BLASTX nr result

ID: Bupleurum21_contig00009878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009878
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...   105   1e-20
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...    96   9e-18
ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine...    96   1e-17
ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-17
dbj|BAF42765.1| S haplotype-specific F-box Protein b [Prunus sal...    94   6e-17

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score =  105 bits (262), Expect = 1e-20
 Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 3/213 (1%)
 Frame = -2

Query: 852 LLYNLPVEMISEILFRLPVRSVLSCQCVCKKFDMLIRSDSFIASHVKHSITSNTNNYASL 673
           +L ++P E++ +I  RLPV+ +L C+C+CK +  LI + +FI++H +++I SN NNY  L
Sbjct: 1   MLDHIPKEVLIKIFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNY--L 58

Query: 672 YIRSVDESFGETCDHMLIEDKNNDELTTSYVRQSNPITT---HVSIIGSCNGLFCADLNT 502
            +R    S  +    +  +D   D++ + Y     P+ +   +  I+GSCNG+ C   N 
Sbjct: 59  ILRHYSRSNKKERFALHFDD---DDMFSEYQELDFPLESSWDYFEIVGSCNGIICLTDNH 115

Query: 501 LEQYGSCIMLWNPVTRKSRFLPKAKIDAPDEDIHPFLAFGFDPETNDYKVVRFFDYYSSI 322
                  I+LWNP    S  LP  +I     ++   L FGFD  TNDYKV+R   Y ++ 
Sbjct: 116 -SHILKRIVLWNPSIGLSVTLPLQRISYKVSNV--VLGFGFDSRTNDYKVIRIVYYSTND 172

Query: 321 PSLSPMRNKCFNMQCEVYRMSTDSWTVFESKGI 223
            SL          + E++ +S  +W +  S  +
Sbjct: 173 DSL------MVPPEVEIFELSRGTWRINNSASV 199


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
           gi|223534840|gb|EEF36529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 371

 Score = 96.3 bits (238), Expect = 9e-18
 Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
 Frame = -2

Query: 852 LLYNLPVEMISEILFRLPVRSVLSCQCVCKKFDMLIRSDSFIASHVKHSITSN--TNNYA 679
           +L N+P E++ EIL RLPV+S+L  +CVC+ +  LI + SFI++H+ HSI  N   ++YA
Sbjct: 1   MLENIPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNNRVHSYA 60

Query: 678 SLYIRSVDESFGETCDHMLIEDKNNDELTTSYVRQSNPI--TTHVSIIGSCNGLFCADLN 505
            +  +SV +        + I+D + DE    Y     P     ++ II SCNGL C   +
Sbjct: 61  LVKQKSVPDCKERFI--LYIDDDSGDEPFRVYQELDFPFKGERYLEIISSCNGLVCLSDS 118

Query: 504 TLEQYGSCIMLWNPVTRKSRFLPKAKIDAPDEDIHPFLAFGFDPETNDYKVVRFFDYYSS 325
              ++     LWNPV RK        +     D    + FGF+ + NDYKVV+   +   
Sbjct: 119 QYARF----YLWNPVIRKC-------LTILSSDSSFIVGFGFEYKKNDYKVVKIMHHPE- 166

Query: 324 IPSLSPMRNKCFNMQCEVYRMSTDSW 247
              ++P+      +  ++Y +ST +W
Sbjct: 167 --KMNPV------LIVKIYDLSTSAW 184


>ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 382

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 65/201 (32%), Positives = 99/201 (49%), Gaps = 2/201 (0%)
 Frame = -2

Query: 843 NLPVEMISEILFRLPVRSVLSCQCVCKKFDMLIRSDSFIASHVKHSITSNTNNYASLYIR 664
           NLPVE+++EIL RLPV+SV+  +  CK +  +I S  FI  H+  S       + SL +R
Sbjct: 3   NLPVEVVTEILSRLPVKSVIRLRSTCKWWRSIIDSRHFILFHLNKS-------HTSLILR 55

Query: 663 SVDESFGETCDHMLIEDKNNDELTTSYVRQSNPITTHVSIIGSCNGLFCADLNTLEQYGS 484
              + +  + D   + D N  EL+   +  SN I     ++GS NGL C     +     
Sbjct: 56  HRSQLY--SLDLKSLLDPNPFELSHPLMCYSNSI----KVLGSSNGLLC-----ISNVAD 104

