BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009918
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo...   117   2e-24
ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [S...   115   4e-24
gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold ...   112   4e-23
gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold ...   112   6e-23
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...   111   9e-23

>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
          Length = 1049

 Score =  117 bits (292), Expect = 2e-24
 Identities = 65/200 (32%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
 Frame = -2

Query: 569  FNIALLGKHIWKCIQDPNALVSRILSARYFPGTHILSAEKGQGSSFLWLGIWQAKELLKG 390
            FN A+L +  W+ + DPN+L SR+L  RYFP +   SA K + +SF W  I   +ELLK 
Sbjct: 584  FNQAMLARQGWRILTDPNSLCSRVLKGRYFPDSDFWSAPKPRSASFTWRSILFGRELLKK 643

Query: 389  GFRWVVGDGSDIVATKDQWLVSKRGFTVEDSHWYAGRSERVSSLFYPETKIWDVRRVQEF 210
            G RW VGDGS I  TKD+W+   +   V ++ +       V  L  PE   WD   V+  
Sbjct: 644  GVRWAVGDGSTIKITKDKWIPGVQAGMV-NTRFPIPDDVTVDWLMNPERNAWDEEIVKAV 702

Query: 209  FTADDALAILATRVPQHVARDRIAWSSSNDGRYDVKTGYRYWHDQTVNTTAVNQSRG--- 39
            F  D A  +L   + +H   D ++W     G + V++ Y             +  RG   
Sbjct: 703  FNDDIAREVLQVPISRHGGEDFVSWPHDKRGLFTVRSAYNLVRSNLFVVAQSSNGRGQHS 762

Query: 38   --------WKSVWRLSLPHK 3
                    WK++W ++ P K
Sbjct: 763  GANVDSQFWKALWTINAPGK 782


>ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [Sorghum bicolor]
           gi|241931893|gb|EES05038.1| hypothetical protein
           SORBIDRAFT_04g017846 [Sorghum bicolor]
          Length = 397

 Score =  115 bits (289), Expect = 4e-24
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 18/207 (8%)
 Frame = -2

Query: 569 FNIALLGKHIWKCIQDPNALVSRILSARYFPGTHILSAEKGQGSSFLWLGIWQAKELLKG 390
           FN+A+L K  W+ +++P +L +R+L A+Y P   +L A+  +G S+ W  I    E++K 
Sbjct: 171 FNMAMLAKQGWRLLKEPESLCARVLKAKYHPNGSVLDAQPRRGMSYSWRSILLGLEVVKK 230

Query: 389 GFRWVVGDGSDIVATKDQWL--------VSKRGFTVEDSHWYAGRSERVSSLFYPETKIW 234
           G  W VGDG+ I    D WL        ++ RG ++ +S         V  L  P T  W
Sbjct: 231 GMIWRVGDGAGIHIWSDPWLPRDESRKPLTPRGHSLVES---------VDELIDPHTGTW 281

Query: 233 DVRRVQEFFTADDALAILATRVPQHVARDR-IAWSSSNDGRYDVKTGYRYWHDQTVNTTA 57
           D + V + F  +DA  ILA  +P H  R+  I+W     G + VK+ YR      +N+  
Sbjct: 282 DEQLVSDLFWEEDAAVILA--LPIHQGRENFISWHFEKLGIFSVKSAYRVARKMVINSNT 339

Query: 56  VNQSRG---------WKSVWRLSLPHK 3
            N  +G         WKS+WRL  P+K
Sbjct: 340 ANGQQGSTSRGVDSVWKSIWRLKCPNK 366


>gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 380

 Score =  112 bits (280), Expect = 4e-23
 Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
 Frame = -2

Query: 569 FNIALLGKHIWKCIQDPNALVSRILSARYFPGTHILSAEKGQGSSFLWLGIWQAKELLKG 390
           FN+A++GK  WK I +P++L++++L A+YFP +   SA  G   S++W  +W  ++ LK 
Sbjct: 25  FNLAMIGKQAWKLISNPDSLITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKH 84

