BLASTX nr result

ID: Bupleurum21_contig00009738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009738
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281160.2| PREDICTED: thioredoxin-related transmembrane...   320   5e-85
emb|CBI20839.3| unnamed protein product [Vitis vinifera]              320   5e-85
ref|XP_002516513.1| conserved hypothetical protein [Ricinus comm...   300   5e-79
ref|XP_002309539.1| predicted protein [Populus trichocarpa] gi|1...   287   3e-75
ref|XP_003550119.1| PREDICTED: thioredoxin-related transmembrane...   279   7e-73

>ref|XP_002281160.2| PREDICTED: thioredoxin-related transmembrane protein 2 [Vitis
           vinifera]
          Length = 262

 Score =  320 bits (819), Expect = 5e-85
 Identities = 157/252 (62%), Positives = 189/252 (75%), Gaps = 1/252 (0%)
 Frame = -1

Query: 923 SPPKMLNLMVSEPYFLFHFLVFFSYIPIRLSASNVFSPHFSFHLLHREIQGLLAFCTLAA 744
           +P   LNL+VSEPY+LFHFL FFSY  +R SAS V SPH    L HREIQ +LAF  LA 
Sbjct: 11  NPLTWLNLLVSEPYYLFHFLAFFSYFVVRSSASQVLSPHILHRLFHREIQAILAFSVLAV 70

Query: 743 IKMVKVETWEAYIADTMFYAEVFLVAIALVLDYHLAIWYMLAFLVIYIFTQQPPYLSLGX 564
           IK+VK ETWE +I+DT+F+A+VFLVAI+L++DYHLA+WY++ F VI+I  QQP Y  LG 
Sbjct: 71  IKVVKEETWEGFISDTLFFAKVFLVAISLIMDYHLALWYIVVFSVIFILAQQPAYEGLGT 130

Query: 563 XXXXXXXXXXXXXXEGRTSKYWLVEFRVLSSSNCIRTSRIFPELSITFSNKNLSFGTVDI 384
                         EG TS++WLVEFR L S  CIRTS  FP+LSIT+SNKNLSFG VD+
Sbjct: 131 SKKLTPLQLEALLTEGNTSRFWLVEFRALCSPTCIRTSLFFPDLSITYSNKNLSFGIVDL 190

Query: 383 GLFPNAAQKFGIPLGNS-KQLPTYILFENAEDVARFPLLNMETKASIPVVTKKLLCRHFE 207
           GLFPN A+KFGI +G S  QLPTYILFENA +V RFP L+ E KAS P +TKKLLCRHFE
Sbjct: 191 GLFPNVAEKFGISVGGSMAQLPTYILFENAVEVTRFPELDFEAKASHPPITKKLLCRHFE 250

Query: 206 LDKRLLDYVNGK 171
           LD+RLL+Y+ G+
Sbjct: 251 LDRRLLEYIKGR 262


>emb|CBI20839.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  320 bits (819), Expect = 5e-85
 Identities = 157/252 (62%), Positives = 189/252 (75%), Gaps = 1/252 (0%)
 Frame = -1

Query: 923 SPPKMLNLMVSEPYFLFHFLVFFSYIPIRLSASNVFSPHFSFHLLHREIQGLLAFCTLAA 744
           +P   LNL+VSEPY+LFHFL FFSY  +R SAS V SPH    L HREIQ +LAF  LA 
Sbjct: 6   NPLTWLNLLVSEPYYLFHFLAFFSYFVVRSSASQVLSPHILHRLFHREIQAILAFSVLAV 65

Query: 743 IKMVKVETWEAYIADTMFYAEVFLVAIALVLDYHLAIWYMLAFLVIYIFTQQPPYLSLGX 564
           IK+VK ETWE +I+DT+F+A+VFLVAI+L++DYHLA+WY++ F VI+I  QQP Y  LG 
Sbjct: 66  IKVVKEETWEGFISDTLFFAKVFLVAISLIMDYHLALWYIVVFSVIFILAQQPAYEGLGT 125

