BLASTX nr result

ID: Bupleurum21_contig00009948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009948
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP97493.1| UDP-Glc-4-epimerase [Solanum tuberosum]                108   5e-22
ref|XP_002304478.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
sp|O65780.1|GALE1_CYATE RecName: Full=UDP-glucose 4-epimerase GE...   103   2e-20
dbj|BAH20424.1| AT1G12780 [Arabidopsis thaliana]                      101   7e-20
ref|NP_172738.1| UDP-D-glucose/UDP-D-galactose 4-epimerase 1 [Ar...   101   7e-20

>gb|AAP97493.1| UDP-Glc-4-epimerase [Solanum tuberosum]
          Length = 351

 Score =  108 bits (270), Expect = 5e-22
 Identities = 46/48 (95%), Positives = 48/48 (100%)
 Frame = -3

Query: 264 PGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWASQNPWGYQSKP 121
           PGDATAVYASTEKAEKELGWKAKYG++EMCRDQWKWASQNPWGYQSKP
Sbjct: 304 PGDATAVYASTEKAEKELGWKAKYGINEMCRDQWKWASQNPWGYQSKP 351


>ref|XP_002304478.1| predicted protein [Populus trichocarpa] gi|222841910|gb|EEE79457.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  106 bits (264), Expect = 2e-21
 Identities = 45/48 (93%), Positives = 47/48 (97%)
 Frame = -3

Query: 264 PGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWASQNPWGYQSKP 121
           PGDATAVYASTEKAE+ELGWKAKYGV+EMCRDQWKWAS NPWGYQSKP
Sbjct: 301 PGDATAVYASTEKAERELGWKAKYGVEEMCRDQWKWASNNPWGYQSKP 348


>sp|O65780.1|GALE1_CYATE RecName: Full=UDP-glucose 4-epimerase GEPI42; AltName:
           Full=Galactowaldenase; AltName: Full=UDP-galactose
           4-epimerase gi|3021355|emb|CAA06338.1| UDP-galactose
           4-epimerase [Cyamopsis tetragonoloba]
          Length = 354

 Score =  103 bits (256), Expect = 2e-20
 Identities = 44/47 (93%), Positives = 45/47 (95%)
 Frame = -3

Query: 264 PGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWASQNPWGYQSK 124
           PGDATAVYASTEKAEKELGWKAKYGV+EMCRDQWKWAS NPWGYQ K
Sbjct: 307 PGDATAVYASTEKAEKELGWKAKYGVEEMCRDQWKWASNNPWGYQGK 353


>dbj|BAH20424.1| AT1G12780 [Arabidopsis thaliana]
          Length = 216

 Score =  101 bits (251), Expect = 7e-20
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 261 GDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWASQNPWGYQSK 124
           GDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWA+ NPWGYQ+K
Sbjct: 170 GDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWGYQNK 215


>ref|NP_172738.1| UDP-D-glucose/UDP-D-galactose 4-epimerase 1 [Arabidopsis thaliana]
           gi|12643760|sp|Q42605.2|GALE1_ARATH RecName:
           Full=UDP-glucose 4-epimerase 1; AltName:
           Full=Galactowaldenase 1; AltName: Full=UDP-galactose
           4-epimerase 1 gi|8698725|gb|AAF78483.1|AC012187_3 Strong
           similarity to UDPglucose 4-epimerase from Arabidopsis
           thaliana gi|2129759 and is a member of the NAD dependent
           Epimerase/Dehydratase PF|01370 family. ESTs gb|AI100184,
           gb|T22969, gb|T22968, gb|H76416, gb|AI998807 come from
           this gene [Arabidopsis thaliana]
           gi|12248021|gb|AAG50102.1|AF334724_1 putative uridine
           diphosphate glucose epimerase [Arabidopsis thaliana]
           gi|15809880|gb|AAL06868.1| At1g12780/F13K23_21
           [Arabidopsis thaliana] gi|21539429|gb|AAM53267.1|
           uridine diphosphate glucose epimerase [Arabidopsis
           thaliana] gi|23197648|gb|AAN15351.1| uridine diphosphate
           glucose epimerase [Arabidopsis thaliana]
           gi|332190807|gb|AEE28928.1|
           UDP-D-glucose/UDP-D-galactose 4-epimerase 1 [Arabidopsis
           thaliana]
          Length = 351

 Score =  101 bits (251), Expect = 7e-20
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 261 GDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWASQNPWGYQSK 124
           GDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWA+ NPWGYQ+K
Sbjct: 305 GDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWGYQNK 350


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