BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009742
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot...   276   3e-72
ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...   276   3e-72
gb|ABK95931.1| unknown [Populus trichocarpa]                          274   1e-71
ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|2...   268   1e-69
gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanu...   263   3e-68

>ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
           [Vitis vinifera]
          Length = 420

 Score =  276 bits (706), Expect = 3e-72
 Identities = 144/226 (63%), Positives = 163/226 (72%), Gaps = 3/226 (1%)
 Frame = -1

Query: 702 TNPYLPVNSTAIEGFVQPVVGPDGKKKEPESNVLLASIENRIYDVTVEVLNTVFSAFGMV 523
           TNPYLPVN TAIEG  QP +GPDGKKKEPESNVLLASIEN  Y VTV+VL+TVFSAFG V
Sbjct: 183 TNPYLPVNPTAIEGIAQPALGPDGKKKEPESNVLLASIENMQYAVTVDVLHTVFSAFGTV 242

Query: 522 QKIAIFEKNGTTQALIQYPDISTAAAAKDALEGHCIYDGGYCKLHISYSRHTDLNVKAYS 343
           QKIAIFEKNG  QALIQYPD++TAA AK+ALEGHCIYDGGYCKLH+SYSRHTDLNVKA+S
Sbjct: 243 QKIAIFEKNGGMQALIQYPDVTTAAVAKEALEGHCIYDGGYCKLHLSYSRHTDLNVKAHS 302

Query: 342 DKSRDYTVSES---XXXXXXXXXXXATVWQNPQAAPGFTGSEVAGVNSFXXXXXXXXXXX 172
           D+SRDYT+ +S               TVWQNPQAAP +TG + A   +            
Sbjct: 303 DRSRDYTIPDSGLLAVQQAPGHPGATTVWQNPQAAPLYTGHDAAAAAA-----------V 351

Query: 171 XXPSWDPAMQHGRPSFVSGSNPLPGQTYGPPSVQAYTTMAPPGSSP 34
             PSWDP MQ GR +F S ++  P Q +   S+ AY   APPGSSP
Sbjct: 352 QVPSWDPNMQAGRSTFASAASAFPSQPFASSSISAYP--APPGSSP 395



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
 Frame = -1

Query: 483 ALIQYPDISTAAAAKDALEGHCI------YDGGYCKLHISYSRHTDLNVKAYSDKSRDYT 322
           ALIQ+ D  TA++A++AL+G  I         G C L ISYS HTDLN+K  S +SRDYT
Sbjct: 124 ALIQFTDAETASSARNALDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYT 183


>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
           [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
           protein product [Vitis vinifera]
          Length = 449

 Score =  276 bits (706), Expect = 3e-72
 Identities = 144/226 (63%), Positives = 163/226 (72%), Gaps = 3/226 (1%)
 Frame = -1

Query: 702 TNPYLPVNSTAIEGFVQPVVGPDGKKKEPESNVLLASIENRIYDVTVEVLNTVFSAFGMV 523
           TNPYLPVN TAIEG  QP +GPDGKKKEPESNVLLASIEN  Y VTV+VL+TVFSAFG V
Sbjct: 212 TNPYLPVNPTAIEGIAQPALGPDGKKKEPESNVLLASIENMQYAVTVDVLHTVFSAFGTV 271

Query: 522 QKIAIFEKNGTTQALIQYPDISTAAAAKDALEGHCIYDGGYCKLHISYSRHTDLNVKAYS 343
           QKIAIFEKNG  QALIQYPD++TAA AK+ALEGHCIYDGGYCKLH+SYSRHTDLNVKA+S
Sbjct: 272 QKIAIFEKNGGMQALIQYPDVTTAAVAKEALEGHCIYDGGYCKLHLSYSRHTDLNVKAHS 331

Query: 342 DKSRDYTVSES---XXXXXXXXXXXATVWQNPQAAPGFTGSEVAGVNSFXXXXXXXXXXX 172
           D+SRDYT+ +S               TVWQNPQAAP +TG + A   +            
Sbjct: 332 DRSRDYTIPDSGLLAVQQAPGHPGATTVWQNPQAAPLYTGHDAAAAAA-----------V 380

Query: 171 XXPSWDPAMQHGRPSFVSGSNPLPGQTYGPPSVQAYTTMAPPGSSP 34
             PSWDP MQ GR +F S ++  P Q +   S+ AY   APPGSSP
Sbjct: 381 QVPSWDPNMQAGRSTFASAASAFPSQPFASSSISAYP--APPGSSP 424



