BLASTX nr result

ID: Bupleurum21_contig00009919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009919
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520493.1| Transcription elongation factor B polypeptid...   186   2e-45
ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45
ref|XP_002282124.1| PREDICTED: transcription elongation factor B...   184   6e-45
ref|NP_001235513.1| uncharacterized protein LOC100305702 [Glycin...   181   4e-44
ref|XP_004145280.1| PREDICTED: transcription elongation factor B...   181   7e-44

>ref|XP_002520493.1| Transcription elongation factor B polypeptide, putative [Ricinus
           communis] gi|223540335|gb|EEF41906.1| Transcription
           elongation factor B polypeptide, putative [Ricinus
           communis]
          Length = 98

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/98 (92%), Positives = 95/98 (96%)
 Frame = +2

Query: 29  MKKEDTVKLISAEGFEFVVDKKAAMVSQTIRNMLTSPGSFAETEHREVTFPEISTTILEK 208
           M+KEDTVKLISAEGFEFV+DK+AAMVSQTIRNMLTSPGSFAET+H EVTFPEISTTILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIDKEAAMVSQTIRNMLTSPGSFAETQHGEVTFPEISTTILEK 60

Query: 209 ICQYFYWSLQYASGKETEFQIEPELTLELMMAANYLHT 322
           ICQYFYWSLQYA GKETEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFYWSLQYAKGKETEFPIEPELTLELMMAANYLHT 98


>ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|222850557|gb|EEE88104.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score =  185 bits (469), Expect = 4e-45
 Identities = 91/98 (92%), Positives = 95/98 (96%)
 Frame = +2

Query: 29  MKKEDTVKLISAEGFEFVVDKKAAMVSQTIRNMLTSPGSFAETEHREVTFPEISTTILEK 208
           M+KEDTVKLISAEGFEFV+ K+AAMVSQTIRNMLTSPGSFAETEH EVTFPEISTTILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIHKEAAMVSQTIRNMLTSPGSFAETEHGEVTFPEISTTILEK 60

Query: 209 ICQYFYWSLQYASGKETEFQIEPELTLELMMAANYLHT 322
           ICQYFYWSLQYA+GKETEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFYWSLQYANGKETEFPIEPELTLELMMAANYLHT 98


>ref|XP_002282124.1| PREDICTED: transcription elongation factor B polypeptide 1 [Vitis
           vinifera]
          Length = 98

 Score =  184 bits (467), Expect = 6e-45
 Identities = 90/98 (91%), Positives = 95/98 (96%)
 Frame = +2

Query: 29  MKKEDTVKLISAEGFEFVVDKKAAMVSQTIRNMLTSPGSFAETEHREVTFPEISTTILEK 208
           M+KEDTVKLISAEGFEFV+DK+AAMVSQTIRNMLTSPGSFAE EH EVTFPEISTTILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIDKRAAMVSQTIRNMLTSPGSFAEREHGEVTFPEISTTILEK 60

Query: 209 ICQYFYWSLQYASGKETEFQIEPELTLELMMAANYLHT 322
           ICQYFYWSLQ+ASGK+TEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFYWSLQFASGKDTEFPIEPELTLELMMAANYLHT 98


>ref|NP_001235513.1| uncharacterized protein LOC100305702 [Glycine max]
           gi|255626357|gb|ACU13523.1| unknown [Glycine max]
          Length = 98

 Score =  181 bits (460), Expect = 4e-44
 Identities = 90/98 (91%), Positives = 93/98 (94%)
 Frame = +2

Query: 29  MKKEDTVKLISAEGFEFVVDKKAAMVSQTIRNMLTSPGSFAETEHREVTFPEISTTILEK 208
           MKKEDTVKLISAEGFEFVVDK+AAMVSQTI NMLTSPGSFAE +H EVTFPEISTTILEK
Sbjct: 1   MKKEDTVKLISAEGFEFVVDKEAAMVSQTIHNMLTSPGSFAERQHGEVTFPEISTTILEK 60

Query: 209 ICQYFYWSLQYASGKETEFQIEPELTLELMMAANYLHT 322
           ICQYFYW LQ+ASGKETEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFYWHLQFASGKETEFPIEPELTLELMMAANYLHT 98


>ref|XP_004145280.1| PREDICTED: transcription elongation factor B polypeptide 1-like
           [Cucumis sativus] gi|449474021|ref|XP_004154051.1|
           PREDICTED: transcription elongation factor B polypeptide
           1-like [Cucumis sativus]
           gi|449508510|ref|XP_004163332.1| PREDICTED:
           transcription elongation factor B polypeptide 1-like
           [Cucumis sativus]
          Length = 98

 Score =  181 bits (458), Expect = 7e-44
 Identities = 88/98 (89%), Positives = 95/98 (96%)
 Frame = +2

Query: 29  MKKEDTVKLISAEGFEFVVDKKAAMVSQTIRNMLTSPGSFAETEHREVTFPEISTTILEK 208
           MKKEDTVKLISAEGFEFV+ K AAMVSQTIRNMLTSPG+FAE++HREVTFPEISTTILEK
Sbjct: 1   MKKEDTVKLISAEGFEFVIHKDAAMVSQTIRNMLTSPGNFAESQHREVTFPEISTTILEK 60

Query: 209 ICQYFYWSLQYASGKETEFQIEPELTLELMMAANYLHT 322
           ICQYF+W+LQ+ASGKETEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFHWNLQFASGKETEFPIEPELTLELMMAANYLHT 98


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