BLASTX nr result

ID: Bupleurum21_contig00009775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009775
         (1128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511796.1| conserved hypothetical protein [Ricinus comm...   277   4e-72
ref|XP_003534593.1| PREDICTED: F-box protein At4g00755 [Glycine ...   269   8e-70
ref|XP_003552361.1| PREDICTED: F-box protein At4g00755-like [Gly...   269   1e-69
gb|AFK39809.1| unknown [Lotus japonicus]                              261   2e-67
ref|XP_002320094.1| f-box family protein [Populus trichocarpa] g...   258   2e-66

>ref|XP_002511796.1| conserved hypothetical protein [Ricinus communis]
            gi|223548976|gb|EEF50465.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 362

 Score =  277 bits (708), Expect = 4e-72
 Identities = 148/289 (51%), Positives = 183/289 (63%)
 Frame = -3

Query: 1123 FVVSNGLWKQLCLRNFPQLANVANVTEPNQVKKSADVGSSTSLQWEALEREHRVYASLFR 944
            FV++NGL KQLCLR FP L +V +VTEP+ +K    +G S S++WE LEREHRV+A L R
Sbjct: 42   FVIANGLCKQLCLRMFPCLHSVDHVTEPDSMKNPLGIGCSKSMEWETLEREHRVFAFLAR 101

Query: 943  AISKVKATNCVSEAFGASSTDRYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 764
              +      C+SEA  ASSTD YP                                    
Sbjct: 102  GCTSFALKECISEAISASSTDNYPGESIHNTLEPRDRIARRASYWSSK------------ 149

Query: 763  XXXXXXXXXXXXXGQKNPDVPETLIYKLKAAICVIAEINIRPFQAHFQPDHPIYSAKYVR 584
                         GQ NP VPETLIYKL A IC+I EI++ PFQA FQP  PIYSA  VR
Sbjct: 150  -------------GQSNPAVPETLIYKLVADICLITEISVHPFQAFFQPGTPIYSANSVR 196

Query: 583  FRMGHPKSPKEINNLELPLEQNADENIIWTYTSPEFSMSQENVLQSFKLPEPVLCIGGFV 404
            FRMGH K+P++ + +  P +  AD+ ++WTYTSPEF+M+QEN LQ F+LPEPVLCIGG +
Sbjct: 197  FRMGHLKAPED-DPMSEPCDNCADD-VVWTYTSPEFAMAQENRLQKFELPEPVLCIGGIL 254

Query: 403  QVEMLGRVQTQEIDERYYICVSHVQIVGRPLFPAFDVDIIEPSGKFSLK 257
            QVE+LGRVQ QE+D  +YICVSHVQ++GRPL PAF  +I+E SGKF LK
Sbjct: 255  QVELLGRVQKQEMDGLFYICVSHVQVLGRPLSPAFTFEILERSGKFVLK 303


>ref|XP_003534593.1| PREDICTED: F-box protein At4g00755 [Glycine max]
          Length = 363

 Score =  269 bits (688), Expect = 8e-70
 Identities = 152/324 (46%), Positives = 192/324 (59%), Gaps = 2/324 (0%)
 Frame = -3

Query: 1123 FVVSNGLWKQLCLRNFPQLANVANVTEPNQ--VKKSADVGSSTSLQWEALEREHRVYASL 950
            FV++NGL KQLCLR FPQL+ VA V E NQ   K+ A+VGSS S++W +L REHRVYA L
Sbjct: 43   FVIANGLCKQLCLRMFPQLSRVAFVVELNQNGAKEHAEVGSSYSMEWLSLLREHRVYAYL 102

Query: 949  FRAISKVKATNCVSEAFGASSTDRYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 770
             RA+    A NC+++  GASSTD +P                                  
Sbjct: 103  GRALMSSVAMNCIAKTVGASSTDNFPQESIDNTLEPRDYINGRYCYWSSD---------- 152

Query: 769  XXXXXXXXXXXXXXXGQKNPDVPETLIYKLKAAICVIAEINIRPFQAHFQPDHPIYSAKY 590
                           GQ NP+VPETL Y+L + ICVI EINI+PFQA FQ   PIYSAK 
Sbjct: 153  ---------------GQSNPNVPETLTYELVSQICVITEINIQPFQADFQRGSPIYSAKS 197

