BLASTX nr result
ID: Bupleurum21_contig00009878
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00009878 (898 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm... 105 1e-20 ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm... 96 9e-18 ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine... 96 1e-17 ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2... 91 1e-17 dbj|BAF42765.1| S haplotype-specific F-box Protein b [Prunus sal... 94 6e-17 >ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis] gi|223533120|gb|EEF34878.1| conserved hypothetical protein [Ricinus communis] Length = 379 Score = 105 bits (262), Expect = 1e-20 Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 3/213 (1%) Frame = -2 Query: 852 LLYNLPVEMISEILFRLPVRSVLSCQCVCKKFDMLIRSDSFIASHVKHSITSNTNNYASL 673 +L ++P E++ +I RLPV+ +L C+C+CK + LI + +FI++H +++I SN NNY L Sbjct: 1 MLDHIPKEVLIKIFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNY--L 58 Query: 672 YIRSVDESFGETCDHMLIEDKNNDELTTSYVRQSNPITT---HVSIIGSCNGLFCADLNT 502 +R S + + +D D++ + Y P+ + + I+GSCNG+ C N Sbjct: 59 ILRHYSRSNKKERFALHFDD---DDMFSEYQELDFPLESSWDYFEIVGSCNGIICLTDNH 115 Query: 501 LEQYGSCIMLWNPVTRKSRFLPKAKIDAPDEDIHPFLAFGFDPETNDYKVVRFFDYYSSI 322 I+LWNP S LP +I ++ L FGFD TNDYKV+R Y ++ Sbjct: 116 -SHILKRIVLWNPSIGLSVTLPLQRISYKVSNV--VLGFGFDSRTNDYKVIRIVYYSTND 172 Query: 321 PSLSPMRNKCFNMQCEVYRMSTDSWTVFESKGI 223 SL + E++ +S +W + S + Sbjct: 173 DSL------MVPPEVEIFELSRGTWRINNSASV 199 >ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis] gi|223534840|gb|EEF36529.1| conserved hypothetical protein [Ricinus communis] Length = 371 Score = 96.3 bits (238), Expect = 9e-18 Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 4/206 (1%) Frame = -2 Query: 852 LLYNLPVEMISEILFRLPVRSVLSCQCVCKKFDMLIRSDSFIASHVKHSITSN--TNNYA 679 +L N+P E++ EIL RLPV+S+L +CVC+ + LI + SFI++H+ HSI N ++YA Sbjct: 1 MLENIPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNNRVHSYA 60 Query: 678 SLYIRSVDESFGETCDHMLIEDKNNDELTTSYVRQSNPI--TTHVSIIGSCNGLFCADLN 505 + +SV + + I+D + DE Y P ++ II SCNGL C + Sbjct: 61 LVKQKSVPDCKERFI--LYIDDDSGDEPFRVYQELDFPFKGERYLEIISSCNGLVCLSDS 118 Query: 504 TLEQYGSCIMLWNPVTRKSRFLPKAKIDAPDEDIHPFLAFGFDPETNDYKVVRFFDYYSS 325 ++ LWNPV RK + D + FGF+ + NDYKVV+ + Sbjct: 119 QYARF----YLWNPVIRKC-------LTILSSDSSFIVGFGFEYKKNDYKVVKIMHHPE- 166 Query: 324 IPSLSPMRNKCFNMQCEVYRMSTDSW 247 ++P+ + ++Y +ST +W Sbjct: 167 --KMNPV------LIVKIYDLSTSAW 184 >ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine max] Length = 382 Score = 95.9 bits (237), Expect = 1e-17 Identities = 65/201 (32%), Positives = 99/201 (49%), Gaps = 2/201 (0%) Frame = -2 Query: 843 