BLASTX nr result
ID: Bupleurum21_contig00009904
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00009904
(251 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucu... 164 7e-39
emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos] 164 7e-39
ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331... 164 7e-39
gb|ABD61727.1| polyubiquitin [Lupinus albus] 164 7e-39
gb|AAC35858.1| polyubiquitin [Capsicum chinense] 164 7e-39
>ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucumis sativus]
Length = 126
Score = 164 bits (415), Expect = 7e-39
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 32 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 91
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTLADYNIQKES
Sbjct: 92 LIFAGKQLEDGRTLADYNIQKES 114
Score = 73.2 bits (178), Expect = 2e-11
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +1
Query: 145 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 249
+DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES
Sbjct: 4 EDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 38
>emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
Length = 359
Score = 164 bits (415), Expect = 7e-39
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 110 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 169
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTLADYNIQKES
Sbjct: 170 LIFAGKQLEDGRTLADYNIQKES 192
Score = 164 bits (415), Expect = 7e-39
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 186 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 245
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTLADYNIQKES
Sbjct: 246 LIFAGKQLEDGRTLADYNIQKES 268
Score = 164 bits (415), Expect = 7e-39
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 262 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 321
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTLADYNIQKES
Sbjct: 322 LIFAGKQLEDGRTLADYNIQKES 344
Score = 105 bits (262), Expect = 4e-21
Identities = 65/116 (56%), Positives = 65/116 (56%), Gaps = 51/116 (43%)
Frame = +1
Query: 55 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE-------------------------- 156
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTFRVKSRRLKFCLLALLDSATTIES 60
Query: 157 -------------------------GIPPDQQRLIFAGKQLEDGRTLADYNIQKES 249
GIPPDQQRLIFAGKQLEDGRTLADYNIQKES
Sbjct: 61 SLALRSKKSSERREREKESALSRARGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 116
>ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331|gb|AES90473.1|
Ubiquitin [Medicago truncatula]
Length = 533
Score = 164 bits (415), Expect = 7e-39
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 59 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTLADYNIQKES
Sbjct: 119 LIFAGKQLEDGRTLADYNIQKES 141
Score = 164 bits (415), Expect = 7e-39
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 135 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 194
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTLADYNIQKES
Sbjct: 195 LIFAGKQLEDGRTLADYNIQKES 217
Score = 164 bits (415), Expect = 7e-39
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 211 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 270
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTLADYNIQKES
Sbjct: 271 LIFAGKQLEDGRTLADYNIQKES 293
Score = 164 bits (415), Expect = 7e-39
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 363 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 422
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTLADYNIQKES
Sbjct: 423 LIFAGKQLEDGRTLADYNIQKES 445
Score = 164 bits (415), Expect = 7e-39
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 439 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 498
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTLADYNIQKES
Sbjct: 499 LIFAGKQLEDGRTLADYNIQKES 521
Score = 160 bits (405), Expect = 1e-37
Identities = 81/83 (97%), Positives = 82/83 (98%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI DKEGIPPDQQR
Sbjct: 287 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQR 346
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTL+DYNIQKES
Sbjct: 347 LIFAGKQLEDGRTLSDYNIQKES 369
Score = 129 bits (324), Expect = 2e-28
Identities = 65/65 (100%), Positives = 65/65 (100%)
Frame = +1
Query: 55 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 234
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 235 IQKES 249
IQKES
Sbjct: 61 IQKES 65
>gb|ABD61727.1| polyubiquitin [Lupinus albus]
Length = 132
Score = 164 bits (415), Expect = 7e-39
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 17 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 76
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTLADYNIQKES
Sbjct: 77 LIFAGKQLEDGRTLADYNIQKES 99
Score = 80.1 bits (196), Expect = 2e-13
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 120
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT
Sbjct: 93 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 132
>gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 164 bits (415), Expect = 7e-39
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 19 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 78
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTLADYNIQKES
Sbjct: 79 LIFAGKQLEDGRTLADYNIQKES 101
Score = 164 bits (415), Expect = 7e-39
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR
Sbjct: 95 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 154
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTLADYNIQKES
Sbjct: 155 LIFAGKQLEDGRTLADYNIQKES 177
Score = 162 bits (411), Expect = 2e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +1
Query: 1 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 180
YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQR
Sbjct: 171 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQR 230
Query: 181 LIFAGKQLEDGRTLADYNIQKES 249
LIFAGKQLEDGRTLADYNIQKES
Sbjct: 231 LIFAGKQLEDGRTLADYNIQKES 253