Query: 589  VRFRMGHPKSPKEINNLELPLEQNADENIIWTYTSPEFSMSQENVLQSFKLPEPVLCIGG 410
            VRF+MGHPK+  ++ +         DE  +WTY SPEF MSQEN LQ FKLPEPVLCIGG
Sbjct: 198  VRFKMGHPKASLDVAD---------DEMFVWTYNSPEFPMSQENRLQKFKLPEPVLCIGG 248

Query: 409  FVQVEMLGRVQTQEIDERYYICVSHVQIVGRPLFPAFDVDIIEPSGKFSLKHYPEALSKT 230
             +Q+E+LGRVQ QE+D   YICVSHVQ++G  L P F+VDI++PSG F LK    A  ++
Sbjct: 249  ILQIELLGRVQRQEMDGLLYICVSHVQVLGSSLSPPFNVDILQPSGMFVLKRDQLANHQS 308

Query: 229  MSSVSDXXXXXXXXXPEERVWEHL 158
            + +  +          E R ++H+
Sbjct: 309  VVTSGNESQEILAEQRELRDYQHI 332


>ref|XP_003552361.1| PREDICTED: F-box protein At4g00755-like [Glycine max]
          Length = 364

 Score =  269 bits (687), Expect = 1e-69
 Identities = 148/292 (50%), Positives = 181/292 (61%), Gaps = 2/292 (0%)
 Frame = -3

Query: 1126 DFVVSNGLWKQLCLRNFPQLANVANVTEPNQ--VKKSADVGSSTSLQWEALEREHRVYAS 953
            D V++NGL KQLCLR FPQL+ VA V E NQ   K+ A+VGSS S++W +L REHRV+A 
Sbjct: 42   DIVIANGLCKQLCLRMFPQLSRVAFVVELNQNGAKEHAEVGSSYSMEWLSLLREHRVFAY 101

Query: 952  LFRAISKVKATNCVSEAFGASSTDRYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 773
            L RA+    A NC+++  GASSTD +P                                 
Sbjct: 102  LGRALMSSVAMNCIAKTVGASSTDNFPQESIDNTLEPRDHINGRYYYWSSN--------- 152

Query: 772  XXXXXXXXXXXXXXXXGQKNPDVPETLIYKLKAAICVIAEINIRPFQAHFQPDHPIYSAK 593
                            GQ NP+VPETL Y+L + ICVI EINI+PFQA FQ   PIYSAK
Sbjct: 153  ----------------GQSNPNVPETLTYELVSPICVITEINIQPFQADFQIGSPIYSAK 196

Query: 592  YVRFRMGHPKSPKEINNLELPLEQNADENIIWTYTSPEFSMSQENVLQSFKLPEPVLCIG 413
             VRF+MGHPK+          L+   DE  +WTYTSPEF MS+EN LQ FKLPEPVLCIG
Sbjct: 197  SVRFKMGHPKAS---------LDATDDEMFVWTYTSPEFPMSKENRLQKFKLPEPVLCIG 247

Query: 412  GFVQVEMLGRVQTQEIDERYYICVSHVQIVGRPLFPAFDVDIIEPSGKFSLK 257
            GF+Q+E+LGR+Q QE+D   YICVSHVQ++G  L P F+VDI++PSG F LK
Sbjct: 248  GFLQIELLGRIQRQEMDGLLYICVSHVQVLGGSLSPPFNVDILQPSGMFVLK 299


>gb|AFK39809.1| unknown [Lotus japonicus]
          Length = 366

 Score =  261 bits (668), Expect = 2e-67
 Identities = 146/309 (47%), Positives = 186/309 (60%), Gaps = 6/309 (1%)
 Frame = -3

Query: 1123 FVVSNGLWKQLCLRNFPQLANVANVTEPNQ--VKKSADVGSSTSLQWEALEREHRVYASL 950
            +V+ N L KQLCLR FPQL+ V  V E NQ  ++++ +VGSS+S++W AL+R+HRVYA L
Sbjct: 45   YVIVNSLCKQLCLRIFPQLSRVTRVVETNQHGLEETPEVGSSSSMEWLALQRDHRVYAYL 104

