BLASTX nr result

ID: Bupleurum21_contig00009810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009810
         (1114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q00268.1|PCNA1_DAUCA RecName: Full=Proliferating cell nuclear...   338   1e-90
gb|AAG24908.1|AF305075_1 proliferating cell nuclear antigen [Nic...   334   2e-89
emb|CAA10108.1| proliferating cell nuclear antigen [Nicotiana ta...   333   3e-89
sp|O82797.1|PCNA_TOBAC RecName: Full=Proliferating cell nuclear ...   332   8e-89
ref|NP_001234844.1| proliferating cell nuclear antigen [Solanum ...   332   1e-88

>sp|Q00268.1|PCNA1_DAUCA RecName: Full=Proliferating cell nuclear antigen; Short=PCNA;
            AltName: Full=Cyclin
          Length = 264

 Score =  338 bits (867), Expect = 1e-90
 Identities = 170/173 (98%), Positives = 173/173 (100%)
 Frame = -3

Query: 1073 MLELRLVQGSLLKKVMDAIKDLVNDANFDCSASGFSLQAMDSSHVALVALLLRSEGFEHY 894
            MLELRLVQGSLLKKVMD+IKDLVNDANFDCSA+GFSLQAMDSSHVALVA+LLRSEGFEHY
Sbjct: 1    MLELRLVQGSLLKKVMDSIKDLVNDANFDCSATGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 893  RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 714
            RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD
Sbjct: 61   RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 713  IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRG 555
            IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRG
Sbjct: 121  IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRG 173



 Score =  120 bits (302), Expect = 5e-25
 Identities = 61/63 (96%), Positives = 62/63 (98%)
 Frame = -2

Query: 366 PVSLTFALRYMNSFTKASPLSSIVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEDEEDE 187
           PVSLTFALRYMNSFTKASPLSS VTISLSSELPVVVEYKIAEMGYIRFYLAPKIE+EEDE
Sbjct: 202 PVSLTFALRYMNSFTKASPLSSTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEEEDE 261

Query: 186 SKP 178
           SKP
Sbjct: 262 SKP 264


>gb|AAG24908.1|AF305075_1 proliferating cell nuclear antigen [Nicotiana benthamiana]
          Length = 264

 Score =  334 bits (857), Expect = 2e-89
 Identities = 167/173 (96%), Positives = 173/173 (100%)
 Frame = -3

Query: 1073 MLELRLVQGSLLKKVMDAIKDLVNDANFDCSASGFSLQAMDSSHVALVALLLRSEGFEHY 894
            MLELRLVQGSLLKKV+++IK+LVNDANFDCSA+GFSLQAMDSSHVALVALLLRSEGFEHY
Sbjct: 1    MLELRLVQGSLLKKVLESIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 893  RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 714
            RCDRNISMGMNLGNMAKMLKCAGNDDIIT+KADDGSDTVTFMFESPTQDKIADFEMKLMD
Sbjct: 61   RCDRNISMGMNLGNMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 713  IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRG 555
            IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRG
Sbjct: 121  IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRG 173



 Score =  113 bits (283), Expect = 7e-23
 Identities = 55/63 (87%), Positives = 62/63 (98%)
 Frame = -2

Query: 366 PVSLTFALRYMNSFTKASPLSSIVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEDEEDE 187
           PVSLTFALRY+NSFTKA+PLS+ VTISLSSELPVVVEYKIAEMGYIRFYLAPKIE++E+E
Sbjct: 202 PVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEEE 261

Query: 186 SKP 178
           +KP
Sbjct: 262 TKP 264


>emb|CAA10108.1| proliferating cell nuclear antigen [Nicotiana tabacum]
          Length = 264

 Score =  333 bits (855), Expect = 3e-89
 Identities = 167/173 (96%), Positives = 172/173 (99%)
 Frame = -3

Query: 1073 MLELRLVQGSLLKKVMDAIKDLVNDANFDCSASGFSLQAMDSSHVALVALLLRSEGFEHY 894
            MLELRLVQGSLLKKV+++IKDLVNDANFDCSA+GFSLQAMDSSHVALVALLLRSEGFEHY
Sbjct: 1    MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 893  RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 714
            RCDRNISMGMNLGNMAKMLKCAGNDDIIT+KADDGSDTVTFMFESPTQDKIADFEMKLMD
Sbjct: 61   RCDRNISMGMNLGNMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 713  IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRG 555
            IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGD VVISVTKEGVKFSTRG
Sbjct: 121  IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDQVVISVTKEGVKFSTRG 173



