BLASTX nr result

ID: Bupleurum21_contig00009842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009842
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23029.3| unnamed protein product [Vitis vinifera]              350   1e-94
ref|XP_002276600.1| PREDICTED: importin subunit beta-1-like [Vit...   350   1e-94
ref|XP_002526256.1| importin beta-1, putative [Ricinus communis]...   347   1e-93
ref|XP_002515853.1| importin beta-1, putative [Ricinus communis]...   342   4e-92
ref|XP_002318437.1| predicted protein [Populus trichocarpa] gi|2...   340   1e-91

>emb|CBI23029.3| unnamed protein product [Vitis vinifera]
          Length = 950

 Score =  350 bits (899), Expect = 1e-94
 Identities = 175/185 (94%), Positives = 181/185 (97%)
 Frame = -3

Query: 729  YCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSA 550
            YCDGIMT LLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELS+
Sbjct: 766  YCDGIMTLLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSS 825

Query: 549  HTSGVDDEMIEYTNLLRNGILEAYSGIFQGFKNSPKTQLLIPYAPHILQFLDSIYMEKDM 370
            HT+G DDEM EYTNLLRNGILEAYSGIFQGFKNSPKTQLLIPYAPHILQFLDSIYMEKDM
Sbjct: 826  HTAGADDEMTEYTNLLRNGILEAYSGIFQGFKNSPKTQLLIPYAPHILQFLDSIYMEKDM 885

Query: 369  DDVVMKTAIGVLGDLADTLGNNAGALIQQSLSSKDFLNECLTSEDHLIKESAEWAQLAIR 190
            DDVVMKTAIGVLGDLADTLG+NAG+LIQQSLSSKDFLNECL+SEDHLIKESAEWA+LAI 
Sbjct: 886  DDVVMKTAIGVLGDLADTLGSNAGSLIQQSLSSKDFLNECLSSEDHLIKESAEWAKLAIS 945

Query: 189  RAISV 175
            RAISV
Sbjct: 946  RAISV 950


>ref|XP_002276600.1| PREDICTED: importin subunit beta-1-like [Vitis vinifera]
          Length = 871

 Score =  350 bits (899), Expect = 1e-94
 Identities = 175/185 (94%), Positives = 181/185 (97%)
 Frame = -3

Query: 729  YCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSA 550
            YCDGIMT LLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELS+
Sbjct: 687  YCDGIMTLLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSS 746

Query: 549  HTSGVDDEMIEYTNLLRNGILEAYSGIFQGFKNSPKTQLLIPYAPHILQFLDSIYMEKDM 370
            HT+G DDEM EYTNLLRNGILEAYSGIFQGFKNSPKTQLLIPYAPHILQFLDSIYMEKDM
Sbjct: 747  HTAGADDEMTEYTNLLRNGILEAYSGIFQGFKNSPKTQLLIPYAPHILQFLDSIYMEKDM 806

Query: 369  DDVVMKTAIGVLGDLADTLGNNAGALIQQSLSSKDFLNECLTSEDHLIKESAEWAQLAIR 190
            DDVVMKTAIGVLGDLADTLG+NAG+LIQQSLSSKDFLNECL+SEDHLIKESAEWA+LAI 
Sbjct: 807  DDVVMKTAIGVLGDLADTLGSNAGSLIQQSLSSKDFLNECLSSEDHLIKESAEWAKLAIS 866

Query: 189  RAISV 175
            RAISV
Sbjct: 867  RAISV 871


>ref|XP_002526256.1| importin beta-1, putative [Ricinus communis]
            gi|223534421|gb|EEF36125.1| importin beta-1, putative
            [Ricinus communis]
          Length = 871

 Score =  347 bits (891), Expect = 1e-93
 Identities = 173/185 (93%), Positives = 181/185 (97%)
 Frame = -3

Query: 729  YCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSA 550
            +CDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSA
Sbjct: 687  FCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSA 746

Query: 549  HTSGVDDEMIEYTNLLRNGILEAYSGIFQGFKNSPKTQLLIPYAPHILQFLDSIYMEKDM 370
            HT+G DDEMIEYTN LRNGILEAYSGI QGFKNSPKTQLLIPYAPHILQFLDS+YMEKDM
Sbjct: 747  HTAGADDEMIEYTNSLRNGILEAYSGILQGFKNSPKTQLLIPYAPHILQFLDSMYMEKDM 806