Query: 949  FRAISKVKATNCVSEAFGASSTDRYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 770
             R+     + NC+++   ASSTD +P                                  
Sbjct: 105  ARSFKSSVSMNCIAKTIVASSTDNFPQESIDNTLEPSDHIAGRYSYWSSN---------- 154

Query: 769  XXXXXXXXXXXXXXXGQKNPDVPETLIYKLKAAICVIAEINIRPFQAHFQPDHPIYSAKY 590
                           GQ NP+VPETL Y+L + ICV+ EINI+PFQA+FQ   PIYSAK 
Sbjct: 155  ---------------GQSNPNVPETLTYELASQICVVTEINIQPFQAYFQMGGPIYSAKS 199

Query: 589  VRFRMGHPKSPKEINNLELPLEQNADENIIWTYTSPEFSMSQENVLQSFKLPEPVLCIGG 410
            VRF+MGH         +   L+ +ADE I+WTYTSPEF M+QEN LQ+ KLPEPVLCIGG
Sbjct: 200  VRFKMGH---------INASLDASADEKIVWTYTSPEFPMTQENELQNSKLPEPVLCIGG 250

Query: 409  FVQVEMLGRVQTQEIDERYYICVSHVQIVGRPLFPAFDVDIIEPSGKFSLK----HYPEA 242
             +QVE+LGRVQ QE+D   YIC+SHVQ VG  L PAF VDI+EPSG F LK    + P A
Sbjct: 251  ILQVELLGRVQRQEMDGLLYICISHVQAVGSLLSPAFSVDILEPSGMFVLKCDRNYQPPA 310

Query: 241  LSKTMSSVS 215
             S+  S  +
Sbjct: 311  TSEEESGAN 319


>ref|XP_002320094.1| f-box family protein [Populus trichocarpa]
            gi|222860867|gb|EEE98409.1| f-box family protein [Populus
            trichocarpa]
          Length = 374

 Score =  258 bits (658), Expect = 2e-66
 Identities = 140/291 (48%), Positives = 178/291 (61%), Gaps = 1/291 (0%)
 Frame = -3

Query: 1126 DFVVSNGLWKQLCLRNFPQLANVANVTEPNQV-KKSADVGSSTSLQWEALEREHRVYASL 950
            DFV++NGL KQLCL  FP L  V  V EP+ V +K+++VG S  ++WE L+REH+ YA L
Sbjct: 45   DFVIANGLCKQLCLSMFPHLLRVDCVIEPSCVMEKASEVGCSKFVEWETLKREHKAYAFL 104

Query: 949  FRAISKVKATNCVSEAFGASSTDRYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 770
             +A       +C+ +A  ASSTD YP                                  
Sbjct: 105  AQACLSFPFDDCIKDAISASSTDNYPEESIRNTLQKGDRVGRRPSYWSSK---------- 154

Query: 769  XXXXXXXXXXXXXXXGQKNPDVPETLIYKLKAAICVIAEINIRPFQAHFQPDHPIYSAKY 590
                           GQ+   VPETL+YKL A ICVI EINI+PFQA+FQ   PIYSA+ 
Sbjct: 155  ---------------GQRKAAVPETLVYKLVADICVITEINIQPFQAYFQQGSPIYSAES 199

Query: 589  VRFRMGHPKSPKEINNLELPLEQNADENIIWTYTSPEFSMSQENVLQSFKLPEPVLCIGG 410
            VRF +GHPK P + + L  PL+  AD+  IWTY+SPEF M+QE  LQ+FKLPEPV+CIGG
Sbjct: 200  VRFHLGHPKCPMD-DTLGEPLDNCADDKFIWTYSSPEFPMAQERSLQNFKLPEPVVCIGG 258

Query: 409  FVQVEMLGRVQTQEIDERYYICVSHVQIVGRPLFPAFDVDIIEPSGKFSLK 257
             +Q+E+L RVQ QE+D  +YICV+HVQ+ GRPL  AF V+I+ PSGKF LK
Sbjct: 259  ILQIELLRRVQRQEMDGLFYICVAHVQVKGRPLSSAFGVEILGPSGKFVLK 309


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