BLASTX nr result

ID: Bupleurum21_contig00009782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009782
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30664.3| unnamed protein product [Vitis vinifera]               72   4e-11
ref|XP_002316836.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002867986.1| hypothetical protein ARALYDRAFT_493005 [Arab...    67   2e-09
ref|XP_002522549.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
gb|AAU44512.1| hypothetical protein AT4G18540 [Arabidopsis thali...    66   3e-09

>emb|CBI30664.3| unnamed protein product [Vitis vinifera]
          Length = 530

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
 Frame = +2

Query: 89  RVPMANQEKLVKFSSCRGVAFEIKPHLDPFSIKHTPKPILEEAQPPSLRFRFPWG--SSS 262
           +  M + EK  +FSSCRGVAFEIKPH DPF++   P P++ + +  S RF FPW    S 
Sbjct: 42  KTSMKSPEKFPRFSSCRGVAFEIKPHSDPFAV---PTPLVVDGRCGSNRFWFPWNQDGSF 98

Query: 263 KIVPTSNMSFRTASRASSHFC 325
           +  P+ ++  R+ SR SSHFC
Sbjct: 99  RAYPSDSLG-RSMSRISSHFC 118


>ref|XP_002316836.1| predicted protein [Populus trichocarpa] gi|222859901|gb|EEE97448.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/71 (56%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
 Frame = +2

Query: 119 VKFSSCRGVAFEIKPHLDPFSIKHTPKPILEEAQPPSLRFRFPW--GSSSKIVPTSNMSF 292
           V+FSSCRGVAFEIKPH +PF+I       L+     S R  FPW  GSSSK+ P+S    
Sbjct: 5   VRFSSCRGVAFEIKPHENPFAITAPSNDELK----GSKRIWFPWPLGSSSKVFPSS--II 58

Query: 293 RTASRASSHFC 325
           R+ SRASSHFC
Sbjct: 59  RSTSRASSHFC 69


>ref|XP_002867986.1| hypothetical protein ARALYDRAFT_493005 [Arabidopsis lyrata subsp.
           lyrata] gi|297313822|gb|EFH44245.1| hypothetical protein
           ARALYDRAFT_493005 [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/74 (51%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
 Frame = +2

Query: 119 VKFSSCRGVAFEIKPHLDPFSIKHTP--KPILEEAQPPSLRFRFPWG---SSSKIVPTSN 283
           V+FSSCRGVAFEIKPH +PF++  T   +    E +  S RFR PW    ++SK+ PTS 
Sbjct: 7   VRFSSCRGVAFEIKPHANPFAVVTTDQNRYANAEREGTSSRFRLPWDFMRNASKVFPTSI 66

Query: 284 MSFRTASRASSHFC 325
               + SRASSHFC
Sbjct: 67  Q--HSMSRASSHFC 78


>ref|XP_002522549.1| conserved hypothetical protein [Ricinus communis]
           gi|223538240|gb|EEF39849.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 551

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/72 (54%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
 Frame = +2

Query: 119 VKFSSCRGVAFEIKPHLDPFSIKHTPKPILEEAQPPSLRFRFPW---GSSSKIVPTSNMS 289
           V+FSSCRGVAFEIKPH DPF+I     P   +    S RF   W   GSSSK+ P+S   
Sbjct: 5   VRFSSCRGVAFEIKPHPDPFAIS---APSNNDEPKGSNRFWLSWFQAGSSSKVFPSSVQ- 60

Query: 290 FRTASRASSHFC 325
            R+ SR SSHFC
Sbjct: 61  -RSVSRGSSHFC 71


>gb|AAU44512.1| hypothetical protein AT4G18540 [Arabidopsis thaliana]
           gi|52354385|gb|AAU44513.1| hypothetical protein
           AT4G18540 [Arabidopsis thaliana]
           gi|52354387|gb|AAU44514.1| hypothetical protein
           AT4G18540 [Arabidopsis thaliana]
           gi|55740647|gb|AAV63916.1| hypothetical protein
           At4g18540 [Arabidopsis thaliana]
          Length = 303

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
 Frame = +2

Query: 119 VKFSSCRGVAFEIKPHLDPFSIKHTP--KPILEEAQPPSLRFRFPWG---SSSKIVPTSN 283
           V+FSSCRGVAFEIKP+ +PF++  T   + +  E +  S RFR PW    ++SK+VP+S 
Sbjct: 7   VRFSSCRGVAFEIKPNANPFAVVTTDQNRNVNAEREGTSSRFRLPWDFMRNASKVVPSS- 65

Query: 284 MSFRTASRASSHFC 325
               + SRASSHFC
Sbjct: 66  -IEHSMSRASSHFC 78


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