Query: 483 CIMLWNPVTRKSRFLPKAKIDAPDEDIHPFLAFGF--DPETNDYKVVRFFDYYSSIPSLS 310
            I LWNP  RK R LP  +   P+  +     +GF   P +NDYK++       SI    
Sbjct: 105 DIALWNPFLRKHRILPSDRFHRPESSLFAARVYGFGHHPPSNDYKLL-------SITYFV 157

Query: 309 PMRNKCFNMQCEVYRMSTDSW 247
            +  + F+ Q ++Y + +DSW
Sbjct: 158 DLHKRTFDSQVQLYTLKSDSW 178


>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 90.9 bits (224), Expect(2) = 1e-17
 Identities = 61/205 (29%), Positives = 103/205 (50%)
 Frame = -2

Query: 840 LPVEMISEILFRLPVRSVLSCQCVCKKFDMLIRSDSFIASHVKHSITSNTNNYASLYIRS 661
           L  ++I EIL++LP++S+L C  +CK ++ LI+S +FI  H++H+I S+T+      +R 
Sbjct: 5   LSEDLIQEILYKLPIKSLLRCTSLCKSWNSLIKSPTFIFKHLQHTI-SSTDRQNLFLLRL 63

Query: 660 VDESFGETCDHMLIEDKNNDELTTSYVRQSNPITTHVSIIGSCNGLFCADLNTLEQYGSC 481
                 E     L     N+ +   +  +S+    HV  IGS NGL C   N  +     
Sbjct: 64  CSREREEQYSLRLDNQDFNEHMQLHFPFKSSESYFHV--IGSSNGLICL-ANIFQSLIVS 120

Query: 480 IMLWNPVTRKSRFLPKAKIDAPDEDIHPFLAFGFDPETNDYKVVRFFDYYSSIPSLSPMR 301
            +LWNP+ +K   + K +I  P   ++ F+ FG+D   NDYK++R   +       S  R
Sbjct: 121 FILWNPLIQK-YMIVKPRILGP---VYSFVGFGYDSRANDYKLIRMVSFQK-----SKFR 171

Query: 300 NKCFNMQCEVYRMSTDSWTVFESKG 226
           ++ F  +  +Y ++  SW      G
Sbjct: 172 SENF-PEIALYSLNEGSWRGIRQTG 195



 Score = 25.4 bits (54), Expect(2) = 1e-17
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = -3

Query: 227 GSIHWLASNPTNDNDTCAAVVAFDLKDEELKVIGL 123
           G +HW+A            V+ FD+ DE    I L
Sbjct: 212 GVVHWIAYRADQHEGVSNVVLGFDMSDEIFLEIAL 246


>dbj|BAF42765.1| S haplotype-specific F-box Protein b [Prunus salicina]
          Length = 376

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 6/206 (2%)
 Frame = -2

Query: 831 EMISEILFRLPVRSVLSCQCVCKKFDMLIRSDSFIASHVKHSITSNTNNYASLYIRSVDE 652
           E++ ++L RLP +SV+   C CK +  LI S SF++ H+K ++T + + Y         E
Sbjct: 9   EILIDVLVRLPAKSVVRFLCTCKSWSDLIGSSSFVSIHLKRNVTKHAHVYLLCLHHPNFE 68

Query: 651 SFGETCDHMLIEDKN----NDELTTSYVRQSNPI--TTHVSIIGSCNGLFCADLNTLEQY 490
              +  D   IE+      ++E    +   S+P+  T H  I GS NGL C   + +  +
Sbjct: 69  RQNDNDDPYDIEELQWSLFSNETFEQFSNLSHPLENTEHYRIYGSSNGLVCIS-DEILNF 127

Query: 489 GSCIMLWNPVTRKSRFLPKAKIDAPDEDIHPFLAFGFDPETNDYKVVRFFDYYSSIPSLS 310
            S I +WNP  RK +  P    +   +  H  L FGF P  NDYK VR            
Sbjct: 128 DSPIHIWNPSVRKFK-TPPMSTNINMKFSHVALQFGFHPGVNDYKTVRM----------- 175

Query: 309 PMRNKCFNMQCEVYRMSTDSWTVFES 232
            MR     +  EVY + TDSW + E+
Sbjct: 176 -MRTNKGALAVEVYSLRTDSWKMIEA 200


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