BLASTX nr result

ID: Bupleurum21_contig00009838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009838
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus comm...   119   3e-25
ref|XP_002323383.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_003518182.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   112   3e-23
ref|XP_002265057.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   111   5e-23

>ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|222854300|gb|EEE91847.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  122 bits (305), Expect = 4e-26
 Identities = 67/137 (48%), Positives = 92/137 (67%)
 Frame = -1

Query: 415 NTKAMKNHAMILLKIFLENTNSNMQERFKSDFFKTIVNFLSQDIVTQHGMKAALHIMLGA 236
           N   +K+HA  +LK+ LE  +S++ ER K +FF+ IV  L + I T  G+ AAL ++L A
Sbjct: 199 NYATVKSHAASVLKMLLEEASSSVLERLKPEFFERIVGVLRERI-THQGINAALQVLLNA 257

Query: 235 CSSGLNCLMMVEAGAIFAIIELELAGLIKDIRLSELSLQVLFKLCTSADGRAHFLSHAAA 56
           C  G N  MMVE+GA+F +IELEL     + R +EL+L VLF LC  A+GRA FLSH  +
Sbjct: 258 CPWGRNRKMMVESGAVFELIELELGS--PERRTTELNLGVLFHLCCCAEGRAQFLSHGGS 315

Query: 55  IAVVTRKIMSVSPATDE 5
           IAVV ++I+ VSPA D+
Sbjct: 316 IAVVAKRILRVSPAVDD 332


>ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus communis]
           gi|223536623|gb|EEF38265.1| Spotted leaf protein,
           putative [Ricinus communis]
          Length = 403

 Score =  119 bits (297), Expect = 3e-25
 Identities = 67/144 (46%), Positives = 96/144 (66%)
 Frame = -1

Query: 436 RSCDHDANTKAMKNHAMILLKIFLENTNSNMQERFKSDFFKTIVNFLSQDIVTQHGMKAA 257
           R C  D N   +K+HA+ +LK+  E+ +S++ ER K +FF+TIV  + + I TQ G+ AA
Sbjct: 193 RWCSSD-NHITIKSHAVSVLKMVSEDASSSVLERLKPEFFETIVGVIREKI-TQQGINAA 250

Query: 256 LHIMLGACSSGLNCLMMVEAGAIFAIIELELAGLIKDIRLSELSLQVLFKLCTSADGRAH 77
           L ++  AC  G N +MMV+AGA+F +IELE      + + +EL L +LF LC+ ADGRA 
Sbjct: 251 LKVLSHACPWGRNRIMMVDAGAVFELIELEWR--YPEKKTTELILGILFHLCSCADGRAK 308

Query: 76  FLSHAAAIAVVTRKIMSVSPATDE 5
           FLSH   IAVV ++I+ VSPA D+
Sbjct: 309 FLSHRGGIAVVAKRILKVSPAADD 332


>ref|XP_002323383.1| predicted protein [Populus trichocarpa] gi|222868013|gb|EEF05144.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  116 bits (290), Expect = 2e-24
 Identities = 64/137 (46%), Positives = 93/137 (67%)
 Frame = -1

Query: 415 NTKAMKNHAMILLKIFLENTNSNMQERFKSDFFKTIVNFLSQDIVTQHGMKAALHIMLGA 236
           N   +K+HA+ +L+I LE+ +S++ +R K +FF+ IV  L + I TQ G+K AL ++L A
Sbjct: 198 NYATVKSHAVSVLRILLEDASSSVLKRLKPEFFERIVGVLREKI-TQQGIKDALEVLLDA 256

Query: 235 CSSGLNCLMMVEAGAIFAIIELELAGLIKDIRLSELSLQVLFKLCTSADGRAHFLSHAAA 56
           C    N  MMVE+GA+F +IELEL     + R +EL+L VLF LC  A+GRA FLSH  +
Sbjct: 257 CPWAGNRKMMVESGAVFELIELELGS--PERRTTELNLGVLFHLCCCAEGRAQFLSHGGS 314

Query: 55  IAVVTRKIMSVSPATDE 5
           IAVV ++I+ VSP  ++
Sbjct: 315 IAVVAKRILRVSPEVND 331


>ref|XP_003518182.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           PUB24-like [Glycine max]
          Length = 405

 Score =  112 bits (280), Expect = 3e-23
 Identities = 61/143 (42%), Positives = 93/143 (65%)
 Frame = -1

Query: 433 SCDHDANTKAMKNHAMILLKIFLENTNSNMQERFKSDFFKTIVNFLSQDIVTQHGMKAAL 254
           S D   N+ A+K+HA+ +LKI  ++    + ER K  FF+T+V  L    + Q G+ AAL
Sbjct: 190 SHDEMENSIAVKSHAVQVLKIISKDDMCRVLERLKPSFFETMVKILGHHAIKQQGVNAAL 249

Query: 253 HIMLGACSSGLNCLMMVEAGAIFAIIELELAGLIKDIRLSELSLQVLFKLCTSADGRAHF 74
           H++L A S   + + MVEAG +  +IE+EL  +  + R++EL+L +LF LC+ A+GRA F
Sbjct: 250 HVLLRASSMTRHRITMVEAGLVHELIEIEL--MEPEKRITELTLAILFHLCSCANGRAKF 307

Query: 73  LSHAAAIAVVTRKIMSVSPATDE 5
           LSH  +IAVVT +I+ VS + D+
Sbjct: 308 LSHEGSIAVVTERILKVSASVDD 330


>ref|XP_002265057.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 406

 Score =  111 bits (278), Expect = 5e-23
 Identities = 60/142 (42%), Positives = 95/142 (66%)
 Frame = -1

Query: 430 CDHDANTKAMKNHAMILLKIFLENTNSNMQERFKSDFFKTIVNFLSQDIVTQHGMKAALH 251
           C  D ++ ++K HA+++LK+ ++  +S   ER K +F  ++V  L + I  Q G+ AALH
Sbjct: 194 CKMDGHS-SIKAHALLVLKVMVKTASSTQLERLKPEFLSSVVGVLREGISHQ-GINAALH 251

Query: 250 IMLGACSSGLNCLMMVEAGAIFAIIELELAGLIKDIRLSELSLQVLFKLCTSADGRAHFL 71
           I+L  C  G N + M+E+GAI  +IE+EL   + + R +EL L +LF LC+ ADGR+ FL
Sbjct: 252 ILLDTCPWGRNRMSMIESGAIHDVIEIELG--MPERRTTELILGILFHLCSCADGRSQFL 309

Query: 70  SHAAAIAVVTRKIMSVSPATDE 5
           SH+ AIAVV+ ++++VS A D+
Sbjct: 310 SHSGAIAVVSNRMLNVSIAADD 331


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