BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009820
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containi...    98   8e-19
emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]    98   8e-19
ref|XP_002520126.1| pentatricopeptide repeat-containing protein,...    92   3e-17
ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17
ref|XP_003613604.1| Pentatricopeptide repeat-containing protein ...    82   3e-14

>ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
           [Vitis vinifera] gi|296086418|emb|CBI32007.3| unnamed
           protein product [Vitis vinifera]
          Length = 617

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
 Frame = +1

Query: 31  GQILHTHLLKTGFHAHIHTATALADMYAKFQFLDNALQVFDEVPEPNVALLSVALSGFSA 210
           GQILHT L+KTGFH  I+ ATALADMY K   L  AL+VF+E+P  N+  L+V +SGFS 
Sbjct: 52  GQILHTQLIKTGFHLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSR 111

Query: 211 DGCYKEAFRIFREVRL---RPDSVTIACVL 291
           +G ++EA   F++V L   RP+SVTIA VL
Sbjct: 112 NGYFREALGAFKQVGLGNFRPNSVTIASVL 141


>emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
          Length = 677

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
 Frame = +1

Query: 31  GQILHTHLLKTGFHAHIHTATALADMYAKFQFLDNALQVFDEVPEPNVALLSVALSGFSA 210
           GQILHT L+KTGFH  I+ ATALADMY K   L  AL+VF+E+P  N+  L+V +SGFS 
Sbjct: 112 GQILHTQLIKTGFHLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSR 171

Query: 211 DGCYKEAFRIFREVRL---RPDSVTIACVL 291
           +G ++EA   F++V L   RP+SVTIA VL
Sbjct: 172 NGYFREALGAFKQVGLGNFRPNSVTIASVL 201


>ref|XP_002520126.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540618|gb|EEF42181.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 593

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 3/89 (3%)
 Frame = +1

Query: 34  QILHTHLLKTGFHAHIHTATALADMYAKFQFLDNALQVFDEVPEPNVALLSVALSGFSAD 213
           QI+HTHL+KTGF+ +I+TATAL  MY +   L +A++VFDE+P+ N A  +  +SGFS  
Sbjct: 156 QIIHTHLIKTGFNLNIYTATALTSMYMQLALLPDAMKVFDEMPDRNQASFNATISGFSQK 215

Query: 214 GCYKEAFRIFREVR---LRPDSVTIACVL 291
           GC  EA  +F+E+     RP+SVTIA VL
Sbjct: 216 GCCMEALIVFKEMAFCGFRPNSVTIASVL 244


>ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02750-like [Glycine max]
          Length = 627

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/94 (56%), Positives = 65/94 (69%), Gaps = 5/94 (5%)
 Frame = +1

Query: 25  SHGQILHTHLLKTGFHAHIHTATALADMYAKF--QFLDNALQVFDEVPEPNVALLSVALS 198
           SH Q LH HLLKTGFH+  + ++AL   YA     FLD AL+ FDE+P+PNVA L+ ALS
Sbjct: 54  SHTQTLHAHLLKTGFHSDPYASSALTAAYAANPRHFLD-ALKAFDEMPQPNVASLNAALS 112

Query: 199 GFSADGCYKEAFRIFREV---RLRPDSVTIACVL 291
           GFS +G   EA R+FR      LRP+SVTIAC+L
Sbjct: 113 GFSRNGRRGEALRVFRRAGLGPLRPNSVTIACML 146


>ref|XP_003613604.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355514939|gb|AES96562.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
 Frame = +1

Query: 13  ISRSSHGQILHTHLLKTGFHAHIHTATALADMY-AKFQFLDNALQVFDEVPEPNVALLSV 189
           +S  S  QILH HL KTGFH+H HT+TAL   Y A  +    AL++FDE+P+P +   + 
Sbjct: 48  LSSPSQTQILHAHLFKTGFHSHPHTSTALIASYAANTRSFHYALELFDEMPQPTITAFNA 107

Query: 190 ALSGFSADGCYKEAFRIFREV---RLRPDSVTIACVLS 294
            LSG S +G   +A  +FR++    +RP+SVTI  +LS
Sbjct: 108 VLSGLSRNGPRGQAVWLFRQIGFWNIRPNSVTIVSLLS 145