 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 54/103 (52%), Positives = 68/103 (66%), Gaps = 7/103 (6%)
 Frame = -1

Query: 609 NVLLASIEN-RIYDVTVEVLNTVFSAFGMVQKIAIFEKNGTTQALIQYPDISTAAAAKDA 433
           NVLL +IE     DV+++V++ VFSAFG V KIA FEK    QALIQ+ D  TA++A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 169

Query: 432 LEGHCI------YDGGYCKLHISYSRHTDLNVKAYSDKSRDYT 322
           L+G  I         G C L ISYS HTDLN+K  S +SRDYT
Sbjct: 170 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYT 212


>gb|ABK95931.1| unknown [Populus trichocarpa]
          Length = 473

 Score =  274 bits (700), Expect = 1e-71
 Identities = 145/236 (61%), Positives = 164/236 (69%), Gaps = 3/236 (1%)
 Frame = -1

Query: 702 TNPYLPVNSTAIEGFVQPVVGPDGKKKEPESNVLLASIENRIYDVTVEVLNTVFSAFGMV 523
           TNPYLPVN TAIEG VQP VG DGKKKEPESNVLLASIEN  Y VT++VL+TVFSAFG V
Sbjct: 212 TNPYLPVNPTAIEGPVQPTVGADGKKKEPESNVLLASIENMQYAVTIDVLHTVFSAFGTV 271

Query: 522 QKIAIFEKNGTTQALIQYPDISTAAAAKDALEGHCIYDGGYCKLHISYSRHTDLNVKAYS 343
           QKIAIFEKNG TQALIQYPD++TAA AK+ LEGHCIYDGGYCKLH+SYSRHTDLNVKAYS
Sbjct: 272 QKIAIFEKNGGTQALIQYPDVATAAVAKETLEGHCIYDGGYCKLHLSYSRHTDLNVKAYS 331

Query: 342 DKSRDYTVSES--XXXXXXXXXXXATVWQNPQAAPGFTGSEVAGVNSFXXXXXXXXXXXX 169
           DKSRDYT+ ++              T+WQNPQA   +TG+  A   +             
Sbjct: 332 DKSRDYTIPDASLIAAQAPGLHTAPTMWQNPQAGSMYTGNNYATTAA----VPVQVPPGQ 387

Query: 168 XPSWDPAMQHGRPSFVSGSNPLPGQTYGPPSVQAYTTMA-PPGSSPHGHNTQINPS 4
            P+WDP MQ G   + S     PGQTY  P   AY T A P GSSP  H++ I+ S
Sbjct: 388 VPAWDPTMQAGGQGYASVPGTYPGQTYPTPPASAYATAAIPAGSSPRSHSSPISHS 443



 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 7/103 (6%)
 Frame = -1

Query: 609 NVLLASIEN-RIYDVTVEVLNTVFSAFGMVQKIAIFEKNGTTQALIQYPDISTAAAAKDA 433
           NVLL +IE     DV+++V++ VFSAFG + KIA FEK    QALIQ+ D  TA++A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGYLHKIATFEKAAGFQALIQFTDSETASSARNA 169

Query: 432 LEGHCI------YDGGYCKLHISYSRHTDLNVKAYSDKSRDYT 322
           L+G  I         G C L ISYS HTDLN+K  S +SRDYT
Sbjct: 170 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYT 212


>ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|222867070|gb|EEF04201.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  268 bits (684), Expect = 1e-69
 Identities = 140/234 (59%), Positives = 162/234 (69%), Gaps = 2/234 (0%)
 Frame = -1

Query: 702 TNPYLPVNSTAIEGFVQPVVGPDGKKKEPESNVLLASIENRIYDVTVEVLNTVFSAFGMV 523
           TNPYLPVN TAI+G VQ  VG DGKKKEPESNVLLASIEN  Y VTV+VL+TVFS FG V
Sbjct: 216 TNPYLPVNPTAIDGPVQSTVGADGKKKEPESNVLLASIENMQYAVTVDVLHTVFSGFGTV 275

Query: 522 QKIAIFEKNGTTQALIQYPDISTAAAAKDALEGHCIYDGGYCKLHISYSRHTDLNVKAYS 343
           QKIAIFEKNG TQALIQYPD++TAA AK+ LEGHCIYDGGYCKLH+SYSRHTDLNVKA+S
Sbjct: 276 QKIAIFEKNGGTQALIQYPDVATAAVAKETLEGHCIYDGGYCKLHLSYSRHTDLNVKAFS 335

