BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009781
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274754.1| PREDICTED: THO complex subunit 3 [Vitis vini...   453   e-125
ref|XP_004149572.1| PREDICTED: THO complex subunit 3-like [Cucum...   452   e-125
ref|XP_004170178.1| PREDICTED: THO complex subunit 3-like [Cucum...   450   e-124
ref|XP_003551358.1| PREDICTED: THO complex subunit 3-like [Glyci...   446   e-123
ref|XP_002300586.1| predicted protein [Populus trichocarpa] gi|1...   444   e-122

>ref|XP_002274754.1| PREDICTED: THO complex subunit 3 [Vitis vinifera]
           gi|147789347|emb|CAN62349.1| hypothetical protein
           VITISV_004943 [Vitis vinifera]
           gi|296089987|emb|CBI39806.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score =  453 bits (1166), Expect = e-125
 Identities = 213/237 (89%), Positives = 232/237 (97%)
 Frame = +1

Query: 229 YSDLIATASGDKTVRLWDARSGKCSQLAELSGENINITYKPDGTHVAVGNRDDELTILDV 408
           ++DLIATASGDKTVRLWDARSGKC+Q AELSGENINITYKPDGTH+AVGNRDDELTILDV
Sbjct: 77  HADLIATASGDKTVRLWDARSGKCTQQAELSGENINITYKPDGTHIAVGNRDDELTILDV 136

Query: 409 RKFKPLHKRKFNYEVNEIAWNMTGDMFFLTTGNGTVEVLDYPSLRAVNTLLAHTAGCYCI 588
           RKFKP+H+RKF+YEVNEIAWNMTG+MFFLTTGNGTVEVL YP+LR ++TL+AHTAGCYCI
Sbjct: 137 RKFKPIHRRKFSYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPALRPLDTLMAHTAGCYCI 196

Query: 589 AIDPLGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFL 768
           AIDP+GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLF+
Sbjct: 197 AIDPIGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFI 256

Query: 769 DISVVNTGRSIHQIPCRAAMNSVEWNPQHNLLAYAGDDKNKYQADEGVFRIYGFEGA 939
           DIS V+TGR++HQIPCRAAMNSVEWNP+HNLLAYAGDDKNKYQADEGVFRI+GFE A
Sbjct: 257 DISNVHTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGVFRIFGFESA 313



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = +2

Query: 2   GHGKVKDIELKGHTDSVDQLCWDPKHSDLIATASGDKTV 118
           GHGKVKDIELKGHTDSVDQLCWDPKH+DLIATASGDKTV
Sbjct: 52  GHGKVKDIELKGHTDSVDQLCWDPKHADLIATASGDKTV 90


>ref|XP_004149572.1| PREDICTED: THO complex subunit 3-like [Cucumis sativus]
          Length = 314

 Score =  452 bits (1163), Expect = e-125
 Identities = 213/235 (90%), Positives = 228/235 (97%)
 Frame = +1

Query: 229 YSDLIATASGDKTVRLWDARSGKCSQLAELSGENINITYKPDGTHVAVGNRDDELTILDV 408
           +SDLIATASGDKTVRLWDAR+GKCSQ AELSGENINITYKPDGTH+AVGNRDDELTILDV
Sbjct: 78  HSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDV 137

Query: 409 RKFKPLHKRKFNYEVNEIAWNMTGDMFFLTTGNGTVEVLDYPSLRAVNTLLAHTAGCYCI 588
           RKFKP+HKRKFNYEVNEIAWNMTG+MFFLTTGNGTVEVL YPSLR + TL+AHTAGCYCI
Sbjct: 138 RKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCI 197

Query: 589 AIDPLGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFL 768
           AIDP+G YFAVGSADSLVSLWDIS+MLCVRTFTKLEWPVRTISFNHTGEYIASASEDLF+
Sbjct: 198 AIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFI 257

Query: 769 DISVVNTGRSIHQIPCRAAMNSVEWNPQHNLLAYAGDDKNKYQADEGVFRIYGFE 933
           DIS V TGR++HQIPCRAAMNSVEWNP+HNLLAYAGDDKNKYQADEG+FRI+GFE
Sbjct: 258 DISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFE 312



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = +2

Query: 2   GHGKVKDIELKGHTDSVDQLCWDPKHSDLIATASGDKTV 118
           GHGKVKD+ELKGHTDSVDQLCWDPKHSDLIATASGDKTV
Sbjct: 53  GHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTV 91


>ref|XP_004170178.1| PREDICTED: THO complex subunit 3-like [Cucumis sativus]
          Length = 314

 Score =  450 bits (1158), Expect = e-124
 Identities = 212/235 (90%), Positives = 227/235 (96%)
 Frame = +1

Query: 229 YSDLIATASGDKTVRLWDARSGKCSQLAELSGENINITYKPDGTHVAVGNRDDELTILDV 408
           +SDLIATASGDKTVRLWDAR+GKCSQ AELSGENINITYKPDGTH+AVGNRDDELTILDV
Sbjct: 78  HSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDV 137

Query: 409 RKFKPLHKRKFNYEVNEIAWNMTGDMFFLTTGNGTVEVLDYPSLRAVNTLLAHTAGCYCI 588
           RKFKP+HKRKFNYEVNEIAWNMTG+MFFLTTGNGTVEVL YPSLR + TL+AHTAGCYCI
Sbjct: 138 RKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCI 197