Query: 563 XXXXXXXXXXXXXXEGRTSKYWLVEFRVLSSSNCIRTSRIFPELSITFSNKNLSFGTVDI 384
                         EG TS++WLVEFR L S  CIRTS  FP+LSIT+SNKNLSFG VD+
Sbjct: 126 SKKLTPLQLEALLTEGNTSRFWLVEFRALCSPTCIRTSLFFPDLSITYSNKNLSFGIVDL 185

Query: 383 GLFPNAAQKFGIPLGNS-KQLPTYILFENAEDVARFPLLNMETKASIPVVTKKLLCRHFE 207
           GLFPN A+KFGI +G S  QLPTYILFENA +V RFP L+ E KAS P +TKKLLCRHFE
Sbjct: 186 GLFPNVAEKFGISVGGSMAQLPTYILFENAVEVTRFPELDFEAKASHPPITKKLLCRHFE 245

Query: 206 LDKRLLDYVNGK 171
           LD+RLL+Y+ G+
Sbjct: 246 LDRRLLEYIKGR 257


>ref|XP_002516513.1| conserved hypothetical protein [Ricinus communis]
           gi|223544333|gb|EEF45854.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score =  300 bits (767), Expect = 5e-79
 Identities = 147/257 (57%), Positives = 188/257 (73%), Gaps = 1/257 (0%)
 Frame = -1

Query: 938 NINNYSPPKMLNLMVSEPYFLFHFLVFFSYIPIRLSASNVFSPHFSFHLLHREIQGLLAF 759
           N  + +P + +N MVSEPY+LFHFL FFSY+ +R+S+S++ SP  + HLL+RE Q  LA 
Sbjct: 7   NSGSCNPMEWVNKMVSEPYYLFHFLAFFSYLVVRISSSSLLSPPIAHHLLYREFQAFLAL 66

Query: 758 CTLAAIKMVKVETWEAYIADTMFYAEVFLVAIALVLDYHLAIWYMLAFLVIYIFTQQPPY 579
             LA+IK+VK ETWEA+IAD +FYA++ LVA++L+LDYHL +WY++ F VIYI TQQP Y
Sbjct: 67  SVLASIKLVKEETWEAFIADVLFYAKLLLVAVSLILDYHLTLWYIMVFSVIYIVTQQPAY 126

Query: 578 LSLGXXXXXXXXXXXXXXXEGRTSKYWLVEFRVLSSSNCIRTSRIFPELSITFSNKNLSF 399
             LG               EG TS++WLVEFR L SS CIR SR FPELSI +SNKNLSF
Sbjct: 127 EGLGTASKLTPLQLETLLTEGNTSRFWLVEFRALCSSTCIRASRCFPELSIIYSNKNLSF 186

Query: 398 GTVDIGLFPNAAQKFGIPL-GNSKQLPTYILFENAEDVARFPLLNMETKASIPVVTKKLL 222
           G VD+G+FPNAA+KFGI L G   QLPTY+L ENA +V RFP  + E K+S    TKKLL
Sbjct: 187 GIVDLGVFPNAAEKFGISLSGGMSQLPTYVLVENAAEVTRFPEWDFEAKSSHLPATKKLL 246

Query: 221 CRHFELDKRLLDYVNGK 171
            +HFELD+ L++Y++GK
Sbjct: 247 SKHFELDRHLVEYLHGK 263


>ref|XP_002309539.1| predicted protein [Populus trichocarpa] gi|118487276|gb|ABK95466.1|
           unknown [Populus trichocarpa]
           gi|222855515|gb|EEE93062.1| predicted protein [Populus
           trichocarpa]
          Length = 247

 Score =  287 bits (735), Expect = 3e-75
 Identities = 143/241 (59%), Positives = 177/241 (73%), Gaps = 1/241 (0%)
 Frame = -1