Query: 389 GFRWVVGDGSDIVATKDQWL---VSKRGFTVEDSHWYAGRSERVSSLFYPETKIWDVRRV 219
           G +W +G G  I      WL   +  +  T     W A     V  LF P TK W+   +
Sbjct: 85  GLKWSIGMGETISVWNQPWLKDPLCLQPVTEVQIMWDA---LTVGHLFKPNTKEWNENFI 141

Query: 218 QEFFTADDALAILATRVPQHVARDRIAWSSSNDGRYDVKTGYRYWHDQTVNTTAVNQSRG 39
           +  F A+ +  IL T + Q V  D+  W    +G Y V++ YR   ++            
Sbjct: 142 RYVFNAETSNQILQTPLLQSVQVDKATWRFEKNGLYSVRSAYREIINRNDVLLQHRVPGK 201

Query: 38  WKSVWRLSLPHK 3
           W  +W L LP K
Sbjct: 202 WNIIWNLKLPPK 213


>gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 424

 Score =  112 bits (279), Expect = 6e-23
 Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 3/191 (1%)
 Frame = -2

Query: 566 NIALLGKHIWKCIQDPNALVSRILSARYFPGTHILSAEKGQGSSFLWLGIWQAKELLKGG 387
           N+A++GK  WK +  PN+L++++L A+Y+P +    A      S++W G+W+ K++++  
Sbjct: 37  NMAMIGKQAWKLVTSPNSLITKLLKAKYYPRSDYFGASVSHNPSYVWRGLWRVKDMVRRS 96

Query: 386 FRWVVGDGSDIVATKDQWLVSKRGFTVEDSHWYAGRSERVSSLFYPETKIWDVRRVQEFF 207
           F+W +G G  I      WL +    T            RV++L     K W+   +   F
Sbjct: 97  FQWSIGTGESISVWHQLWLGNHEQLTPVTELHSMWSELRVANLLQVNAKQWNKSFINYVF 156

Query: 206 TADDALAILATRVPQHVARDRIAWSSSNDGRYDVKTGYRYWHDQTVNTTAVNQSR---GW 36
               A  I  T +   V +D   W    DG Y +++ Y    D   N TA+NQ R    W
Sbjct: 157 DTGTAEQIYKTPLLPSVQQDIATWRFEKDGNYSIRSAY---CDILNNNTALNQHRVNGSW 213

Query: 35  KSVWRLSLPHK 3
            S+W L LP K
Sbjct: 214 NSIWNLKLPPK 224


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score =  111 bits (277), Expect = 9e-23
 Identities = 59/181 (32%), Positives = 86/181 (47%)
 Frame = -2

Query: 569 FNIALLGKHIWKCIQDPNALVSRILSARYFPGTHILSAEKGQGSSFLWLGIWQAKELLKG 390
           FN+++LGK  WK + D ++L +RIL A+YFP    L A  G   S+ W  +W  + LL  
Sbjct: 393 FNLSMLGKQGWKLLSDSSSLFTRILKAKYFPRRDFLDATLGHNPSYTWRSLWSTQSLLTL 452

Query: 389 GFRWVVGDGSDIVATKDQWLVSKRGFTVEDSHWYAGRSERVSSLFYPETKIWDVRRVQEF 210
           G RW +GDGS I      W+ +        S         V+SL   +   WD   VQ  
Sbjct: 453 GHRWKIGDGSKINVWSMPWIRNLLSLKPSTSPPLHQHDLTVNSLLSADFNSWDTTLVQSL 512

Query: 209 FTADDALAILATRVPQHVARDRIAWSSSNDGRYDVKTGYRYWHDQTVNTTAVNQSRGWKS 30
           F   +A AIL+T +      D   W ++ DG Y VK+ YR   D  +  T +  +  W +
Sbjct: 513 FNDAEAAAILSTPLFARSGSDVRIWKATVDGTYTVKSAYRICSDLLLAATLIRNNLSWNT 572

Query: 29  V 27
           +
Sbjct: 573 I 573