BLASTX nr result

ID: Bupleurum21_contig00009819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009819
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264306.1| PREDICTED: gamma-secretase subunit APH1-like...   257   2e-66
ref|XP_004140879.1| PREDICTED: gamma-secretase subunit APH1-like...   254   1e-65
ref|XP_002309813.1| predicted protein [Populus trichocarpa] gi|2...   250   1e-64
ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ric...   249   3e-64
gb|AAM65980.1| unknown [Arabidopsis thaliana]                         244   8e-63

>ref|XP_002264306.1| PREDICTED: gamma-secretase subunit APH1-like [Vitis vinifera]
           gi|297743767|emb|CBI36650.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  257 bits (656), Expect = 2e-66
 Identities = 121/181 (66%), Positives = 151/181 (83%)
 Frame = +1

Query: 1   PYFILILISVIFQEGLRILFWRAYRKLEDFLDAFADRVSKPRLYLTDKMQIXXXXXXXXX 180
           PY ILI+ S+ FQEGLRILFW+ Y++LED LDAFADRVSKPRL+LTDKMQI         
Sbjct: 66  PYAILIITSIAFQEGLRILFWKVYKRLEDILDAFADRVSKPRLFLTDKMQIALAGGLGHG 125

Query: 181 XXXXVFFCLGLLTPAFGPATFYVEKCSQMPFFLVSAIIALGFVIIHTFSMVIAFNGFAEE 360
               VFFCL LLTPAFG ATF+V++CS++PFFL+SA+IAL FV IHTFSMVIAFNG+AE 
Sbjct: 126 GAHAVFFCLSLLTPAFGRATFFVDRCSRIPFFLISALIALAFVTIHTFSMVIAFNGYAEG 185

Query: 361 IKMDQFFVPIVHLVAGMLTLVNLASGGCMLGIPMLYLVACVTLVYCGKTVFRRLTKMQSS 540
            K+DQ FVP+VH+VAGM+TL+NLASGGC++GIP+LY +A +T+++CGK V+RRLT+ QS 
Sbjct: 186 NKVDQLFVPVVHMVAGMVTLINLASGGCVIGIPLLYFLAVLTMMHCGKMVWRRLTETQSR 245

Query: 541 Q 543
           +
Sbjct: 246 E 246


>ref|XP_004140879.1| PREDICTED: gamma-secretase subunit APH1-like [Cucumis sativus]
          Length = 244

 Score =  254 bits (649), Expect = 1e-65
 Identities = 121/179 (67%), Positives = 148/179 (82%)
 Frame = +1

Query: 1   PYFILILISVIFQEGLRILFWRAYRKLEDFLDAFADRVSKPRLYLTDKMQIXXXXXXXXX 180
           PY ILIL SVIFQE LR+LFW+ YR+LED LDAFADRVSKPRLYL DKMQI         
Sbjct: 66  PYAILILTSVIFQEVLRVLFWKVYRRLEDMLDAFADRVSKPRLYLADKMQIALAGGLGHG 125

Query: 181 XXXXVFFCLGLLTPAFGPATFYVEKCSQMPFFLVSAIIALGFVIIHTFSMVIAFNGFAEE 360
               VFFCL LLTP+FGPAT++V++CSQ+PFFLVSAIIAL FV IHTFSMVIAFNG++E 
Sbjct: 126 ISHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFNGYSEG 185

Query: 361 IKMDQFFVPIVHLVAGMLTLVNLASGGCMLGIPMLYLVACVTLVYCGKTVFRRLTKMQS 537
            K+DQ+FVP++HL AGM+TLVN ASGGC++ IP+LY++A +TL++CGK V+RRL + +S
Sbjct: 186 KKVDQYFVPVIHLAAGMVTLVNFASGGCVISIPLLYIMAILTLIHCGKMVWRRLMENRS 244


>ref|XP_002309813.1| predicted protein [Populus trichocarpa] gi|222852716|gb|EEE90263.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  250 bits (639), Expect = 1e-64
 Identities = 122/176 (69%), Positives = 146/176 (82%)
 Frame = +1

Query: 1   PYFILILISVIFQEGLRILFWRAYRKLEDFLDAFADRVSKPRLYLTDKMQIXXXXXXXXX 180
           P+ ILIL SV FQEGLRILFW+ Y++LED LDAFADR++KPRL+LTDKM I         
Sbjct: 66  PFAILILTSVSFQEGLRILFWKVYKRLEDILDAFADRLAKPRLFLTDKMLIALAGGLGHG 125