Query: 342 DKSRDYTVSES--XXXXXXXXXXXATVWQNPQAAPGFTGSEVAGVNSFXXXXXXXXXXXX 169
           DKSRDYT+ ++              T WQNPQA   + GS  A   +             
Sbjct: 336 DKSRDYTIPDASFLTAQAPGLHTAPTTWQNPQAGSMYLGSNYATTAA----APAQVPPGQ 391

Query: 168 XPSWDPAMQHGRPSFVSGSNPLPGQTYGPPSVQAYTTMAPPGSSPHGHNTQINP 7
             +WDP+MQ G P + S     PGQTY  P   A + + PPGSSPH +++ I+P
Sbjct: 392 VAAWDPSMQAGGPGYSSVRGMYPGQTYPTPPAYASSAL-PPGSSPHSYSSPISP 444



 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 54/107 (50%), Positives = 68/107 (63%), Gaps = 11/107 (10%)
 Frame = -1

Query: 609 NVLLASIEN-RIYDVTVEVLNTVFSAFGMVQKIAIFEKNGTTQALIQYPDISTAAAAKDA 433
           NVLL +IE     DV+++V++ VFSAFG V KIA FEK    QALIQ+ D  TA++A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGYVHKIATFEKAAGFQALIQFTDAETASSARNA 169

Query: 432 LEGHCIY----------DGGYCKLHISYSRHTDLNVKAYSDKSRDYT 322
           L+G  I             G C L ISYS HTDLN+K  S +SRDYT
Sbjct: 170 LDGRNIMFKKFRYLLPEHVGSCNLRISYSAHTDLNIKFQSHRSRDYT 216


>gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanum tuberosum]
          Length = 442

 Score =  263 bits (672), Expect = 3e-68
 Identities = 138/225 (61%), Positives = 157/225 (69%), Gaps = 3/225 (1%)
 Frame = -1

Query: 702 TNPYLPVNSTAIEGFVQPVVGPDGKKKEPESNVLLASIENRIYDVTVEVLNTVFSAFGMV 523
           TNPYLPVN TA+EG +QPVVGPDGKKKEPESNVL AS+EN  Y VTV+VLNTVFSAFG V
Sbjct: 212 TNPYLPVNPTAMEGVLQPVVGPDGKKKEPESNVLFASLENMQYAVTVDVLNTVFSAFGTV 271

Query: 522 QKIAIFEKNGTTQALIQYPDISTAAAAKDALEGHCIYDGGYCKLHISYSRHTDLNVKAYS 343
           QKIAIFEKNG TQALIQYPD++ AAAAKDALEGHCIYDGGYCKLH+SYSRHTDLNV+AYS
Sbjct: 272 QKIAIFEKNGQTQALIQYPDVTIAAAAKDALEGHCIYDGGYCKLHLSYSRHTDLNVQAYS 331

Query: 342 DKSRDYTVSESXXXXXXXXXXXAT---VWQNPQAAPGFTGSEVAGVNSFXXXXXXXXXXX 172
           DKSRDYTV ES                VW NPQ+ P  + +  A   +            
Sbjct: 332 DKSRDYTVPESSLLAMQQASAVHATPPVWHNPQSGPVQSSAGYATTGT--------VPGQ 383

Query: 171 XXPSWDPAMQHGRPSFVSGSNPLPGQTYGPPSVQAYTTMAPPGSS 37
             P+W+P +Q G  +F S     PG +Y PP+    T + PPGSS
Sbjct: 384 APPAWNPNLQGGGSTFPSAPTGYPGHSYAPPAPAYATAVHPPGSS 428



 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 55/103 (53%), Positives = 70/103 (67%), Gaps = 7/103 (6%)
 Frame = -1

Query: 609 NVLLASIEN-RIYDVTVEVLNTVFSAFGMVQKIAIFEKNGTTQALIQYPDISTAAAAKDA 433
           NVLL +IE     DV+++V++ VFSAFG VQKIA FEK    QALIQ+ D+ TA+AA++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREA 169

Query: 432 LEGHCI------YDGGYCKLHISYSRHTDLNVKAYSDKSRDYT 322
           L+G  I          +C L ISYS HTDLN+K  S +SRDYT
Sbjct: 170 LDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRDYT 212