BLASTX nr result

ID: Bupleurum21_contig00009772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009772
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicoti...    64   1e-19
ref|XP_002300496.1| microtubule organization protein [Populus tr...    60   2e-18
ref|XP_003535517.1| PREDICTED: protein MOR1-like [Glycine max]         60   5e-18
ref|XP_002317062.1| microtubule organization protein [Populus tr...    58   3e-17
ref|XP_002534264.1| microtubule associated protein xmap215, puta...    64   4e-17

>dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicotiana tabacum]
          Length = 2029

 Score = 63.5 bits (153), Expect(2) = 1e-19
 Identities = 30/48 (62%), Positives = 36/48 (75%)
 Frame = +1

Query: 340  IKRFWRCIQLLKPVAAAVTDKSEDVRKAAEVCFDEILKVCGHEMKHMN 483
            +K F   + LLKPVA+A+TDKS DVRKAAE CF E+L+VCG EM   N
Sbjct: 1005 MKEFPDAVHLLKPVASAMTDKSADVRKAAEACFGELLRVCGQEMVSKN 1052



 Score = 60.1 bits (144), Expect(2) = 1e-19
 Identities = 28/45 (62%), Positives = 32/45 (71%)
 Frame = +2

Query: 227  AVDKASKVPYFAAALMDAKFGAEGRRDLFEWLSRQLAGSKDFGDA 361
            AV     VPY   AL DAK GAEGR+DLF+WLS+QL G K+F DA
Sbjct: 967  AVHLDKMVPYITGALTDAKLGAEGRKDLFDWLSKQLTGMKEFPDA 1011


>ref|XP_002300496.1| microtubule organization protein [Populus trichocarpa]
            gi|222847754|gb|EEE85301.1| microtubule organization
            protein [Populus trichocarpa]
          Length = 2036

 Score = 60.5 bits (145), Expect(2) = 2e-18
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = +2

Query: 227  AVDKASKVPYFAAALMDAKFGAEGRRDLFEWLSRQLAGSKDFGDA 361
            AV     VPY  AAL++ K GAEGR+DLF+WLS+QL+GS +F DA
Sbjct: 974  AVHLDKMVPYITAALIETKLGAEGRKDLFDWLSKQLSGSSEFSDA 1018



 Score = 58.5 bits (140), Expect(2) = 2e-18
 Identities = 28/45 (62%), Positives = 32/45 (71%)
 Frame = +1

Query: 349  FWRCIQLLKPVAAAVTDKSEDVRKAAEVCFDEILKVCGHEMKHMN 483
            F   I LLKP ++A+TDKS DVRKAAE C  EIL+VCG EM   N
Sbjct: 1015 FSDAIHLLKPASSAMTDKSSDVRKAAEACISEILRVCGQEMIEKN 1059


>ref|XP_003535517.1| PREDICTED: protein MOR1-like [Glycine max]
          Length = 2035

 Score = 60.5 bits (145), Expect(2) = 5e-18
 Identities = 29/50 (58%), Positives = 34/50 (68%)
 Frame = +2

Query: 212  DVMPPAVDKASKVPYFAAALMDAKFGAEGRRDLFEWLSRQLAGSKDFGDA 361
            D    AV     VPY A ALMD+K GAEGR+DLF+WLSRQL+G   F +A
Sbjct: 969  DAWLAAVHLDKMVPYIAIALMDSKLGAEGRKDLFDWLSRQLSGLSSFAEA 1018



 Score = 57.4 bits (137), Expect(2) = 5e-18
 Identities = 26/44 (59%), Positives = 33/44 (75%)
 Frame = +1

Query: 340  IKRFWRCIQLLKPVAAAVTDKSEDVRKAAEVCFDEILKVCGHEM 471
            +  F    QLLKP ++A+TDKS DVRKA+E C +EIL+V GHEM
Sbjct: 1012 LSSFAEAAQLLKPASSAMTDKSSDVRKASEACINEILRVSGHEM 1055


>ref|XP_002317062.1| microtubule organization protein [Populus trichocarpa]
            gi|222860127|gb|EEE97674.1| microtubule organization
            protein [Populus trichocarpa]
          Length = 2025

 Score = 58.2 bits (139), Expect(2) = 3e-17
 Identities = 28/48 (58%), Positives = 32/48 (66%)
 Frame = +1

Query: 340  IKRFWRCIQLLKPVAAAVTDKSEDVRKAAEVCFDEILKVCGHEMKHMN 483
            +  F   I LLKP  +A+TDKS DVRKAAE C  EIL+VCG EM   N
Sbjct: 1009 LSEFPDAIHLLKPAGSAMTDKSADVRKAAEACISEILRVCGQEMIERN 1056



 Score = 57.0 bits (136), Expect(2) = 3e-17
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = +2

Query: 227  AVDKASKVPYFAAALMDAKFGAEGRRDLFEWLSRQLAGSKDFGDA 361
            AV     +PY  AAL ++K GAEGR+DLF+WLS+QL+G  +F DA
Sbjct: 971  AVHLDKMIPYITAALFESKLGAEGRKDLFDWLSKQLSGLSEFPDA 1015


>ref|XP_002534264.1| microtubule associated protein xmap215, putative [Ricinus communis]
            gi|223525620|gb|EEF28119.1| microtubule associated
            protein xmap215, putative [Ricinus communis]
          Length = 1992

 Score = 63.5 bits (153), Expect(2) = 4e-17
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = +2

Query: 227  AVDKASKVPYFAAALMDAKFGAEGRRDLFEWLSRQLAGSKDFGDA 361
            AV     +PY A AL+DAK GAEGR+DLF+WLSRQL+G  DF DA
Sbjct: 934  AVHLDKMIPYIATALIDAKLGAEGRKDLFDWLSRQLSGLSDFSDA 978



 Score = 51.2 bits (121), Expect(2) = 4e-17
 Identities = 24/45 (53%), Positives = 29/45 (64%)
 Frame = +1

Query: 349  FWRCIQLLKPVAAAVTDKSEDVRKAAEVCFDEILKVCGHEMKHMN 483
            F   + LLKP  +A+TDKS DVRKAAE C  E+L+V G E    N
Sbjct: 975  FSDAVHLLKPAGSAMTDKSSDVRKAAEACITEVLRVSGQETVEKN 1019


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