BLASTX nr result

ID: Bupleurum21_contig00009824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009824
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284127.1| PREDICTED: uncharacterized protein ycf36 [Vi...   160   1e-37
ref|XP_002533165.1| conserved hypothetical protein [Ricinus comm...   155   3e-36
ref|XP_003517330.1| PREDICTED: uncharacterized protein ycf36-lik...   149   2e-34
ref|XP_003539302.1| PREDICTED: uncharacterized protein ycf36-lik...   147   9e-34
ref|XP_002304310.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33

>ref|XP_002284127.1| PREDICTED: uncharacterized protein ycf36 [Vitis vinifera]
           gi|147834799|emb|CAN75014.1| hypothetical protein
           VITISV_039949 [Vitis vinifera]
           gi|296087349|emb|CBI33723.3| unnamed protein product
           [Vitis vinifera]
          Length = 309

 Score =  160 bits (404), Expect = 1e-37
 Identities = 74/82 (90%), Positives = 76/82 (92%)
 Frame = +1

Query: 7   DGGMSRLPGRSWDPGLEIEVPFEQRPVNEYSSLKDGPLYSWGELSPGSFFLRLGGLWLVT 186
           DGG S +PG SWDPGLEIEVPFEQRPVNEYSSLKDGPLYSWGELSPGSFF+RLGGLWLV 
Sbjct: 49  DGGTSGIPGGSWDPGLEIEVPFEQRPVNEYSSLKDGPLYSWGELSPGSFFIRLGGLWLVA 108

Query: 187 FTVLGAPIAAASFNPGREPLRF 252
           FTVLG PIAAASFNP REPLRF
Sbjct: 109 FTVLGVPIAAASFNPSREPLRF 130


>ref|XP_002533165.1| conserved hypothetical protein [Ricinus communis]
           gi|223527037|gb|EEF29224.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 201

 Score =  155 bits (393), Expect = 3e-36
 Identities = 71/82 (86%), Positives = 75/82 (91%)
 Frame = +1

Query: 7   DGGMSRLPGRSWDPGLEIEVPFEQRPVNEYSSLKDGPLYSWGELSPGSFFLRLGGLWLVT 186
           DGG S  PGRSWDPG+EIEVPFEQRPVNEY+SLKDGPLYSWGEL+PG  FLRLGGLWLVT
Sbjct: 50  DGGRSSFPGRSWDPGMEIEVPFEQRPVNEYASLKDGPLYSWGELAPGPLFLRLGGLWLVT 109

Query: 187 FTVLGAPIAAASFNPGREPLRF 252
           FTVLG PI+AASFNP REPLRF
Sbjct: 110 FTVLGVPISAASFNPEREPLRF 131


>ref|XP_003517330.1| PREDICTED: uncharacterized protein ycf36-like [Glycine max]
          Length = 311

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/83 (85%), Positives = 72/83 (86%)
 Frame = +1

Query: 4   MDGGMSRLPGRSWDPGLEIEVPFEQRPVNEYSSLKDGPLYSWGELSPGSFFLRLGGLWLV 183
           MDG  S   GRSWDPGLEIEVPFEQRPVNEYSSLKDG LYSWGEL PGSFFLRLGGLWL 
Sbjct: 51  MDGETSGSSGRSWDPGLEIEVPFEQRPVNEYSSLKDGILYSWGELGPGSFFLRLGGLWLA 110

Query: 184 TFTVLGAPIAAASFNPGREPLRF 252
            FTVLG PIAAASFNP +EPLRF
Sbjct: 111 VFTVLGGPIAAASFNPSKEPLRF 133


>ref|XP_003539302.1| PREDICTED: uncharacterized protein ycf36-like [Glycine max]
          Length = 311

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/83 (84%), Positives = 71/83 (85%)
 Frame = +1

Query: 4   MDGGMSRLPGRSWDPGLEIEVPFEQRPVNEYSSLKDGPLYSWGELSPGSFFLRLGGLWLV 183
           MDG  S   GRSWDPGLEIEVPFEQRPVNEYSSLKDG LYSWGEL PGSFFLRLG LWL 
Sbjct: 51  MDGETSGSSGRSWDPGLEIEVPFEQRPVNEYSSLKDGILYSWGELGPGSFFLRLGSLWLA 110

Query: 184 TFTVLGAPIAAASFNPGREPLRF 252
            FTVLG PIAAASFNP +EPLRF
Sbjct: 111 VFTVLGGPIAAASFNPSKEPLRF 133


>ref|XP_002304310.1| predicted protein [Populus trichocarpa] gi|222841742|gb|EEE79289.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  147 bits (370), Expect = 1e-33
 Identities = 68/80 (85%), Positives = 71/80 (88%)
 Frame = +1

Query: 13  GMSRLPGRSWDPGLEIEVPFEQRPVNEYSSLKDGPLYSWGELSPGSFFLRLGGLWLVTFT 192
           G S   GRSW+PGLEIEVPFEQRPVNEYSSLK+GPLYSWGEL PG F LRLGGLWLVTFT
Sbjct: 52  GTSSFRGRSWEPGLEIEVPFEQRPVNEYSSLKEGPLYSWGELGPGPFLLRLGGLWLVTFT 111

Query: 193 VLGAPIAAASFNPGREPLRF 252
           VLG PIAAA+FNP REPLRF
Sbjct: 112 VLGVPIAAATFNPSREPLRF 131


Top