BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009909
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20320.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...    75   7e-12
gb|AFK42054.1| unknown [Lotus japonicus]                               68   7e-10
ref|XP_002262822.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...    68   9e-10
ref|XP_002519056.1| rnf5, putative [Ricinus communis] gi|2235417...    67   2e-09

>emb|CBI20320.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/57 (59%), Positives = 49/57 (85%)
 Frame = -2

Query: 442 VGMFGEMVYARIFGSSDTSLFSYPHASYYPLVRNGSPSPRLRRQELQDDKSLSRISM 272
           +GMFGEMV++R+FGSSDTSLF+YP+ + YPL+   S +PR+RRQE+Q D+ L+R+S+
Sbjct: 241 IGMFGEMVFSRMFGSSDTSLFAYPYPNTYPLM--ASANPRMRRQEMQLDRCLNRVSI 295


>ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Vitis vinifera]
          Length = 253

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/57 (59%), Positives = 49/57 (85%)
 Frame = -2

Query: 442 VGMFGEMVYARIFGSSDTSLFSYPHASYYPLVRNGSPSPRLRRQELQDDKSLSRISM 272
           +GMFGEMV++R+FGSSDTSLF+YP+ + YPL+   S +PR+RRQE+Q D+ L+R+S+
Sbjct: 186 IGMFGEMVFSRMFGSSDTSLFAYPYPNTYPLM--ASANPRMRRQEMQLDRCLNRVSI 240


>gb|AFK42054.1| unknown [Lotus japonicus]
          Length = 248

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = -2

Query: 442 VGMFGEMVYARIFGSSDTSLFSYPHASYYPLVRNGSPSPRLRRQELQDDKSLSRISM 272
           +GMFGEMV  RIFG SD +LF YPH+        GS SPR+RRQE+Q DKSL+R+S+
Sbjct: 187 IGMFGEMVLTRIFGVSDANLFPYPHS--------GSGSPRMRRQEMQIDKSLNRVSI 235


>ref|XP_002262822.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1 isoform 1 [Vitis
           vinifera] gi|359497380|ref|XP_003635497.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1 isoform 2 [Vitis
           vinifera] gi|359497382|ref|XP_003635498.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1 isoform 3 [Vitis
           vinifera] gi|147810574|emb|CAN63097.1| hypothetical
           protein VITISV_013326 [Vitis vinifera]
          Length = 240

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/57 (61%), Positives = 47/57 (82%)
 Frame = -2

Query: 442 VGMFGEMVYARIFGSSDTSLFSYPHASYYPLVRNGSPSPRLRRQELQDDKSLSRISM 272
           VGMFGEMVYAR+FG+S+ SL++YP++ +      GS +PRLRRQE+Q DKSL+RIS+
Sbjct: 176 VGMFGEMVYARVFGNSE-SLYAYPNSYHL----TGSSTPRLRRQEMQADKSLNRISI 227


>ref|XP_002519056.1| rnf5, putative [Ricinus communis] gi|223541719|gb|EEF43267.1| rnf5,
           putative [Ricinus communis]
          Length = 241

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/57 (66%), Positives = 48/57 (84%)
 Frame = -2

Query: 442 VGMFGEMVYARIFGSSDTSLFSYPHASYYPLVRNGSPSPRLRRQELQDDKSLSRISM 272
           VGMFGEMVYAR+FG+SD SL++Y + SY+ +   GS SPRLRRQE+Q DKSL+RIS+
Sbjct: 177 VGMFGEMVYARVFGNSD-SLYAYRN-SYHLM---GSNSPRLRRQEMQADKSLNRISI 228