Query: 589 AIDPLGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFL 768
           AIDP+G YFAVGSADSLVSLWDIS+MLCVRTFTKL WPVRTISFNHTGEYIASASEDLF+
Sbjct: 198 AIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLRWPVRTISFNHTGEYIASASEDLFI 257

Query: 769 DISVVNTGRSIHQIPCRAAMNSVEWNPQHNLLAYAGDDKNKYQADEGVFRIYGFE 933
           DIS V TGR++HQIPCRAAMNSVEWNP+HNLLAYAGDDKNKYQADEG+FRI+GFE
Sbjct: 258 DISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGIFRIFGFE 312



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = +2

Query: 2   GHGKVKDIELKGHTDSVDQLCWDPKHSDLIATASGDKTV 118
           GHGKVKD+ELKGHTDSVDQLCWDPKHSDLIATASGDKTV
Sbjct: 53  GHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTV 91


>ref|XP_003551358.1| PREDICTED: THO complex subunit 3-like [Glycine max]
          Length = 313

 Score =  446 bits (1147), Expect = e-123
 Identities = 210/237 (88%), Positives = 231/237 (97%)
 Frame = +1

Query: 229 YSDLIATASGDKTVRLWDARSGKCSQLAELSGENINITYKPDGTHVAVGNRDDELTILDV 408
           ++DLIATASGDKTVRLWDARSGKCSQ AELSGENINITYKPDGTHVAVGNRDDELTILDV
Sbjct: 77  HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHVAVGNRDDELTILDV 136

Query: 409 RKFKPLHKRKFNYEVNEIAWNMTGDMFFLTTGNGTVEVLDYPSLRAVNTLLAHTAGCYCI 588
           RKFKP+H+RKFNYEVNEIAWNMTG+MFFLTTGNGTVEVL YPSLR ++TL+AHTAGCYCI
Sbjct: 137 RKFKPIHRRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLSYPSLRPLDTLMAHTAGCYCI 196

Query: 589 AIDPLGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFL 768
           AIDP+GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI FN+TG++IASASEDLF+
Sbjct: 197 AIDPVGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTIGFNYTGDFIASASEDLFI 256

Query: 769 DISVVNTGRSIHQIPCRAAMNSVEWNPQHNLLAYAGDDKNKYQADEGVFRIYGFEGA 939
           DIS V+TGR++HQIPCRAAMNSVEWNP++NLLAYAGDDKNK+QADEGVFRI+GF+ A
Sbjct: 257 DISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKHQADEGVFRIFGFKNA 313



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = +2

Query: 2   GHGKVKDIELKGHTDSVDQLCWDPKHSDLIATASGDKTV 118
           GHGKVKDIELKGHTDSVDQLCWDPKH+DLIATASGDKTV
Sbjct: 52  GHGKVKDIELKGHTDSVDQLCWDPKHADLIATASGDKTV 90


>ref|XP_002300586.1| predicted protein [Populus trichocarpa] gi|118482489|gb|ABK93167.1|
           unknown [Populus trichocarpa]
           gi|222847844|gb|EEE85391.1| predicted protein [Populus
           trichocarpa]
          Length = 313

 Score =  444 bits (1141), Expect = e-122
 Identities = 209/237 (88%), Positives = 227/237 (95%)
 Frame = +1

Query: 229 YSDLIATASGDKTVRLWDARSGKCSQLAELSGENINITYKPDGTHVAVGNRDDELTILDV 408
           ++DLIATASGDKTVRLWDARSGKCSQ  ELSGENINITY+PDGTHVAVGNRDDELTILDV
Sbjct: 77  HADLIATASGDKTVRLWDARSGKCSQQTELSGENINITYRPDGTHVAVGNRDDELTILDV 136

Query: 409 RKFKPLHKRKFNYEVNEIAWNMTGDMFFLTTGNGTVEVLDYPSLRAVNTLLAHTAGCYCI 588
           RKFKP+H+RKFNYEVNEIAWNMTG+MF LTTGNGTVEVL YPSL+ + T++AHTAGCYCI
Sbjct: 137 RKFKPIHRRKFNYEVNEIAWNMTGEMFLLTTGNGTVEVLSYPSLQPLETVMAHTAGCYCI 196

Query: 589 AIDPLGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFL 768
           AIDP GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFNHTG++IASASEDLF+
Sbjct: 197 AIDPKGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFNHTGDFIASASEDLFI 256

Query: 769 DISVVNTGRSIHQIPCRAAMNSVEWNPQHNLLAYAGDDKNKYQADEGVFRIYGFEGA 939
           DIS V+TGRS+HQIPCRAAMNSVEWNP++NLLAYAGDDKNKYQ DEGVFRI+GFE A
Sbjct: 257 DISNVHTGRSVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQTDEGVFRIFGFESA 313



 Score = 83.2 bits (204), Expect = 8e-14
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = +2

Query: 2   GHGKVKDIELKGHTDSVDQLCWDPKHSDLIATASGDKTV 118
           GHGK+KDIELKGH DSVDQLCWDPKH+DLIATASGDKTV
Sbjct: 52  GHGKIKDIELKGHADSVDQLCWDPKHADLIATASGDKTV 90