 Score =  113 bits (283), Expect = 7e-23
 Identities = 55/63 (87%), Positives = 62/63 (98%)
 Frame = -2

Query: 366 PVSLTFALRYMNSFTKASPLSSIVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEDEEDE 187
           PVSLTFALRY+NSFTKA+PLS+ VTISLSSELPVVVEYKIAEMGYIRFYLAPKIE++E+E
Sbjct: 202 PVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEEE 261

Query: 186 SKP 178
           +KP
Sbjct: 262 TKP 264


>sp|O82797.1|PCNA_TOBAC RecName: Full=Proliferating cell nuclear antigen; Short=PCNA
            gi|3366661|gb|AAC27992.1| proliferating cell nuclear
            antigen [Nicotiana tabacum] gi|3514105|gb|AAC34126.1|
            proliferating cell nuclear antigen [Nicotiana tabacum]
            gi|4586306|dbj|BAA76349.1| proliferating cell nuclear
            antigen [Nicotiana tabacum]
          Length = 264

 Score =  332 bits (852), Expect = 8e-89
 Identities = 166/173 (95%), Positives = 172/173 (99%)
 Frame = -3

Query: 1073 MLELRLVQGSLLKKVMDAIKDLVNDANFDCSASGFSLQAMDSSHVALVALLLRSEGFEHY 894
            MLELRLVQGSLLKKV+++IKDLVNDANFDCSA+GFSLQAMDSSHVALVALLLRSEGFEHY
Sbjct: 1    MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 893  RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 714
            RCDRNISMGMNL NMAKMLKCAGNDDIIT+KADDGSDTVTFMFESPTQDKIADFEMKLMD
Sbjct: 61   RCDRNISMGMNLANMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 713  IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRG 555
            IDSEHLGIPEAEYHAIVRMPSAEF+RICKDLSSIGDTVVISVTKEGVKFSTRG
Sbjct: 121  IDSEHLGIPEAEYHAIVRMPSAEFSRICKDLSSIGDTVVISVTKEGVKFSTRG 173



 Score =  113 bits (283), Expect = 7e-23
 Identities = 55/63 (87%), Positives = 62/63 (98%)
 Frame = -2

Query: 366 PVSLTFALRYMNSFTKASPLSSIVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEDEEDE 187
           PVSLTFALRY+NSFTKA+PLS+ VTISLSSELPVVVEYKIAEMGYIRFYLAPKIE++E+E
Sbjct: 202 PVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEEE 261

Query: 186 SKP 178
           +KP
Sbjct: 262 TKP 264


>ref|NP_001234844.1| proliferating cell nuclear antigen [Solanum lycopersicum]
            gi|25005275|emb|CAD56690.1| proliferating cell nuclear
            antigen [Solanum lycopersicum]
          Length = 264

 Score =  332 bits (851), Expect = 1e-88
 Identities = 167/173 (96%), Positives = 171/173 (98%)
 Frame = -3

Query: 1073 MLELRLVQGSLLKKVMDAIKDLVNDANFDCSASGFSLQAMDSSHVALVALLLRSEGFEHY 894
            MLELRLVQGSLLKKV+++IKDLVNDANFDCSA+GFSLQAMDSSHVALVALLLRSEGFEHY
Sbjct: 1    MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 893  RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 714
            RCDRNISMGMNL NMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD
Sbjct: 61   RCDRNISMGMNLTNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 713  IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRG 555
            IDSEHLGIPEAEYHAIVRMPSAEF RICKDLSSIGDTVVISVTKEGVKFSTRG
Sbjct: 121  IDSEHLGIPEAEYHAIVRMPSAEFGRICKDLSSIGDTVVISVTKEGVKFSTRG 173



 Score =  113 bits (282), Expect = 1e-22
 Identities = 54/63 (85%), Positives = 62/63 (98%)
 Frame = -2

Query: 366 PVSLTFALRYMNSFTKASPLSSIVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEDEEDE 187
           PVSLTFALRY+NSFTKASPLS+ VTISLSSELPVVVEYKIAEMGY+R+YLAPKIE++E+E
Sbjct: 202 PVSLTFALRYLNSFTKASPLSNTVTISLSSELPVVVEYKIAEMGYVRYYLAPKIEEDEEE 261

Query: 186 SKP 178
           +KP
Sbjct: 262 TKP 264


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