Query: 896 VSEPYFLFHFLVFFSYIPIRLSASNVFSPHFSFHLLHREIQGLLAFCTLAAIKMVKVETW 717
           +SEPY+L HFL FFSY+  R SA+++ SPH    L +REIQ +LAF  LA  K+V+ ETW
Sbjct: 6   LSEPYYLLHFLTFFSYLITRTSATSLLSPHLIHRLFYREIQAVLAFALLATYKIVRDETW 65

Query: 716 EAYIADTMFYAEVFLVAIALVLDYHLAIWYMLAFLVIYIFTQQPPYLSLGXXXXXXXXXX 537
           EA+I++ +F+A++FLVAI+L++DYHLA+WYM+ F VIY+ TQ P +  LG          
Sbjct: 66  EAFISNMLFFAKIFLVAISLIMDYHLALWYMVVFSVIYLITQPPAFEGLGTSSKLTPLQL 125

Query: 536 XXXXXEGRTSKYWLVEFRVLSSSNCIRTSRIFPELSITFSNKNLSFGTVDIGLFPNAAQK 357
                EG TS++WLVEFR L SS CI  SR FPELSIT+SNKNLSFG VD+GLFPNAA+K
Sbjct: 126 ETLLTEGNTSRFWLVEFRALCSSACIHASRCFPELSITYSNKNLSFGIVDLGLFPNAAEK 185

Query: 356 FGIPL-GNSKQLPTYILFENAEDVARFPLLNMETKASIPVVTKKLLCRHFELDKRLLDYV 180
           FGI L G   QLPTYILFENA +V RFP  + E KAS P VTK++L RHFELD+ LL YV
Sbjct: 186 FGISLSGGMDQLPTYILFENATEVTRFPEWDYEAKASHPPVTKRVLSRHFELDRHLLGYV 245

Query: 179 N 177
           N
Sbjct: 246 N 246


>ref|XP_003550119.1| PREDICTED: thioredoxin-related transmembrane protein 2 [Glycine
           max]
          Length = 262

 Score =  279 bits (714), Expect = 7e-73
 Identities = 142/247 (57%), Positives = 177/247 (71%), Gaps = 1/247 (0%)
 Frame = -1

Query: 908 LNLMVSEPYFLFHFLVFFSYIPIRLSASNVFSPHFSFHLLHREIQGLLAFCTLAAIKMVK 729
           LN MVSEPY+LFHFL FFSY  +R SA+ + +PH + HLL REIQ LL F  LA IK +K
Sbjct: 16  LNRMVSEPYYLFHFLTFFSYFVVRSSATQILAPHLTHHLLRREIQTLLVFAILAFIKGIK 75

Query: 728 VETWEAYIADTMFYAEVFLVAIALVLDYHLAIWYMLAFLVIYIFTQQPPYLSLGXXXXXX 549
            ETWEA+IAD +F A++ L  +A  +D  LA+WY+L FLVI++ TQQPP+  LG      
Sbjct: 76  EETWEAFIADVLFLAKICLFLLAFTMDRRLAVWYILVFLVIHMLTQQPPFQGLGTSSKLT 135

Query: 548 XXXXXXXXXEGRTSKYWLVEFRVLSSSNCIRTSRIFPELSITFSNKNLSFGTVDIGLFPN 369
                    EG T++ WLVEFR   S  CIR+S+ FPELSIT+S+KNLSFG VD+GLFPN
Sbjct: 136 PLQLESLLTEGTTTRLWLVEFRSSYSPACIRSSQQFPELSITYSSKNLSFGIVDLGLFPN 195

Query: 368 AAQKFGIPL-GNSKQLPTYILFENAEDVARFPLLNMETKASIPVVTKKLLCRHFELDKRL 192
           AA++FGI L G+  QLPT+ILFENA +VARFP L+ E     P +TK LL RHFELD+ L
Sbjct: 196 AAERFGISLSGSMGQLPTFILFENAAEVARFPELDFEAAYFHPKITKGLLSRHFELDRHL 255

Query: 191 LDYVNGK 171
           L+YV+GK
Sbjct: 256 LEYVSGK 262


Top