BLASTX nr result

ID: Bupleurum21_contig00009971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009971
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_192830.1| RNA polymerase II transcriptional coactivator K...   151   6e-35
ref|XP_002874654.1| hypothetical protein ARALYDRAFT_489930 [Arab...   149   4e-34
emb|CBI34506.3| unnamed protein product [Vitis vinifera]              149   4e-34
ref|NP_001238108.1| uncharacterized protein LOC100499671 [Glycin...   148   5e-34
gb|AFK46610.1| unknown [Lotus japonicus]                              147   8e-34

>ref|NP_192830.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
           thaliana] gi|145333013|ref|NP_001078372.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana]
           gi|37079408|sp|O65155.1|KELP_ARATH RecName: Full=RNA
           polymerase II transcriptional coactivator KELP
           gi|2997686|gb|AAC08575.1| putative transcriptional
           co-activator [Arabidopsis thaliana]
           gi|3513735|gb|AAC33951.1| contains similarity to RNA
           polymerase II transcription cofactor p15 [Arabidopsis
           thaliana] gi|4539366|emb|CAB40060.1| putative protein
           [Arabidopsis thaliana] gi|7267790|emb|CAB81193.1|
           putative protein [Arabidopsis thaliana]
           gi|21554027|gb|AAM63108.1| putative transcriptional
           coactivator [Arabidopsis thaliana]
           gi|29028806|gb|AAO64782.1| At4g10920 [Arabidopsis
           thaliana] gi|110736559|dbj|BAF00245.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|110738319|dbj|BAF01087.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657543|gb|AEE82943.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana] gi|332657544|gb|AEE82944.1| RNA
           polymerase II transcriptional coactivator KELP
           [Arabidopsis thaliana]
          Length = 165

 Score =  151 bits (382), Expect = 6e-35
 Identities = 77/138 (55%), Positives = 98/138 (71%), Gaps = 6/138 (4%)
 Frame = -1

Query: 397 SNMDETTMYQVRKLASEELGFDLSTPQHKKLVRKIVDNYLSAXXXXXXXXXXXXXDQE-- 224
           S+M E T ++VRKLASE+L  DLS   HK  VR +V+ +L               ++E  
Sbjct: 20  SDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLDEERAREYENSQVNKEEEDG 79

Query: 223 ----GKGSKEYDDEGNLIICHLSDKRKVAVTEFKGKTLVSIREYYTKNGKDLPTSKGISL 56
               GKG+KE+DD+G+LIIC LSDKR+V + EFKGK+LVSIREYY K+GK+LPTSKGISL
Sbjct: 80  DKDCGKGNKEFDDDGDLIICRLSDKRRVTIQEFKGKSLVSIREYYKKDGKELPTSKGISL 139

Query: 55  TAEQWASFKNNVPAIEKA 2
           T EQW++FK N+PAIE A
Sbjct: 140 TDEQWSTFKKNMPAIENA 157


>ref|XP_002874654.1| hypothetical protein ARALYDRAFT_489930 [Arabidopsis lyrata subsp.
           lyrata] gi|297320491|gb|EFH50913.1| hypothetical protein
           ARALYDRAFT_489930 [Arabidopsis lyrata subsp. lyrata]
          Length = 165

 Score =  149 bits (375), Expect = 4e-34
 Identities = 77/138 (55%), Positives = 97/138 (70%), Gaps = 6/138 (4%)
 Frame = -1

Query: 397 SNMDETTMYQVRKLASEELGFDLSTPQHKKLVRKIVDNYLSAXXXXXXXXXXXXXDQE-- 224
           S+M E T ++VR+LASE LG DLS   HK  VR +V+ +L               ++E  
Sbjct: 20  SDMKEMTEFKVRQLASEGLGIDLSEKSHKAFVRSVVEKFLHEERARDYEKSQVNKEEEDG 79

Query: 223 ----GKGSKEYDDEGNLIICHLSDKRKVAVTEFKGKTLVSIREYYTKNGKDLPTSKGISL 56
               GKG+KE+DD+G+LII  LSDKR+V + EFKGKTLVSIREYY K+GK+LPTSKGISL
Sbjct: 80  DKDCGKGNKEFDDDGDLIIWRLSDKRRVTIQEFKGKTLVSIREYYKKDGKELPTSKGISL 139