Query: 369  DDVVMKTAIGVLGDLADTLGNNAGALIQQSLSSKDFLNECLTSEDHLIKESAEWAQLAIR 190
            DDVVMKTAIGVLGDLADTLG+NAG+LIQQSLSSKDFLNECL+SEDH+IKESAEWA+LAI 
Sbjct: 807  DDVVMKTAIGVLGDLADTLGSNAGSLIQQSLSSKDFLNECLSSEDHMIKESAEWAKLAIC 866

Query: 189  RAISV 175
            RAISV
Sbjct: 867  RAISV 871


>ref|XP_002515853.1| importin beta-1, putative [Ricinus communis]
            gi|223545008|gb|EEF46522.1| importin beta-1, putative
            [Ricinus communis]
          Length = 897

 Score =  342 bits (878), Expect = 4e-92
 Identities = 174/207 (84%), Positives = 186/207 (89%), Gaps = 3/207 (1%)
 Frame = -3

Query: 729  YCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSA 550
            YCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGEN EKYLMYAMPMLQSAAELSA
Sbjct: 687  YCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENVEKYLMYAMPMLQSAAELSA 746

Query: 549  HTSGVDDEMIEYTNLLRNGILEAYSGIFQGFKNSPKTQLLIPYAPHILQFLDSIYMEKDM 370
            HT+G DDEMIEYTN LRNGILEAYSGI QGFKNSPKTQLLIPYAPHILQFLDSIYMEKDM
Sbjct: 747  HTAGADDEMIEYTNSLRNGILEAYSGILQGFKNSPKTQLLIPYAPHILQFLDSIYMEKDM 806

Query: 369  DDVVMKTAIGVLGDLADTLGNNAGALIQQSLSSKDFLNECLTSEDHLIKESAEWAQLAIR 190
            DD+VMKTAIGVLGDLADTLG+NAG+LIQQSLS KDFLNECL+SEDH+IKESAEWA+LAI 
Sbjct: 807  DDLVMKTAIGVLGDLADTLGSNAGSLIQQSLSVKDFLNECLSSEDHMIKESAEWAKLAIT 866

Query: 189  RAIS---V*ASCICLVYFTFNF*SPCM 118
              I    V  SCI +++ +    S C+
Sbjct: 867  EVIDLQVVTNSCISIMFLSEALGSDCV 893


>ref|XP_002318437.1| predicted protein [Populus trichocarpa] gi|222859110|gb|EEE96657.1|
            predicted protein [Populus trichocarpa]
          Length = 871

 Score =  340 bits (873), Expect = 1e-91
 Identities = 171/185 (92%), Positives = 178/185 (96%)
 Frame = -3

Query: 729  YCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDIALAIGENFEKYLMYAMPMLQSAAELSA 550
            YCDGIMTQLLKDLSSNQLHRSVKPPIFS FGDIALAIGENFEKYLMYAMPMLQSAAELSA
Sbjct: 687  YCDGIMTQLLKDLSSNQLHRSVKPPIFSSFGDIALAIGENFEKYLMYAMPMLQSAAELSA 746

Query: 549  HTSGVDDEMIEYTNLLRNGILEAYSGIFQGFKNSPKTQLLIPYAPHILQFLDSIYMEKDM 370
            HTS  DDEM EYTN LRNGILEAYSGI QGFKNSPKTQLLIPYAPHILQFLDS+YMEKDM
Sbjct: 747  HTSVADDEMTEYTNSLRNGILEAYSGILQGFKNSPKTQLLIPYAPHILQFLDSMYMEKDM 806

Query: 369  DDVVMKTAIGVLGDLADTLGNNAGALIQQSLSSKDFLNECLTSEDHLIKESAEWAQLAIR 190
            DDVVMKTAIGVLGDLADTLG+NAG+LIQQSLSSKDFLNECL+S+DH+IKESAEWA+LAI 
Sbjct: 807  DDVVMKTAIGVLGDLADTLGSNAGSLIQQSLSSKDFLNECLSSDDHMIKESAEWAKLAIS 866

Query: 189  RAISV 175
            RAISV
Sbjct: 867  RAISV 871


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