NLPVEMISEILFRLPVRSVLSCQCVCKKFDMLIRSDSFIASHVKHSITSNTNNYASLYIR 664 NLPVE+++EIL RLPV+SV+ + CK + +I S FI H+ S + SL +R Sbjct: 3 NLPVEVVTEILSRLPVKSVIRLRSTCKWWRSIIDSRHFILFHLNKS-------HTSLILR 55 Query: 663 SVDESFGETCDHMLIEDKNNDELTTSYVRQSNPITTHVSIIGSCNGLFCADLNTLEQYGS 484 + + + D + D N EL+ + SN I ++GS NGL C + Sbjct: 56 HRSQLY--SLDLKSLLDPNPFELSHPLMCYSNSI----KVLGSSNGLLC-----ISNVAD 104 Query: 483 CIMLWNPVTRKSRFLPKAKIDAPDEDIHPFLAFGF--DPETNDYKVVRFFDYYSSIPSLS 310 I LWNP RK R LP + P+ + +GF P +NDYK++ SI Sbjct: 105 DIALWNPFLRKHRILPSDRFHRPESSLFAARVYGFGHHPPSNDYKLL-------SITYFV 157 Query: 309 PMRNKCFNMQCEVYRMSTDSW 247 + + F+ Q ++Y + +DSW Sbjct: 158 DLHKRTFDSQVQLYTLKSDSW 178 >ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1| predicted protein [Populus trichocarpa] Length = 381 Score = 90.9 bits (224), Expect(2) = 1e-17 Identities = 61/205 (29%), Positives = 103/205 (50%) Frame = -2 Query: 840 LPVEMISEILFRLPVRSVLSCQCVCKKFDMLIRSDSFIASHVKHSITSNTNNYASLYIRS 661 L ++I EIL++LP++S+L C +CK ++ LI+S +FI H++H+I S+T+ +R Sbjct: 5 LSEDLIQEILYKLPIKSLLRCTSLCKSWNSLIKSPTFIFKHLQHTI-SSTDRQNLFLLRL 63 Query: 660 VDESFGETCDHMLIEDKNNDELTTSYVRQSNPITTHVSIIGSCNGLFCADLNTLEQYGSC 481 E L N+ + + +S+ HV IGS NGL C N + Sbjct: 64 CSREREEQYSLRLDNQDFNEHMQLHFPFKSSESYFHV--IGSSNGLICL-ANIFQSLIVS 120 Query: 480 IMLWNPVTRKSRFLPKAKIDAPDEDIHPFLAFGFDPETNDYKVVRFFDYYSSIPSLSPMR 301 +LWNP+ +K + K +I P ++ F+ FG+D NDYK++R + S R Sbjct: 121 FILWNPLIQK-YMIVKPRILGP---VYSFVGFGYDSRANDYKLIRMVSFQK-----SKFR 171 Query: 300 NKCFNMQCEVYRMSTDSWTVFESKG 226 ++ F + +Y ++ SW G Sbjct: 172 SENF-PEIALYSLNEGSWRGIRQTG 195 Score = 25.4 bits (54), Expect(2) = 1e-17 Identities = 11/35 (31%), Positives = 15/35 (42%) Frame = -3 Query: 227 GSIHWLASNPTNDNDTCAAVVAFDLKDEELKVIGL 123 G +HW+A V+ FD+ DE I L Sbjct: 212 GVVHWIAYRADQHEGVSNVVLGFDMSDEIFLEIAL 246 >dbj|BAF42765.1| S haplotype-specific F-box Protein b [Prunus salicina] Length = 376 Score = 93.6 bits (231), Expect = 6e-17 Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 6/206 (2%) Frame = -2 Query: 831 EMISEILFRLPVRSVLSCQCVCKKFDMLIRSDSFIASHVKHSITSNTNNYASLYIRSVDE 652 E++ ++L RLP +SV+ C CK + LI S SF++ H+K ++T + + Y E Sbjct: 9 EILIDVLVRLPAKSVVRFLCTCKSWSDLIGSSSFVSIHLKRNVTKHAHVYLLCLHHPNFE 68 Query: 651 SFGETCDHMLIEDKN----NDELTTSYVRQSNPI--TTHVSIIGSCNGLFCADLNTLEQY 490 + D IE+ ++E + S+P+ T H I GS NGL C + + + Sbjct: 69 RQNDNDDPYDIEELQWSLFSNETFEQFSNLSHPLENTEHYRIYGSSNGLVCIS-DEILNF 127 Query: 489 GSCIMLWNPVTRKSRFLPKAKIDAPDEDIHPFLAFGFDPETNDYKVVRFFDYYSSIPSLS 310 S I +WNP RK + P + + H L FGF P NDYK VR Sbjct: 128 DSPIHIWNPSVRKFK-TPPMSTNINMKFSHVALQFGFHPGVNDYKTVRM----------- 175 Query: 309 PMRNKCFNMQCEVYRMSTDSWTVFES 232 MR + EVY + TDSW + E+ Sbjct: 176 -MRTNKGALAVEVYSLRTDSWKMIEA 200