Query: 55  TAEQWASFKNNVPAIEKA 2
           T EQW++FK N+PAIE A
Sbjct: 140 TDEQWSTFKKNIPAIENA 157


>emb|CBI34506.3| unnamed protein product [Vitis vinifera]
          Length = 142

 Score =  149 bits (375), Expect = 4e-34
 Identities = 72/133 (54%), Positives = 101/133 (75%)
 Frame = -1

Query: 400 NSNMDETTMYQVRKLASEELGFDLSTPQHKKLVRKIVDNYLSAXXXXXXXXXXXXXDQEG 221
           +++MDE T ++VRKLAS++LG +LS P +K+ VR++V+ +L +                 
Sbjct: 19  SADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLHS----------------- 61

Query: 220 KGSKEYDDEGNLIICHLSDKRKVAVTEFKGKTLVSIREYYTKNGKDLPTSKGISLTAEQW 41
            G KEYDD+G+LIIC LSD+R+V + +F+GKTLVSIRE+Y K+GK+LP+SKGISLTAEQW
Sbjct: 62  -GVKEYDDDGDLIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGISLTAEQW 120

Query: 40  ASFKNNVPAIEKA 2
           ++FK NVPAIE+A
Sbjct: 121 SAFKKNVPAIEEA 133


>ref|NP_001238108.1| uncharacterized protein LOC100499671 [Glycine max]
           gi|255625681|gb|ACU13185.1| unknown [Glycine max]
          Length = 163

 Score =  148 bits (374), Expect = 5e-34
 Identities = 77/136 (56%), Positives = 95/136 (69%), Gaps = 4/136 (2%)
 Frame = -1

Query: 397 SNMDETTMYQVRKLASEELGFDLSTPQHKKLVRKIVDNYLSAXXXXXXXXXXXXXDQEGK 218
           S+MDE T  ++RK ASE LG DLS P  K  V+++V  +L               ++E  
Sbjct: 21  SDMDEVTESKIRKQASEHLGLDLSQPYFKAFVKQVVKAFLQEEEQRQKQQQQDEDEEEEL 80

Query: 217 GS----KEYDDEGNLIICHLSDKRKVAVTEFKGKTLVSIREYYTKNGKDLPTSKGISLTA 50
           G     KEYDDEG+LIIC LSDKR+V + +F+GKTLVSIREYY K+GK+LPTSKGISLT 
Sbjct: 81  GGASKGKEYDDEGDLIICRLSDKRRVTIQDFRGKTLVSIREYYKKDGKELPTSKGISLTE 140

Query: 49  EQWASFKNNVPAIEKA 2
           EQW++FK NVPAIEKA
Sbjct: 141 EQWSAFKKNVPAIEKA 156


>gb|AFK46610.1| unknown [Lotus japonicus]
          Length = 160

 Score =  147 bits (372), Expect = 8e-34
 Identities = 77/135 (57%), Positives = 95/135 (70%), Gaps = 3/135 (2%)
 Frame = -1

Query: 397 SNMDETTMYQVRKLASEELGFDLSTPQHKKLVRKIVDNYLSAXXXXXXXXXXXXXDQEGK 218
           SNMDE T  ++RK AS ELG DLS P  K  V+++V  +L                +EG 
Sbjct: 22  SNMDEVTESKIRKQASTELGLDLSVPPFKAFVKQVVQAFLEEKQQQLEEQQQ----EEGG 77

Query: 217 G---SKEYDDEGNLIICHLSDKRKVAVTEFKGKTLVSIREYYTKNGKDLPTSKGISLTAE 47
           G    KE+DD+G+LIIC LS+KRKV + +F+GKTLVSIREYY K+GKDLPTSKGISLT E
Sbjct: 78  GVTQDKEFDDDGDLIICKLSEKRKVTIQDFRGKTLVSIREYYRKDGKDLPTSKGISLTEE 137

Query: 46  QWASFKNNVPAIEKA 2
           QW++FK NVPA+EKA
Sbjct: 138 QWSTFKKNVPAVEKA 152


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