BLASTX nr result

ID: Bupleurum21_contig00009749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009749
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628618.1| Pyruvate dehydrogenase E1 component alpha su...    83   1e-17
gb|ACJ11743.1| pyruvate dehydrogenase alpha subunit [Gossypium h...    75   1e-16
ref|XP_002314631.1| predicted protein [Populus trichocarpa] gi|2...    78   4e-16
ref|NP_173828.1| pyruvate dehydrogenase E1 component subunit alp...    75   5e-16
ref|XP_002893330.1| IAA-conjugate-resistant 4 [Arabidopsis lyrat...    75   5e-16

>ref|XP_003628618.1| Pyruvate dehydrogenase E1 component alpha subunit [Medicago
           truncatula] gi|355522640|gb|AET03094.1| Pyruvate
           dehydrogenase E1 component alpha subunit [Medicago
           truncatula]
          Length = 395

 Score = 83.2 bits (204), Expect(2) = 1e-17
 Identities = 40/48 (83%), Positives = 44/48 (91%)
 Frame = -2

Query: 146 FTSHNCEPPSLSVETSASELMSFFIDMSTMRRMEIAADSLYKSKLIRG 3
           FTSHNCEPPS +V+T+ASELMSFF DM  MRRMEIAADSLYK+KLIRG
Sbjct: 46  FTSHNCEPPSTTVQTTASELMSFFNDMVLMRRMEIAADSLYKAKLIRG 93



 Score = 31.6 bits (70), Expect(2) = 1e-17
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -1

Query: 336 LMKPRFAASAVSLRRLYSSDTTPITVETSM 247
           L+KP F +SA+  R + SS T  +TVETS+
Sbjct: 15  LLKPYFLSSAIRHRSISSSSTETLTVETSI 44


>gb|ACJ11743.1| pyruvate dehydrogenase alpha subunit [Gossypium hirsutum]
          Length = 394

 Score = 75.1 bits (183), Expect(2) = 1e-16
 Identities = 36/48 (75%), Positives = 41/48 (85%)
 Frame = -2

Query: 146 FTSHNCEPPSLSVETSASELMSFFIDMSTMRRMEIAADSLYKSKLIRG 3
           FTSH CE PS SVET+  EL++FF DM+ MRRMEIAADSLYK+KLIRG
Sbjct: 45  FTSHQCEAPSRSVETNPKELLTFFRDMALMRRMEIAADSLYKAKLIRG 92



 Score = 35.8 bits (81), Expect(2) = 1e-16
 Identities = 20/38 (52%), Positives = 27/38 (71%)
 Frame = -1

Query: 360 ALVRRSFNLMKPRFAASAVSLRRLYSSDTTPITVETSM 247
           A   RS +L+KP   +SA+SLRR  S D +P+TVETS+
Sbjct: 8   ASASRSSSLLKP--LSSALSLRRPISGDNSPLTVETSV 43


>ref|XP_002314631.1| predicted protein [Populus trichocarpa] gi|222863671|gb|EEF00802.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 78.2 bits (191), Expect(2) = 4e-16
 Identities = 36/48 (75%), Positives = 43/48 (89%)
 Frame = -2

Query: 146 FTSHNCEPPSLSVETSASELMSFFIDMSTMRRMEIAADSLYKSKLIRG 3
           FT+H C+PPS +V+TS  EL+SFF DM+TMRRMEIAADSLYK+KLIRG
Sbjct: 44  FTTHRCDPPSRTVDTSPQELLSFFRDMATMRRMEIAADSLYKAKLIRG 91



 Score = 31.2 bits (69), Expect(2) = 4e-16
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = -1

Query: 339 NLMKPRFAASAVSLRRLYSSDTTPITVETSM 247
           N +KP   A+A SLRR  S+ T P+T+ETS+
Sbjct: 14  NFLKP--LATAFSLRRPISTSTDPLTIETSI 42


>ref|NP_173828.1| pyruvate dehydrogenase E1 component subunit alpha-2 [Arabidopsis
           thaliana] gi|118573089|sp|Q8H1Y0.2|ODPA2_ARATH RecName:
           Full=Pyruvate dehydrogenase E1 component subunit
           alpha-2, mitochondrial; Short=PDHE1-A; Flags: Precursor
           gi|13430606|gb|AAK25925.1|AF360215_1 putative pyruvate
           dehydrogenase E1 alpha subunit [Arabidopsis thaliana]
           gi|2829869|gb|AAC00577.1| pyruvate dehydrogenase E1
           alpha subunit [Arabidopsis thaliana]
           gi|15293169|gb|AAK93695.1| putative pyruvate
           dehydrogenase E1 alpha subunit [Arabidopsis thaliana]
           gi|21593680|gb|AAM65647.1| pyruvate dehydrogenase E1
           alpha subunit [Arabidopsis thaliana]
           gi|332192371|gb|AEE30492.1| pyruvate dehydrogenase E1
           component subunit alpha-2 [Arabidopsis thaliana]
          Length = 393

 Score = 75.1 bits (183), Expect(2) = 5e-16
 Identities = 36/48 (75%), Positives = 42/48 (87%)
 Frame = -2

Query: 146 FTSHNCEPPSLSVETSASELMSFFIDMSTMRRMEIAADSLYKSKLIRG 3
           FTSH CE PS SVETS+ E+++FF DM+ MRRMEIAADSLYK+KLIRG
Sbjct: 44  FTSHLCESPSRSVETSSEEILAFFRDMARMRRMEIAADSLYKAKLIRG 91



 Score = 33.9 bits (76), Expect(2) = 5e-16
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
 Frame = -1

Query: 363 MALVR---RSFNLMKPRFAASAVSLRRLYSSDTTPITVETSM 247
           MAL R   RS   +KP   A   S+RR  S+D++PIT+ET++
Sbjct: 1   MALSRLSSRSNTFLKPAITALPSSIRRHVSTDSSPITIETAV 42


>ref|XP_002893330.1| IAA-conjugate-resistant 4 [Arabidopsis lyrata subsp. lyrata]
           gi|297339172|gb|EFH69589.1| IAA-conjugate-resistant 4
           [Arabidopsis lyrata subsp. lyrata]
          Length = 393

 Score = 75.1 bits (183), Expect(2) = 5e-16
 Identities = 36/48 (75%), Positives = 42/48 (87%)
 Frame = -2

Query: 146 FTSHNCEPPSLSVETSASELMSFFIDMSTMRRMEIAADSLYKSKLIRG 3
           FTSH CE PS SVETS+ E+++FF DM+ MRRMEIAADSLYK+KLIRG
Sbjct: 44  FTSHLCESPSRSVETSSEEILAFFRDMARMRRMEIAADSLYKAKLIRG 91



 Score = 33.9 bits (76), Expect(2) = 5e-16
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
 Frame = -1

Query: 363 MALVR---RSFNLMKPRFAASAVSLRRLYSSDTTPITVETSM 247
           MAL R   RS   +KP   A   S+RR  S+D++PIT+ET++
Sbjct: 1   MALSRLSSRSNTFLKPAITALPSSIRRHVSTDSSPITIETAV 42


Top