Query: 181 XXXXVFFCLGLLTPAFGPATFYVEKCSQMPFFLVSAIIALGFVIIHTFSMVIAFNGFAEE 360
               VFFCL LLTPAFGPATF+V+KCSQ+PFFLVSAIIAL FV IHT SMVIAFNG+AE 
Sbjct: 126 VAHAVFFCLSLLTPAFGPATFFVDKCSQLPFFLVSAIIALAFVTIHTCSMVIAFNGYAEG 185

Query: 361 IKMDQFFVPIVHLVAGMLTLVNLASGGCMLGIPMLYLVACVTLVYCGKTVFRRLTK 528
            K+DQ+FVP VHLVAGM+TLVN ASGGC++GIP+LY +A +TL++CGK V+RRL++
Sbjct: 186 NKVDQYFVPAVHLVAGMVTLVNFASGGCVVGIPLLYFMAILTLLHCGKMVWRRLSE 241


>ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ricinus communis]
           gi|223525827|gb|EEF28266.1| gamma-secretase subunit
           aph-1, putative [Ricinus communis]
          Length = 249

 Score =  249 bits (637), Expect = 3e-64
 Identities = 120/181 (66%), Positives = 148/181 (81%)
 Frame = +1

Query: 1   PYFILILISVIFQEGLRILFWRAYRKLEDFLDAFADRVSKPRLYLTDKMQIXXXXXXXXX 180
           PY +LI+ SV FQEGLR+LFW+ Y++LED LD FAD++SKPRL+LTDKM I         
Sbjct: 66  PYALLIVTSVCFQEGLRLLFWKIYKRLEDILDDFADKLSKPRLFLTDKMLIAMAGGLGHG 125

Query: 181 XXXXVFFCLGLLTPAFGPATFYVEKCSQMPFFLVSAIIALGFVIIHTFSMVIAFNGFAEE 360
               VFFCL LLTPAFGPATF+++ CSQ+PFFLVSAIIAL FV IHTFSMVIAFNG+AE 
Sbjct: 126 VAHAVFFCLSLLTPAFGPATFFLDSCSQIPFFLVSAIIALAFVTIHTFSMVIAFNGYAEG 185

Query: 361 IKMDQFFVPIVHLVAGMLTLVNLASGGCMLGIPMLYLVACVTLVYCGKTVFRRLTKMQSS 540
            K+DQ FVP+VHLVAG++TL NLASGGC++GIP+LY +A +TL+ CGK V+RRLT+ +S+
Sbjct: 186 NKVDQIFVPVVHLVAGLVTLPNLASGGCVVGIPLLYFIAILTLLQCGKMVWRRLTENRST 245

Query: 541 Q 543
           Q
Sbjct: 246 Q 246


>gb|AAM65980.1| unknown [Arabidopsis thaliana]
          Length = 250

 Score =  244 bits (624), Expect = 8e-63
 Identities = 114/179 (63%), Positives = 145/179 (81%)
 Frame = +1

Query: 1   PYFILILISVIFQEGLRILFWRAYRKLEDFLDAFADRVSKPRLYLTDKMQIXXXXXXXXX 180
           PY +L++ SV FQEGLR LFW+ Y++LED LD+FADR+S+PRL+LTDK+QI         
Sbjct: 66  PYAVLVITSVCFQEGLRFLFWKVYKRLEDVLDSFADRISRPRLFLTDKLQIALAGGLGHG 125

Query: 181 XXXXVFFCLGLLTPAFGPATFYVEKCSQMPFFLVSAIIALGFVIIHTFSMVIAFNGFAEE 360
               VFFCL LLTPAFGPATFYVE+CS++PFFL+SAIIAL FV IHTFSMVIAF G+A+ 
Sbjct: 126 VAHAVFFCLSLLTPAFGPATFYVERCSKVPFFLISAIIALAFVTIHTFSMVIAFEGYAKG 185

Query: 361 IKMDQFFVPIVHLVAGMLTLVNLASGGCMLGIPMLYLVACVTLVYCGKTVFRRLTKMQS 537
            K+DQ  VP++HL AGMLTLVN AS GC++G+P+LYLVA +TLV+CGK V++RL + ++
Sbjct: 186 NKVDQIIVPVIHLTAGMLTLVNFASEGCVIGVPLLYLVASLTLVHCGKMVWQRLLESRN 244


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