   +G A     S ++S +S      KLPLQ
Sbjct: 651  LRAESLRHDDIADSNTLVSASD-----ECHDSSGEASTDPVSDKDSSSSKALMLLKLPLQ 705

Query: 63   LVDENNVCIDLSVGEEKAVKI 1
            LVDE++ CIDLSVGEEKA+K+
Sbjct: 706  LVDESDACIDLSVGEEKAIKL 726


>ref|XP_002308863.1| predicted protein [Populus trichocarpa] gi|222854839|gb|EEE92386.1|
            predicted protein [Populus trichocarpa]
          Length = 951

 Score =  514 bits (1325), Expect = e-143
 Identities = 255/380 (67%), Positives = 305/380 (80%)
 Frame = -3

Query: 1140 DDYHQEINWHNPFGMVGELAVAFGNLLGKLWTPGRNSIAPRPFKAKLSRFAPQFSGSNQH 961
            +DYHQEINW NP GMVGELA+AFG LL +LW PGR +IAPR FK KL+RFAPQFSG NQH
Sbjct: 357  EDYHQEINWQNPLGMVGELALAFGELLRRLWAPGRTAIAPRQFKMKLARFAPQFSGYNQH 416

Query: 960  DSQELLAFLLDGLHEDLNRVKEKPYIQSRDADGRPDEEVADEYWSNHIARNNSIIVDVCQ 781
            DSQELLAFLLDGLHEDLNRVK KPY +S+DADGRPDEEVADEYW+NHIARN+SIIVDVCQ
Sbjct: 417  DSQELLAFLLDGLHEDLNRVKHKPYKKSKDADGRPDEEVADEYWANHIARNDSIIVDVCQ 476

Query: 780  GQYKSTLICPACDKISVTFDPFMYLSLPLQSXXXXXXXXXXXTCDSSALPAAFTVNVPKQ 601
            GQYKSTL+CP C KISVTFDPFMYLSLPLQS           TCD SALP + TV VPKQ
Sbjct: 477  GQYKSTLVCPECHKISVTFDPFMYLSLPLQSTTTRSMTVTIFTCDGSALPFSCTVTVPKQ 536

Query: 600  GRCRDLIQALSNACSLKHNEKLLLAEIQNHLIHRFLEDPLVSLSSIKDDDHLAAYKIPKL 421
            GRCRDLI ALS+ACSLK+NE L LAE++NHL  RFLEDPL+SLS IKDDDHL AYKIPK 
Sbjct: 537  GRCRDLINALSSACSLKNNEDLKLAEVRNHLFQRFLEDPLISLSMIKDDDHLVAYKIPKS 596

Query: 420  VKNLKFLQLIHRREEQDAGSSQSKTEWRPYGTPLVSPISCDDVITRGDLQSVVRKMLSPM 241
            +K    ++LIHRR+EQ+ G++Q+   W+P+GTPLVS IS D+VITRGD+Q+VV  MLSP+
Sbjct: 597  LKKTLLIRLIHRRQEQEMGATQAAQHWKPFGTPLVSLISRDEVITRGDIQTVVNTMLSPL 656

Query: 240  LRTENLGHQDISDTSMSTTALDPPGAVNCTGDTGNAILADSKQESGNSMVTTTKKLPLQL 61
            LR+E+L   D S+  +S  A +     + +G+  +  ++DS  + GN++  T  KLPLQL
Sbjct: 657  LRSESLRQADTSEPFLSLAASE-KRRDSSSGEACSNSMSDSVNKDGNAV--TLFKLPLQL 713

Query: 60   VDENNVCIDLSVGEEKAVKI 1
            V+E+N C+DLSVGE+KA+K+
Sbjct: 714  VEESNACVDLSVGEDKAIKL 733


>ref|XP_003554101.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Glycine max]
          Length = 938

 Score =  511 bits (1317), Expect = e-142
 Identities = 259/389 (66%), Positives = 298/389 (76%), Gaps = 9/389 (2%)
 Frame = -3

Query: 1140 DDYHQEINWHNPFGMVGELAVAFGNLLGKLWTPGRNSIAPRPFKAKLSRFAPQFSGSNQH 961
            +DYH+EINW NP GMVGELA+AFG LL KLW PGR  IAPRPFKAKL RFAPQFSG NQH
Sbjct: 350  EDYHREINWQNPLGMVGELALAFGELLRKLWAPGRTPIAPRPFKAKLVRFAPQFSGHNQH 409

Query: 960  DSQELLAFLLDGLHEDLNRVKEKPYIQSRDADGRPDEEVADEYWSNHIARNNSIIVDVCQ 781
            DSQELLAFLLDGLHEDLNRVK KPYI+SRDADGRPDEEVADEYW+NHIARN+SIIVDVCQ
Sbjct: 410  DSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQ 469

Query: 780  GQYKSTLICPACDKISVTFDPFMYLSLPLQSXXXXXXXXXXXTCDSSALPAAFTVNVPKQ 601
            GQYKSTL+CP C+K+SVTFDPFMYLSLPLQ             CD +ALP+A TV VPKQ
Sbjct: 470  GQYKSTLVCPVCNKVSVTFDPFMYLSLPLQPTTNRTMTVTVFACDGAALPSACTVTVPKQ 529

Query: 600  GRCRDLIQALSNACSLKHNEKLLLAEIQNHLIHRFLEDPLVSLSSIKDDDHLAAYKIPKL 421
            GRCRDLIQALSNACSLKHNE+L+L EI+NHLIHR+ EDPL  LS+IKDDD LAAYK+PK+
Sbjct: 530  GRCRDLIQALSNACSLKHNERLVLVEIRNHLIHRYFEDPLQLLSNIKDDDRLAAYKVPKI 589

Query: 420  VKNLKFLQLIHRREEQDAGSSQSKTEWRPYGTPLVSPISCDDVITRGDLQSVVRKMLSPM 241
             KN K+LQLIHRR EQ +  S   + W+PYGTP+VS ISCDD +TRGD+Q +V +MLSP+
Sbjct: 590  DKNTKYLQLIHRRREQ-SSDSHIISGWKPYGTPIVSLISCDDTVTRGDIQVIVNRMLSPL 648

Query: 240  LRTE-NLGHQDISDTSMSTTALDPPGAVNCT-GDTGNAILADSKQESGNSMVTTTK---- 79
            LR   N+     S+TS+     D      C+   + +A  A+    S N   T +K    
Sbjct: 649  LRKGINVEQATTSETSIPKATSD-----QCSFNSSDDACAANMVSNSVNKDTTNSKAPPV 703

Query: 78   ---KLPLQLVDENNVCIDLSVGEEKAVKI 1
                LPL LVD+NN CIDLS+GEEK VK+
Sbjct: 704  PLPTLPLLLVDDNNACIDLSMGEEKVVKL 732


Top